BAC Information

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BAC

Clone NameB6Ng01-244B15
Chromosome14 (Build37)
Map Location 68,539,908 - 68,541,046
singlet/doubletsinglet
Overlap geneDock5
Upstream geneLOC672614, Bnip3l, Ppp2r2a, Ebf2, EG628416, LOC100043046, LOC100043056, Cdca2, Kctd9, Gnrh1
Downstream geneNefl, Nefm, LOC100043072, Adam7, Adamdec1, Adam28, LOC641033, LOC100043082
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-244B15.bB6Ng01-244B15.g
ACCGA053319GA053320
length1,142328
definitionB6Ng01-244B15.b B6Ng01-244B15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactctgtagaccaggttggcctcgaactcagtgttggcattttc
cattcaacacaccatacctgggatacgagggtcacatggttcacaggaca
cagagtaccctgaagataaagctaccacagcgtatttcttgataccttga
ctgagtccgaaacaatctgatttccagagggaactcatctccactgcaaa
ctccttccctcacactgcctgccaggacagagagcctaagatctttagag
gaggtgaccaggggtccacctgccccctgctgtgaataatcagagttgta
ctgggcttgaaaatgggacagaagatggcttgaccagcagaaggtgctaa
caattctgacaccatttgaacccccgggaggggctgtatgaaggctccaa
gggcagaaacacaaagcccacttgtctcttgctgggatggtggctgccag
caattcagtcactggatggggcctgtcagcctgggctcagggaaggacat
tggacatcacttggaaaaacacaatgaattcatgcagttatgggctgctt
tctcagacccatttctgcctccaaacaaactcaccgaagcacttcttaag
gcttcctctcaaaacacattaatcccaaagcaagttggggcgaattataa
accaaggttaaaacatcctgaaagaactctccagatcctttaatgcctac
agagagaaagcccattgttggtggctttatctctcctataagggggaaag
tacatttccctctattgttaagaaaatggtgctttctgagacaaagtctc
attctgagtagcccaggctggcctccaactaatggccagccctctgcttc
ggcctcttgaaggatgagattccaggcgtatatcaacacagccaactctc
tactgaaatactaagtactacttaacctcagaaaatacaggcaaagggtc
aagttcattaaaagtaatttccaagcactagatcatcctttatctaccta
tcttttttttctttctttctttcttttttaagatagagcctcttcctgtg
tagttcaggcaggtccttaactcattgatcttcctggctctgcctcccaa
gtgcctaggaatatagcatttgttaaccacatcagatttttt
agcatagcgacacactattggcttattcaaacatcagcagtaaaattaca
tgtacatgcagagtgtcagagttctgtgagttgttgactcagttcagata
gtcctgttatgtcctcacattcttctttatctttaaggttaagctgttcc
cgggaatgttttaactacggggcatacccgggtttgtttttcttttttct
cagccccaggcagcctctaggctcacaaacaaccagcaatttcttagtac
tttatatgacttacaggtcttgaaatttcatctttctttcaggttggttg
gttggttggttggttgattggttggttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_68539908_68541046
seq2: B6Ng01-244B15.b_47_1188

seq1  GAATTCACTCTGTAGACCAGGTTGGCCTCGAACTCAGTGTTGGCATTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTGTAGACCAGGTTGGCCTCGAACTCAGTGTTGGCATTTTC  50

seq1  CATTCAACACACCATACCTGGGATACGAGGGTCACATGGTTCACAGGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAACACACCATACCTGGGATACGAGGGTCACATGGTTCACAGGACA  100

seq1  CAGAGTACCCTGAAGATAAAGCTACCACAGCGTATTTCTTGATACCTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTACCCTGAAGATAAAGCTACCACAGCGTATTTCTTGATACCTTGA  150

seq1  CTGAGTCCGAAACAATCTGATTTCCAGAGGGAACTCATCTCCACTGCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTCCGAAACAATCTGATTTCCAGAGGGAACTCATCTCCACTGCAAA  200

seq1  CTCCTTCCCTCACACTGCCTGCCAGGACAGAGAGCCTAAGATCTTTAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTCCCTCACACTGCCTGCCAGGACAGAGAGCCTAAGATCTTTAGAG  250

seq1  GAGGTGACCAGGGGTCCACCTGCCCCCTGCTGTGAATAATCAGAGTTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGACCAGGGGTCCACCTGCCCCCTGCTGTGAATAATCAGAGTTGTA  300

