BAC Information

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BAC

Clone NameB6Ng01-244B11
Chromosome14 (Build37)
Map Location 100,564,073 - 100,723,154
singlet/doubletdoublet
Overlap genenone
Upstream geneD14Ertd581e, LOC100043395, LOC100043397, Klf5, LOC100043400, LOC100043789, LOC668671, LOC668672, EG546623, Klf12
Downstream geneLOC100043413, EG668683, EG668684, 1700110M21Rik, LOC100043421
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-244B11.bB6Ng01-244B11.g
ACCGA053311GA053312
length6581,159
definitionB6Ng01-244B11.b B6Ng01-244B11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(100,564,073 - 100,564,730)(100,722,004 - 100,723,154)
sequence
gaattcaaaatacctcgaggagtacttgaagtgctgctgtggcagctgtg
ctttgggaaagtactgtgacatcaggaagtggtaaggaccaggtatatga
gctgtcatataactatgtcttcatagaagctggacatgaaggaggaaaac
cactgcatttcaagaacaccaaatagataacaatcggccagataacaatt
gggagtgggactgttgtcacagttagggttactattgctatcatgaaacc
ccatgacaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaccttgga
aaggaaagggtttattcagcttatgctttcccatcacagttcatcatcaa
aggaagtcaggtcaaaaactgaagcagggaaagccacctggaagcagcag
ctgatgcaaagccacagaggggcgctgcttactggcttgttccctatggc
ttatctttcctttgagcctatctttgtatagaacccatgaccaccattcc
agggtggcatcgcccacaattggcaaggcttctcccaccaatcactgatt
aagaagatgtaaaatgccacttgagatgtcatgtttggtatccctgggag
gcctgcacttttctgaagggaaatggaggaggagtggatctcggggagag
gggaagtg
gaattcctcactgagtatcttgaatccatttatgtttccaaaaactgaag
tataaattgacgaataccctatttgtacccactttaaatgacattgatat
tttaataataataaggaaaggtttgttaaacccttttgatacaaatgcca
gaagcaatgaggcacagtggaagggaaaattcaaccaaggattaaattac
aaatgagattaagaataaagtcatagtaactgatatagtttagctagttt
gattaatatgagtttctttttgaggaatgcgttcttgactctcaggtgga
ctttggcacttcatatgtctcagactcactaaattttgtaactttcactt
tgaataccatcaaccatgatatggtcaagtgagaagaaacaggagatcaa
gaagtatgtcattttacaaactgaaagattttaatacattttctttattg
tcataactctagttacaaacagaatccgaaaaagggaaatgtttcctctc
aaccttaagcaggtctccatgcacctaacaccaaacctctaggccagtgg
ttttcaactttcctcatgctgagaccatttattacagttcctcatgttgt
ggtaacacccccaaccagaaaattattttgttgctacttcataactgtaa
ttttgctacttttatgaataataatgtaaatatagtacatgcaagatgtc
tgatatgtgaaccctaaagggtggcaacccacagattgagaagcactgct
ctaagcttttgtcctctcctactgaccctttgtaaacaaggtataccaga
tgtccccagggttgcctcatttccatgggacatatttggggttacagaca
aacagtcagccacagtcaggagcactctttgctggagaacttctatgtga
agtcagaggccagataaaaagggaaaacagagggaaaagattaaacaatg
tttcaaaggtcagagtgtcagaacgttggaagtagagattggaaatttta
tttaaaggacaaacaagatccaagagagcaagaagaaggattcaatatgt
agggctagttgaatgaataaggaactttggcctttgttttgtgtgcagtc
caattctgtatattgcaaaggcaaaacttagccactattatctccttaag
aggggagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_100564073_100564730
seq2: B6Ng01-244B11.b_48_705

seq1  GAATTCAAAATACCTCGAGGAGTACTTGAAGTGCTGCTGTGGCAGCTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAATACCTCGAGGAGTACTTGAAGTGCTGCTGTGGCAGCTGTG  50

seq1  CTTTGGGAAAGTACTGTGACATCAGGAAGTGGTAAGGACCAGGTATATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGGAAAGTACTGTGACATCAGGAAGTGGTAAGGACCAGGTATATGA  100

