BAC Information

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BAC

Clone NameB6Ng01-243L12
Chromosome14 (Build37)
Map Location 96,962,046 - 96,963,180
singlet/doubletsinglet
Overlap genenone
Upstream gene4921530L21Rik, Klhl1
Downstream geneLOC100043366, LOC668654
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-243L12.bB6Ng01-243L12.g
ACCGA053028GA053029
length1,1881,130
definitionB6Ng01-243L12.b B6Ng01-243L12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacttcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaataggaacactactccactgttggtg
ggattgcaaacttgtacaaccaatctggaaatcagtctggtggttcctca
gaaaattggacatagtactactactggaggatcccgcaataactgggcat
atatccagaagatgttccaaccggtaagaaggacacatgctccactatgt
tcatagtagccttatttataatagccagaagctggaaagaacccagatgc
ccctcaacagaggatagttacagaaaatatggtacatttacacaatggag
tactacttagctattaaaaagaattaatttaaaaaattcctaggcaaatg
aatggacctggaaggcatcatcctgagtgaggtaacccaatcacaaagga
actcacccaatgtgtactcactgataagtggatattagcccagaaactta
ggatacccaagatataagatacaatttgctaaacgcatgaaactctagaa
gaacttagaccaaactgtggacactttaccccttcttagaaatgggaaca
aaacacccatggaaggagttacagagacaaagtttcgaactgtgacagaa
gcatggaccatttagagactgccatatccagggatccatcccatatccag
ccccaaatgctgtcaccattgcatacactagcaagattttgtttaatgga
cccagatatagctgtctcttgtgagactatgctggggcctagcaaacaaa
gaagtggattctcacagtcaactattggatggatcacaggcccccaatgg
aggagctagagaaagtacccaaagagctaaagggatctgcaacctatggt
ggaaaaacattatgaactaaccagtaacctggagctcttgactctagctg
catatgtatcaaaagatggcctagtcggccatcactgatgagagccatga
actgcaaccttatatgcccagttacagggaatgccaagccaaaatggatt
gggtgagtatgggaactgggtgaaggtattcgccccct

gaattctttcaggactcacacaagaaaccgtgttgctaacagcagaatat
aatgacatgaattctgtgtgacattctaattgccattcaatgtggcacag
ccctgaagcatttcactttcacattaggatgtgatcactaaaagaagcca
ctcccaatttctcccatttacaatccagtggaaattttaaatgcaatctc
atagattattctacttttgtagacagtttcacactgagtttctagttcgt
gtgtacagccaacatttgaaataaaatactttgccacttcatattttgta
gtcacagaaatattagaaaagccatacaaattatatcttctcataaaatt
aggatgaggtccctatacgttctgttgaaatgatagtagttctgttatta
tcttgaacagatttctttcatattaaaaaaatcgaacatgaaatattctg
aaaatatgcactaaaattgaagtacattttactcagcgataacacaatgc
ttacatgaattaaaattcaaactaaaagtgcatcatctaaaagaatataa
acaacttagaaccagcaactaaatacccagacaccagcatggtgctttcc
ataccagagctttaaacatcattgcatctctcattattttctgactttca
gcccatctctttgagtgtggagcccaacctctcctgtggggaatctttgt
tcctcaggctcttgctttgagacctcatgaacctacaaacaaaaaaagaa
caattctttctgcccacacagttgcatattcccaacggaggtaatcattg
atcatctgtatggggtggaagaaggatcatctctaagaaaagcccgctgt
gaggtctagaaatatgttggttctgtagtagaaaatttactataacagca
atctggccataatctacacattccaatttagcagtcttgaagcaactttg
caatgttagagccacaaaattccatttagcataccaaaagcatttttttt
tattgggatactttcatttagaaagttttagtctgtgtatgctaccagtt
tctttaaatatgaagtatgttggtagtcacaaggagccttcattacggat
tactctcaatacaggtaagctctcttactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_96962046_96963180
seq2: B6Ng01-243L12.g_65_1194

seq1  GAATTCTTTCAGGACTCACACAAGAAACCGTGTTGCTAACAGCAGAATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCAGGACTCACACAAGAAACCGTGTTGCTAACAGCAGAATAT  50

seq1  AATGACATGAATTCTGTGTGACATTCTAATTGCCATTCAATGTGGCACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACATGAATTCTGTGTGACATTCTAATTGCCATTCAATGTGGCACAG  100

seq1  CCCTGAAGCATTTCACTTTCACATTAGGATGTGATCACTAAAAGAAGCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAAGCATTTCACTTTCACATTAGGATGTGATCACTAAAAGAAGCCA  150