seq1  CTGGGCTTGAAAATGGGACAGAAGATGGCTTGACCAGCAGAAGGTGCTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCTTGAAAATGGGACAGAAGATGGCTTGACCAGCAGAAGGTGCTAA  350

seq1  CAATTCTGACACCATTTGAACCCCCGGGAGGGGCTGTATGAAGGCTCCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCTGACACCATTTGAACCCCCGGGAGGGGCTGTATGAAGGCTCCAA  400

seq1  GGGCAGAAACACAAAGCCCACTTGTCTCTTGCTGGGATGGTGGCTGCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGAAACACAAAGCCCACTTGTCTCTTGCTGGGATGGTGGCTGCCAG  450

seq1  CAATTCAGTCACTGGATGGGGCCTGTCAGCCTGGGCTCAGGGAAGGACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCAGTCACTGGATGGGGCCTGTCAGCCTGGGCTCAGGGAAGGACAT  500

seq1  TGGACATCACTTGGAAAAACACAATGAATTCATGCAGTTATGGGCTGCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACATCACTTGGAAAAACACAATGAATTCATGCAGTTATGGGCTGCTT  550

seq1  TCTCAGACCCATTTCTGCCTCCAAACAAACTCACCGAAGCACTTCTTAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGACCCATTTCTGCCTCCAAACAAACTCACCGAAGCACTTCTTAAG  600

seq1  GCTTCCTCTCAAAACACATTAATCCCAAAGCAAGTTGGGGCGAATTATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCTCTCAAAACACATTAATCCCAAAGCAAGTTGGGGCGAATTATAA  650

seq1  ACCAAGGTTAAAACATCCTGAAAGAACTCTCCAGATCCTTTAATGCCTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGGTTAAAACATCCTGAAAGAACTCTCCAGATCCTTTAATGCCTAC  700

seq1  AGAGAGAAAGCCCATTGTTGGTGGCTTTATCTCTCCTATAAGGGGGAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAAAGCCCATTGTTGGTGGCTTTATCTCTCCTATAAGGGGGAAAG  750

seq1  TACATTTCCCTCTATTGTTAAGAAAATGGTGCTTTCTGAGACAAAGTCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTCCCTCTATTGTTAAGAAAATGGTGCTTTCTGAGACAAAGTCTC  800

seq1  ATTCTGAGTAGCCCAGGCTGGCCTCCAACTAATGGCCAGCCCTCTGCTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGAGTAGCCCAGGCTGGCCTCCAACTAATGGCCAGCCCTCTGCTTC  850

seq1  GGCCTCTTGAAGGATGAGATTCCAGGCGTATATCAACACAGCCAACTCTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCTTGAAGGATGAGATTCCAGGCGTATATCAACACAGCCAACTCTC  900

seq1  TACTGAAATACTAAGTACTACTTAACCTCAG-AAATACAGGCAAAGGGTC  949
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TACTGAAATACTAAGTACTACTTAACCTCAGAAAATACAGGCAAAGGGTC  950

seq1  AAGTTCATTAAAAGTAATTTCAAAGCACTAGATCATCCCTTTATCTACCT  999
      ||||||||||||||||||||| |||||||||||||| |||||||||||||
seq2  AAGTTCATTAAAAGTAATTTCCAAGCACTAGATCAT-CCTTTATCTACCT  999

seq1  ATCTTTTTTTTCTTTCTTTCTTTCTTTTTTAAGATAGGAGCTCT--CTGT  1047
      |||||||||||||||||||||||||||||||||||||   ||||  ||||
seq2  ATCTTTTTTTTCTTTCTTTCTTTCTTTTTTAAGATAGAGCCTCTTCCTGT  1049

seq1  GTAGTTCAGGCAGGTCTTAAACTCA-TGATCTTCCTGCCTCTGCCTCCCC  1096
      |||||||||||||||| | |||||| ||||||||||| ||||||||||| 
seq2  GTAGTTCAGGCAGGTCCTTAACTCATTGATCTTCCTGGCTCTGCCTCCCA  1099

seq1  AGTG-CTAGGAATATAGGCATTTGTTACCCACATCCAGTTTTTT  1139
      |||| ||||||||||| |||||||||| |||||||   ||||||
seq2  AGTGCCTAGGAATATA-GCATTTGTTAACCACATCAGATTTTTT  1142