seq1  GCTGTCATATAACTATGTCTTCATAGAAGCTGGACATGAAGGAGGAAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCATATAACTATGTCTTCATAGAAGCTGGACATGAAGGAGGAAAAC  150

seq1  CACTGCATTTCAAGAACACCAAATAGATAACAATCGGCCAGATAACAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCATTTCAAGAACACCAAATAGATAACAATCGGCCAGATAACAATT  200

seq1  GGGAGTGGGACTGTTGTCACAGTTAGGGTTACTATTGCTATCATGAAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTGGGACTGTTGTCACAGTTAGGGTTACTATTGCTATCATGAAACC  250

seq1  CCATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CCATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCTTGGA  300

seq1  AAGGAAAGGGTTTATTCAGCTTATGCTTTCCCATCACAGTTCATCATCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAGGGTTTATTCAGCTTATGCTTTCCCATCACAGTTCATCATCAA  350

seq1  AGGAAGTCAGGTCAGAAACTGAAGCAGGGAAAGCCACCTGGAAGCAGCAG  400
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AGGAAGTCAGGTCAAAAACTGAAGCAGGGAAAGCCACCTGGAAGCAGCAG  400

seq1  CTGATGCAGAGCCACAGAGGGGCGCTGCTTACTGGCTTGTTCCCTATGGC  450
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGCAAAGCCACAGAGGGGCGCTGCTTACTGGCTTGTTCCCTATGGC  450

seq1  TTATCTTTCCTTTGAGCCTATCTTTGTATAGAACCCATGACCACCATTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTTTCCTTTGAGCCTATCTTTGTATAGAACCCATGACCACCATTCC  500

seq1  AGGGTGGCATCGCCCACAATTGGCAAGGCTTCTCCCACCAATCACTGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGGCATCGCCCACAATTGGCAAGGCTTCTCCCACCAATCACTGATT  550

seq1  AAGAAGATGTAAAATGCCACTTGAGATGTCATGTTTGGTATCCCTGGGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGATGTAAAATGCCACTTGAGATGTCATGTTTGGTATCCCTGGGAG  600

seq1  GCCTGCACTTTTCTGAAGGGAAATGGAGGAGGAGTGGATCTCGGGGAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCACTTTTCTGAAGGGAAATGGAGGAGGAGTGGATCTCGGGGAGAG  650

seq1  GGGAAGTG  658
      ||||||||
seq2  GGGAAGTG  658

seq1: chr14_100722004_100723154
seq2: B6Ng01-244B11.g_67_1225 (reverse)

seq1  ATCT-CCCTCTTTA-GAGATATTTGTGGCTAATGTTGTGCCTTTGCAATT  48
      |||| ||||||| | |||||| | |||||||| ||| ||||||||||| |
seq2  ATCTCCCCTCTTAAGGAGATAATAGTGGCTAA-GTTTTGCCTTTGCAA-T  48

seq1  ATACAGAATT-GACTGCACAC-AAACAAA-GCCATAGTTTCTTTTTTCAT  95
      |||||||||| |||||||||| ||||||| |||| || ||| || |||||
seq2  ATACAGAATTGGACTGCACACAAAACAAAGGCCAAAG-TTCCTTATTCAT  97

seq1  CAAACTAGCCCTACATATTGATTCCTTTCTC-TGCTCTCTTTGGATCTTT  144
        ||||||||||||||||||| |||||  || ||||||| ||||||||| 
seq2  TCAACTAGCCCTACATATTGAATCCTTCTTCTTGCTCTC-TTGGATCTT-  145

seq1  GTTTTGTCCTTT-AATAAA--TTCCAATCTCTACTTCC-ACGTTCTGACA  190
        |||||||||| ||||||  ||||||||||||||||| |||||||||||
seq2  -GTTTGTCCTTTAAATAAAATTTCCAATCTCTACTTCCAACGTTCTGACA  194

seq1  CTCTGA-CTTTG-AACATTGTTTATTCTTTTCCCTCTGTTTT-CCTTTTT  237
      |||||| ||||| ||||||||||| ||||||||||||||||| |||||||
seq2  CTCTGACCTTTGAAACATTGTTTAATCTTTTCCCTCTGTTTTCCCTTTTT  244

