BAC Information

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BAC

Clone NameB6Ng01-247D12
Chromosome14 (Build37)
Map Location 101,628,866 - 101,629,876
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043413, EG668683, EG668684, 1700110M21Rik, LOC100043421
Downstream geneLOC382936, Tbc1d4, Commd6, Uchl3, Lmo7, LOC100043795, LOC545567
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-247D12.bB6Ng01-247D12.g
ACCGA055611GA055612
length1,1921,072
definitionB6Ng01-247D12.b B6Ng01-247D12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgccaatttctgagtatatctatcccaattatacattctggaac
tggggaaatcaccacaggatgtgtccggggacctactggacctactgtga
gtcggacatcagtcaaaactccattaatcacctgccctccataagcccct
actttaactggagggccacaatgtttcttgggatcccctgggatcagtgt
caactcagaaccagtatccagcagaccccgaaaagtctgattatttcctt
ttccccagtgtacagttacccttgtaaaaggccgtaggtccctctgggga
agaactggagaaagggtaacagcaaaacctttgagtgtcttatcaagatc
cttcctcagcggaacctggccaccccttcattcaaggggttctggatctg
caaactgtctcaagtctggaaattgattcactggccgagattgctgttta
ccacgatctaatgtagcctttctttcatttggctgtttaccatgatctaa
tgtagcctttctttcatttgtttgagaatttttctgcttatacagatcaa
acaaatatgcagtaggcttcctatgtatttcattcctggaaacaccatga
tttgttagccagtaccaaaggtccaaccgagtcatgccattataaatttc
acctctcctgtgctgaccattactgggtatgttattataaacattctttt
gtctacgctgtccattataataactagaatcaccttgtctctggcgattc
aatgctgccacctggcccttgttacctcggaatccaactaaacccagtga
atttaattcatctaattgagcagaagcatctccaatgctaagatctggca
caaggaaaagggaaagaacaaaacccttcaaatgtgctggtgcccctctc
accaatttgcgtcttatagagctggtgaaaggcatatcttctggaccttt
cccattgtggacaattatgctttacacatatatccactctagcattgcaa
tttccctagtcttaaatccctttcatcaacactaagccatggatatcagg
catcttccaggtcattttcagtaaggcatcttttgatacacctcagcgac
aatcaaccaacctttttgacatctttttaactatgcgagcttccgtatga
gctagatctcttacctcgagagggaacccagtggtccagtta

gaattctataaactctttgatttcttcctttatttcttccctgaccaagt
tatcattgagtagaattgttcagtttccattactatgtgggatttctttt
gtttttcttgtctttttgaagtccagccttattctggggtgatctgagtg
aatgcatggcattattttaattttcttgtatctgttgaggcttgttttat
gtccaattatatggtcaattttggagaaggttctataaggtgctgaaaag
aaggtatattcccttgttttggggccaaatattctgttgatatctgttaa
atccatttaggtcataacttctcttagtttcactgtgtctctgattagtc
tctgtttcaatgacctgccccttggtgacagtagggtgttgaagtctcct
gcaattattgtgtgaggttcaatatgtgttttgatctttaagtttctttt
atgaatgtgggtgtcattgcatttggggcatagatattcagagttgagac
aaattttgggatcagttttgtgtgtgtttgtgtgtgtgtatgtgtgtaca
catgcatacatgtgttttcttggatttgtatgtgccataagtctacatta
gatcatttgatcactttgccccttcttgttctagacagaatcttttattt
aacccacagctttctgattggctaggctagttggctatttatccctagtg
atccctatatctgagtgggttgtaatgtaggtgcaattccacaaaacctg
gctttttccatgggtgttagagatcccaatttcaggtacacatgcctttg
taaatgggcactttgccaattaagctattgctttcagtcattaagcagag
cacgttgagatgttaaaagaatctatcttgaaagcttaaaagtttagaaa
gacccaaagaaagtgattgtagggggcagaaaaataagacagtgtgcttg
aatagatgtttcttcactagtccattatcatctgtagttctttctaggac
tagacttctataaaattggaatgtctttggaatctctggtgtggtccaaa
taatttaagagttactaatgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_101628866_101629876
seq2: B6Ng01-247D12.g_119_1139 (reverse)

