BAC Information

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BAC

Clone NameB6Ng01-242N22
Chromosome14 (Build37)
Map Location 100,363,505 - 100,364,643
singlet/doubletsinglet
Overlap geneKlf12
Upstream geneLOC100043787, 2410129H14Rik, 6720463M24Rik, Dis3, D14Ertd581e, LOC100043395, LOC100043397, Klf5, LOC100043400, LOC100043789, LOC668671, LOC668672, EG546623
Downstream geneLOC100043413, EG668683, EG668684
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-242N22.bB6Ng01-242N22.g
ACCGA052401GA052402
length1,1381,173
definitionB6Ng01-242N22.b B6Ng01-242N22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctctgaattctcatttctgtctctcaagtctctcagatccaat
gggattggaggaatagttaataatgcaaaagttgtcactagcacctctaa
tcctgctgggaatttctgtgaggagcctacaatgggaagtcaaggcctta
tatcctcacacatacagagtgttgctacactccaataatctgcctccatt
cagagccaacagttgaaactacttgaaatggtctaaaaaccaaatacaaa
tatgaacacattttaacagaagcaaaacctcatttgacaaaaattaaaat
gattggatggacaaagtaatctctgtattggatctaagagcacaaggtgg
ccttctttgttgccagtgtggacccacccccaccccaccccacactgcag
agctgtgctaaatggtcattacagagcctagtggtgggcatgcacatctg
cctgcatgtgcctttgaaatgtgtgtgtattcttttctacacaccctcat
tttgtctcttcattgagctccataatgactcaaagagtaagagaatggac
aagaccactctcataaaggacctgtgcatttgggctgagctagtcctcta
ccccatgcttctacatcagttattctgaaatgcaagattcaaagctagtt
caatcaaatgaagccccagaaggcatataattgcctgcacctgccagatt
tgctctagtgatcattttcagcagggggaaaaaaatgtgttagaggagcc
aatagatatgtagcaaactataattttgcagattacaagttaaataggga
aataactaaataagagtgatttatagaaggaggactaagaaagtgctgag
agattaagctcagctattttgctgaataaggaaattagccagatagtttg
tgaaataaaatgcatgtggactggtagggagagggctgacatgccagttc
ccaacttccctctcattgagatggcttctaggttcttctgctcagcttgt
ctccatctgttgtcactgatttcttgtagatttagacaccaaatattttc
cacctccagagaacagacttttaacctgatcaatggagccatgtctgatt
ggttccataatgaaatgttaatgtgatggctaattttt
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcagcatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcatggatgtggagaaagaggaacactcctccatttttggtg
ggattgcaggcttgtacaaccactatggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaagaacacatgctccactat
gttcatagcagccttatttataatagccagaagctggagagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtggaaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagacga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaacgctgacaccattgcatacactagcaagattttatcgaaa
gggcccagatatagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggaggagctagagaaagtacccaaggagctaaagggattctgcaccct
ataggtggaccacattatgaactaacagtaccccggagctctgactctag
ctgcatatgtatcaagaatgtctagtcggcatcactggaaggaagtccat
ggactgccaactaatgctagttacagggcatgccaaggtcaaaacggggg
aagtgtcggttgcgtggtactga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_100363505_100364643
seq2: B6Ng01-242N22.b_46_1183 (reverse)

seq1  -AAAAATAACCATCACA-TAACATTTCATTATGGGACCAATCAAGACATG  48
       |||| || |||||||| |||||||||||||||| ||||||| |||||||
seq2  AAAAATTAGCCATCACATTAACATTTCATTATGGAACCAATC-AGACATG  49

seq1  GCTCCAATGATCAGTTAAAAAGTCCTTGTTCTCTGGAGGTGG-AAATATT  97
      |||||| ||||||| | |||||||  |||||||||||||||| |||||||
seq2  GCTCCATTGATCAGGTTAAAAGTC--TGTTCTCTGGAGGTGGAAAATATT  97

seq1  TGGTGTCTTAAATCTACAAGGAAATCAGTGGACAACAGATGGAGACAAGC  147
      ||||||| ||||||||||| ||||||||| ||||||||||||||||||||
seq2  TGGTGTC-TAAATCTACAA-GAAATCAGT-GACAACAGATGGAGACAAGC  144

seq1  TGAGCAGAAGAACCTAGAAGCCATCTCAATGAGAGGG-AGGTGGGAACTG  196
      ||||||||||||||||||||||||||||||||||||| || |||||||||
seq2  TGAGCAGAAGAACCTAGAAGCCATCTCAATGAGAGGGAAGTTGGGAACTG  194

