BAC Information

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BAC

Clone NameB6Ng01-246E07
Chromosome14 (Build37)
Map Location 96,887,198 - 96,888,306
singlet/doubletsinglet
Overlap geneKlhl1
Upstream gene4921530L21Rik
Downstream geneLOC100043366, LOC668654
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-246E07.bB6Ng01-246E07.g
ACCGA054929GA054930
length1,1941,096
definitionB6Ng01-246E07.b B6Ng01-246E07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgtttattcctcctagggagaacatgcattaccccagaccattc
ctcttcccgtaatctctctgattctataaattgcaggttgattaatattt
acttaatggctaaaattcactcacaaataaacacatatttgtttttctgg
gtgtgggtcacctcattcagaatgattatttttctactcccatccatttg
ccttcaaattacacaatcgagtctcaaggggaccttctcctaagaaccaa
atggggggagataaaagacggacaccaagtgcaaggaacaacacggaacc
attctggatagcatcaaggtgtccctgtattagcaaggctcaaggattaa
atgcacaagcaaaaaggggaagtacttctcagcaggaggaatggggcagt
ggaaaatttttcttttggcgactacagggggaagcaggaacttggtggta
tcagggtacatcttgaggtcaggacatccggctctgacttagggctggaa
caatctgtggttgttcttggagtggtgcgtcggtgacccgcttttgaccc
ctttttcttctcaggggaagaggccgaatttagagatcaggacaattgtg
ttgtcttaatagctcccaacaaatataaatatttgtataaatattgtata
aatagttaaacaaatgcccttgtgatatgatggagcataacctggatata
tacctaagagcagtacagtcttcttgaggtagatggaatttccaattctg
aggagttgccatattagattcgatggtggctgaacaagtttttccttcct
tgggctgagcatatactaatcataacattctactccctggccccataggc
ttattcaaatatatgagtccaaagctcaaagtttcttctgagattcatct
aatcacttaactataatcaccaagacaggaaaccagctggacaaagtcca
aactctgcatctccatgtctgatgtcaaagagtctcatatctccaacttc
ctttttgatctttgtgactgcacaaactcctttcctccttggggcctgat
ccactcctgtagccagttccctcagaaagatagccatgactttgtcatct
taaaacattttggggtctccaagtagcttaaagtttagaatcctggtcag
ttcttggattccgaaccatgatcttctcctcaattctctctcca

gaattcaccgcacctcatgcacacgatgatcatgatgatgatgatatgat
gatgataagaagacaaagaagaggaagaagaaatgtggaaaacccagcga
aattctccacattcataattttataagagtatagaaagagcttgaggaat
atactagaatataaaaatatatcccattctaatagcttggaagaattaat
atgtaaaatgaacattttgtaggatattatgaaaagacctatatacagat
aaagaataatcacagtaaaatttcagaaatcatccttaacagcagagaca
atcagtccaattaaatttaagaaacggcttatataaaaattgtttttaat
cagatattttctttatttatatttcaaatgttgtcccctttcctggtttc
ccctgcaaaagtcccctatctcttcaccccttcccctgctccccaacgct
cccacacccattcctggttctggcattcccttatactggggcatagaacc
ttcacaggacctacagcctctccgcccattgataaacaactatgccatcc
tctgctacatatgcagctagagctacaagttcttccatgtgttttctttg
attcgtgttttatttccaaggagctctggaggtactgggtagtttatatt
gatgttctgactatagggcttcaaaccccttcagctcattgggtactttc
tctagctccttcattgagaaccttgtgctccatccaatggatgattgtga
gcatccacttctatatttgccagacactggcagagcctctcaggagacag
ctatatcagctcctatctgcaaggtcttgttggcatctgccatcatgtct
gggtttggtggttgtttatgggatggatgacctatatacagattaagtaa
tcacagtaaaatttcaaaaaatcatcctttacagcagagacaatcagtcc
attaaatttaaaaaaatattataaattattttatatggtggatttaaagc
actaaattaaaagtgatctaacaaagaatattgctgaatgttgtccagac
tggtttcaattatactaagcatagcataatctgacttgctactgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_96887198_96888306
seq2: B6Ng01-246E07.g_67_1162

seq1  GAATTCACCGCA-GTCATGCACACGATGATCATGATGATGATGATATGAT  49
      ||||||||||||  ||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCGCACCTCATGCACACGATGATCATGATGATGATGATATGAT  50

seq1  GATGATAAGAAGACAAAGAAGAGGAAGAAGAAATGTGGAAAACCCAGCGA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATAAGAAGACAAAGAAGAGGAAGAAGAAATGTGGAAAACCCAGCGA  100

seq1  AATTCTCCACATTCATAATTTTATAAGAGTATAGAAAGAGCTTGAGGAAT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTCCACATTCATAATTTTATAAGAGTATAGAAAGAGCTTGAGGAAT  150