seq1  CTCCCAATTTCTCCCATTTACAATCCAGTGGAAATTTTAAATGCAATCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAATTTCTCCCATTTACAATCCAGTGGAAATTTTAAATGCAATCTC  200

seq1  ATAGATTATTCTACTTTTGTAGACAGTTTCACACTGAGTTTCTAGTTCGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATTATTCTACTTTTGTAGACAGTTTCACACTGAGTTTCTAGTTCGT  250

seq1  GTGTACAGCCAACATTTGAAATAAAATACTTTGCCACTTCATATTTTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTACAGCCAACATTTGAAATAAAATACTTTGCCACTTCATATTTTGTA  300

seq1  GTCACAGAAATATTAGAAAAGCCATACAAATTATATCTTCTCATAAAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAGAAATATTAGAAAAGCCATACAAATTATATCTTCTCATAAAATT  350

seq1  AGGATGAGGTCCCTATACGTTCTGTTGAAATGATAGTAGTTCTGTTATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGAGGTCCCTATACGTTCTGTTGAAATGATAGTAGTTCTGTTATTA  400

seq1  TCTTGAACAGATTTCTTTCATATTAAAAAAATCGAACATGAAATATTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAACAGATTTCTTTCATATTAAAAAAATCGAACATGAAATATTCTG  450

seq1  AAAATATGCACTAAAATTGAAGTACATTTTACTCAGCGATAACACAATGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATGCACTAAAATTGAAGTACATTTTACTCAGCGATAACACAATGC  500

seq1  TTACATGAATTAAAATTCAAACTAAAAGTGCATCATCTAAAAGAATATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATGAATTAAAATTCAAACTAAAAGTGCATCATCTAAAAGAATATAA  550

seq1  ACAACTTAGAACCAGCAACTAAATACCCAGACACCAGCATGGTGCTTTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTTAGAACCAGCAACTAAATACCCAGACACCAGCATGGTGCTTTCC  600

seq1  ATACCAGAGCTTTAAACATCATTGCATCTCTCATTATTTTCTGACTTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCAGAGCTTTAAACATCATTGCATCTCTCATTATTTTCTGACTTTCA  650

seq1  GCCCATCTCTTTGAGTGTGGAGCCCAACCTCTCCTGTGGGGAATCTTTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATCTCTTTGAGTGTGGAGCCCAACCTCTCCTGTGGGGAATCTTTGT  700

seq1  TCCTCAGGCTCTTGCTTTGAGACCTCATGAACCTACAAACAAAAAAAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAGGCTCTTGCTTTGAGACCTCATGAACCTACAAACAAAAAAAGAA  750

seq1  CAATTCTTTCTGCCCACACAGTTGCATATTCCCAACGGAGGTAATCATTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCTTTCTGCCCACACAGTTGCATATTCCCAACGGAGGTAATCATTG  800

seq1  ATCATCTGTATGGGGTGGAAGAAGGATCATCTCTAAGAAAAGCCCGCTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCTGTATGGGGTGGAAGAAGGATCATCTCTAAGAAAAGCCCGCTGT  850

seq1  GAGGTCTAGAAATATGTTGGTTCTGTAGTAGAAAATTTACTATAACAGCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCTAGAAATATGTTGGTTCTGTAGTAGAAAATTTACTATAACAGCA  900

seq1  ATCTGGCCATAATCTACACATTCCAA-TTAGCAGTCTTGAAGCAACTTTG  949
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ATCTGGCCATAATCTACACATTCCAATTTAGCAGTCTTGAAGCAACTTTG  950

seq1  CAAATGTTAGAGCCACAAAAATTCCATTTAGCATACCAAAAGCATTTTTT  999
      | |||||||||||||| |||||||||||||||||||||||||||||||||
seq2  C-AATGTTAGAGCCAC-AAAATTCCATTTAGCATACCAAAAGCATTTTTT  998

seq1  TTAATTGGGATACTTTCATTTAGAAAAGTTTTAGTCTGTGTAATGCTACC  1049
      || |||||||||||||||||||| ||||||||||||||||| ||||||||
seq2  TTTATTGGGATACTTTCATTTAG-AAAGTTTTAGTCTGTGT-ATGCTACC  1046

seq1  AGTTTCTTTAAATATGAGAGTATGTTTGTTAGTTCACCAGGAGCC-TCAT  1098
      ||||||||||||||||| |||||| ||| ||| |||| ||||||| ||||
seq2  AGTTTCTTTAAATATGA-AGTATG-TTGGTAG-TCACAAGGAGCCTTCAT  1093

seq1  TACAGATAACTCTCATTACA-GTAAACTCTCTTTACTT  1135
      ||| ||| ||||||| |||| |||| ||||| ||||||
seq2  TACGGATTACTCTCAATACAGGTAAGCTCTC-TTACTT  1130


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