seq1  GCATGTCAGCCCTCTCCCTACCAGTCCACATGCATTTTATTTCACAAACT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTCAGCCCTCTCCCTACCAGTCCACATGCATTTTATTTCACAAACT  244

seq1  ATCTGGCTAATTCCCTTATTCAGCAAAATAGCTG-GCTTAATCTCTCAGC  295
      |||||||||||| ||||||||||||||||||||| |||||||||||||||
seq2  ATCTGGCTAATTTCCTTATTCAGCAAAATAGCTGAGCTTAATCTCTCAGC  294

seq1  ACTTTCTTAGTCCTCCTTCTATAAATCACTCTTATTTAGTTATTTCCCTA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTTAGTCCTCCTTCTATAAATCACTCTTATTTAGTTATTTCCCTA  344

seq1  TTTAACTTGTAATCTGCAAAATTATAGTTTGCTACATATCTATTGGCTCC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACTTGTAATCTGCAAAATTATAGTTTGCTACATATCTATTGGCTCC  394

seq1  TCTAACACATTTTTTTCCCCCTGCTGAAAATGATCACTAGAGCAAATCTG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACACATTTTTTTCCCCCTGCTGAAAATGATCACTAGAGCAAATCTG  444

seq1  GCAGGTGCAGGCAATTATATGCCTTCTGGGGCTTCATTTGATTGAACTAG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTGCAGGCAATTATATGCCTTCTGGGGCTTCATTTGATTGAACTAG  494

seq1  CTTTGAATCTTGCATTTCAGAATAACTGATGTAGAAGCATGGGGTAGAGG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAATCTTGCATTTCAGAATAACTGATGTAGAAGCATGGGGTAGAGG  544

seq1  ACTAGCTCAGCCCAAATGCACAGGTCCTTTATGAGAGTGGTCTTGTCCAT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGCTCAGCCCAAATGCACAGGTCCTTTATGAGAGTGGTCTTGTCCAT  594

seq1  TCTCTTACTCTTTGAGTCATTATGGAGCTCAATGAAGAGACAAAATGAGG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTACTCTTTGAGTCATTATGGAGCTCAATGAAGAGACAAAATGAGG  644

seq1  GTGTGTAGAAAAGAATACACACACATTTCAAAGGCACATGCAGGCAGATG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTAGAAAAGAATACACACACATTTCAAAGGCACATGCAGGCAGATG  694

seq1  TGCATGCCCACCACTAGGCTCTGTAATGACCATTTAGCACAGCTCTGCAG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGCCCACCACTAGGCTCTGTAATGACCATTTAGCACAGCTCTGCAG  744

seq1  TGTGGGGTGGGGTGGGGGTGGGTCCACACTGGCAACAAAGAAGGCCACCT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGGTGGGGTGGGGGTGGGTCCACACTGGCAACAAAGAAGGCCACCT  794

seq1  TGTGCTCTTAGATCCAATACAGAGATTACTTTGTCCATCCAATCATTTTA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTCTTAGATCCAATACAGAGATTACTTTGTCCATCCAATCATTTTA  844

seq1  ATTTTTGTCAAATGAGGTTTTGCTTCTGTTAAAATGTGTTCATATTTGTA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGTCAAATGAGGTTTTGCTTCTGTTAAAATGTGTTCATATTTGTA  894

seq1  TTTGGTTTTTAGACCATTTCAAGTAGTTTCAACTGTTGGCTCTGAATGGA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTTTTAGACCATTTCAAGTAGTTTCAACTGTTGGCTCTGAATGGA  944

seq1  GGCAGATTATTGGAGTGTAGCAACACTCTGTATGTGTGAGGATATAAGGC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGATTATTGGAGTGTAGCAACACTCTGTATGTGTGAGGATATAAGGC  994

seq1  CTTGACTTCCCATTGTAGGCTCCTCACAGAAATTCCCAGCAGGATTAGAG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACTTCCCATTGTAGGCTCCTCACAGAAATTCCCAGCAGGATTAGAG  1044

seq1  GTGCTAGTGACAACTTTTGCATTATTAACTATTCCTCCAATCCCATTGGA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTAGTGACAACTTTTGCATTATTAACTATTCCTCCAATCCCATTGGA  1094

seq1  TCTGAGAGACTTGAGAGACAGAAATGAGAATTCAGAGAGAATTC  1139
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGAGACTTGAGAGACAGAAATGAGAATTCAGAGAGAATTC  1138