seq1  ATACTAGAATATAAAAATATATCCCATTCTAATAGCTTGGAAGAATTAAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTAGAATATAAAAATATATCCCATTCTAATAGCTTGGAAGAATTAAT  200

seq1  ATGTAAAATGAACATTTTGTAGGATATTATGAAAAGACCTATATACAGAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAAATGAACATTTTGTAGGATATTATGAAAAGACCTATATACAGAT  250

seq1  AAAGAATAATCACAGTAAAATTTCAGAAATCATCCTTAACAGCAGAGACA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATAATCACAGTAAAATTTCAGAAATCATCCTTAACAGCAGAGACA  300

seq1  ATCAGTCCAATTAAATTTAAGAAACGGCTTATATAAAAATTGTTTTTAAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTCCAATTAAATTTAAGAAACGGCTTATATAAAAATTGTTTTTAAT  350

seq1  CAGATATTTTCTTTATTTATATTTCAAATGTTGTCCCCTTTCCTGGTTTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATATTTTCTTTATTTATATTTCAAATGTTGTCCCCTTTCCTGGTTTC  400

seq1  CCCTGCAAAAGTCCCCTATCTCTTCACCCCTTCCCCTGCTCCCCAACGCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCAAAAGTCCCCTATCTCTTCACCCCTTCCCCTGCTCCCCAACGCT  450

seq1  CCCACACCCATTCCTGGTTCTGGCATTCCCTTATACTGGGGCATAGAACC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACACCCATTCCTGGTTCTGGCATTCCCTTATACTGGGGCATAGAACC  500

seq1  TTCACAGGACCTACAGCCTCTCCGCCCATTGATAAACAACTATGCCATCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAGGACCTACAGCCTCTCCGCCCATTGATAAACAACTATGCCATCC  550

seq1  TCTGCTACATATGCAGCTAGAGCTACAAGTTCTTCCATGTGTTTTCTTTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTACATATGCAGCTAGAGCTACAAGTTCTTCCATGTGTTTTCTTTG  600

seq1  ATTCGTGTTTTATTTCCAAGGAGCTCTGGAGGTACTGGGTAGTTTATATT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCGTGTTTTATTTCCAAGGAGCTCTGGAGGTACTGGGTAGTTTATATT  650

seq1  GATGTTCTGACTATAGGGCTTCAAACCCCTTCAGCTCATTGGGTACTTTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTCTGACTATAGGGCTTCAAACCCCTTCAGCTCATTGGGTACTTTC  700

seq1  TCTAGCTCCTTCATTGAGAACCTTGTGCTCCATCCAATGGATGATTGTGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCTCCTTCATTGAGAACCTTGTGCTCCATCCAATGGATGATTGTGA  750

seq1  GCATCCACTTCTATATTTGCCAGACACTGGCAGAGCCTCTCAGGAGACAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCACTTCTATATTTGCCAGACACTGGCAGAGCCTCTCAGGAGACAG  800

seq1  CTATATCAGGCTCCTATCTGCAAGGTCTTGTTGGCATCTGCCATCATGTC  849
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CTATATCA-GCTCCTATCTGCAAGGTCTTGTTGGCATCTGCCATCATGTC  849

seq1  TGGGTTTGGTGGTTGTTTATGGGATGGATGACCTATATACAGATTAAGTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TGGGTTTGGTGGTTGTTTATGGGATGGATGACCTATATACAGATTAAGT-  898

seq1  AATCACAGTAAAATTTC-AAAAATCATCCTTAACAGCAGAGACAATCAGT  948
      ||||||||||||||||| ||||||||||||| ||||||||||||||||||
seq2  AATCACAGTAAAATTTCAAAAAATCATCCTTTACAGCAGAGACAATCAGT  948

seq1  CCAATTAAATTTAAAAAAATATTTATAAA-TATTTTATATGGT-GATTTA  996
      || |||||||||||||||||| ||||||| ||||||||||||| ||||||
seq2  CC-ATTAAATTTAAAAAAATA-TTATAAATTATTTTATATGGTGGATTTA  996

seq1  AAGCACTAAATATAAAAAGTGATCATAAACAAAAAGAATATTGCAGAA-G  1045
      |||||||||  || |||||||||| ||   | |||||||||||| ||| |
seq2  AAGCACTAA--ATTAAAAGTGATC-TA---ACAAAGAATATTGCTGAATG  1040

seq1  TTGTCACAAGACCTGGTTTCAAATTATACTAAAGCCATAGCAATAAAACC  1095
      ||||  | ||| |||||||| |||||||||||   |||||||   || | 
seq2  TTGT--CCAGA-CTGGTTTC-AATTATACTAA--GCATAGCA--TAATCT  1082

seq1  AGCTTGCTACTGAC  1109
        ||||||||||||
seq2  GACTTGCTACTGAC  1096


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