seq1  ATCTGGCCTCTGACTTCACATAGAAGTTCTCCAGCAAAGAGTGCTCCTGA  287
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGCCTCTGACTTCACATAGAAGTTCTCCAGCAAAGAGTGCTCCTGA  294

seq1  CTGTGGCTGACTGTTTGTCTGTAACCCC-AATATGTCCCATGGAAATGAG  336
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CTGTGGCTGACTGTTTGTCTGTAACCCCAAATATGTCCCATGGAAATGAG  344

seq1  GCAACCCTGGGGACATCTGGTATACCTTGTTTACAAAGGGTCAGTAGGAG  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCCTGGGGACATCTGGTATACCTTGTTTACAAAGGGTCAGTAGGAG  394

seq1  AGGACAAAAGCTTAGAGCAGTGCTTCTCAATCTGTGGGTTGCCACCCTTT  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAAAAGCTTAGAGCAGTGCTTCTCAATCTGTGGGTTGCCACCCTTT  444

seq1  AGGGTTCACATATCAGACATCTTGCATGTACTATATTTACATTATTATTC  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTCACATATCAGACATCTTGCATGTACTATATTTACATTATTATTC  494

seq1  ATAAAAGTAGCAAAATTACAGTTATGAAGTAGCAACAAAATAATTTTCTG  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGTAGCAAAATTACAGTTATGAAGTAGCAACAAAATAATTTTCTG  544

seq1  GTTGGGGGTGTTACCACAACATGAGGAACTGTAATAAATGGTCTCAGCAT  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGGGTGTTACCACAACATGAGGAACTGTAATAAATGGTCTCAGCAT  594

seq1  GAGGAAAGTTGAAAACCACTGGCCTAGAGGTTTGGTGTTAGGTGCATGGA  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAAGTTGAAAACCACTGGCCTAGAGGTTTGGTGTTAGGTGCATGGA  644

seq1  GACCTGCTTAAGGTTGAGAGGAAACATTTCCCTTTTTCGGATTCTGTTTG  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGCTTAAGGTTGAGAGGAAACATTTCCCTTTTTCGGATTCTGTTTG  694

seq1  TAACTAGAGTTATGACAATAAAGAAAATGTATTAAAATCTTTCAGTTTGT  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTAGAGTTATGACAATAAAGAAAATGTATTAAAATCTTTCAGTTTGT  744

seq1  AAAATGACATACTTCTTGATCTCCTGTTTCTTCTCACTTGACCATATCAT  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGACATACTTCTTGATCTCCTGTTTCTTCTCACTTGACCATATCAT  794

seq1  GGTTGATGGTATTCAAAGTGAAAGTTACAAAATTTAGTGAGTCTGAGACA  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGATGGTATTCAAAGTGAAAGTTACAAAATTTAGTGAGTCTGAGACA  844

seq1  TATGAAGTGCCAAAGTCCACCTGAGAGTCAAGAACGCATTCCTCAAAAAG  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAGTGCCAAAGTCCACCTGAGAGTCAAGAACGCATTCCTCAAAAAG  894

seq1  AAACTCATATTAATCAAACTAGCTAAACTATATCAGTTACTATGACTTTA  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCATATTAATCAAACTAGCTAAACTATATCAGTTACTATGACTTTA  944

seq1  TTCTTAATCTCATTTGTAATTTAATCCTTGGTTGAATTTTCCCTTCCACT  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAATCTCATTTGTAATTTAATCCTTGGTTGAATTTTCCCTTCCACT  994

seq1  GTGCCTCATTGCTTCTGGCATTTGTATCAAAAGGGTTTAACAAACCTTTC  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTCATTGCTTCTGGCATTTGTATCAAAAGGGTTTAACAAACCTTTC  1044

seq1  CTTATTATTATTAAAATATCAATGTCATTTAAAGTGGGTACAAATAGGGT  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTATTATTAAAATATCAATGTCATTTAAAGTGGGTACAAATAGGGT  1094

seq1  ATTCGTCAATTTATACTTCAGTTTTTGGAAACATAAATGGATTCAAGATA  1136
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCGTCAATTTATACTTCAGTTTTTGGAAACATAAATGGATTCAAGATA  1144

seq1  CTCAGTGAGGAATTC  1151
      |||||||||||||||
seq2  CTCAGTGAGGAATTC  1159