seq1  ATCAATAGTAACTCTT-AATTA-TTGGACCACA-CAGAGA-TCCAAAGAC  46
      |||| ||||||||||| ||||| |||||||||| |||||| |||||||||
seq2  ATCATTAGTAACTCTTAAATTATTTGGACCACACCAGAGATTCCAAAGAC  50

seq1  ATTCCAATTTTATAG-AGTCTAGTCCTAG-AAGAACTACAGATGATAATG  94
      ||||||||||||||| ||||||||||||| ||||||||||||||||||||
seq2  ATTCCAATTTTATAGAAGTCTAGTCCTAGAAAGAACTACAGATGATAATG  100

seq1  GACTAGTGGAAAGAAACATCTATTCAAGCACACTGTCTTA-TTTTCTGCC  143
      ||||||||  |||||||||||||||||||||||||||||| |||||||||
seq2  GACTAGTG--AAGAAACATCTATTCAAGCACACTGTCTTATTTTTCTGCC  148

seq1  CCCTACAATCACTTTCTTTGGGTCTTTCTAAACTTTT-AGCTTTCAAGAT  192
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CCCTACAATCACTTTCTTTGGGTCTTTCTAAACTTTTAAGCTTTCAAGAT  198

seq1  AGATTCTTTTAACATCTCAACGTGCTCTGCTTAATGACTG-AAGCAATAG  241
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AGATTCTTTTAACATCTCAACGTGCTCTGCTTAATGACTGAAAGCAATAG  248

seq1  CTTAATTGGCAAAGTG-CCATTTACAAAGGCATGTGTACCTG-AATTGGG  289
      |||||||||||||||| ||||||||||||||||||||||||| |||||||
seq2  CTTAATTGGCAAAGTGCCCATTTACAAAGGCATGTGTACCTGAAATTGGG  298

seq1  ATCTCTAACACCCATGG-AAAAGCCAGGTTTTGTGGAATTGCACCTACAT  338
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ATCTCTAACACCCATGGAAAAAGCCAGGTTTTGTGGAATTGCACCTACAT  348

seq1  TACAACCCACTCAGATATAGGGATCACTAGGGATAAATAGCCAACTAGCC  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACCCACTCAGATATAGGGATCACTAGGGATAAATAGCCAACTAGCC  398

seq1  TAGCCAATCAGAAAGCTGTGGGTTAAATAAAAGATTCTGTCTAGAACAAG  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCAATCAGAAAGCTGTGGGTTAAATAAAAGATTCTGTCTAGAACAAG  448

seq1  AAGGGGCAAAGTGATCAAATGATCTAATGTAGACTTATGGCACATACAAA  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGCAAAGTGATCAAATGATCTAATGTAGACTTATGGCACATACAAA  498

seq1  TCCAAGAAAACACATGTATGCATGTGTACACACATACACACACACAAACA  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGAAAACACATGTATGCATGTGTACACACATACACACACACAAACA  548

seq1  CACACAAAACTGATCCCAAAATTTGTCTCAACTCTGAATATCTATGCCCC  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAAAACTGATCCCAAAATTTGTCTCAACTCTGAATATCTATGCCCC  598

seq1  AAATGCAATGACACCCACATTCATAAAAGAAACTTAAAGATCAAAACACA  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCAATGACACCCACATTCATAAAAGAAACTTAAAGATCAAAACACA  648

seq1  TATTGAACCTCACACAATAATTGCAGGAGACTTCAACACCCTACTGTCAC  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAACCTCACACAATAATTGCAGGAGACTTCAACACCCTACTGTCAC  698

seq1  CAAGGGGCAGGTCATTGAAACAGAGACTAATCAGAGACACAGTGAAACTA  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGGCAGGTCATTGAAACAGAGACTAATCAGAGACACAGTGAAACTA  748

seq1  AGAGAAGTTATGACCTAAATGGATTTAACAGATATCAACAGAATATTTGG  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGTTATGACCTAAATGGATTTAACAGATATCAACAGAATATTTGG  798

seq1  CCCCAAAACAAGGGAATATACCTTCTTTTCAGCACCTTATAGAACCTTCT  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAAACAAGGGAATATACCTTCTTTTCAGCACCTTATAGAACCTTCT  848

seq1  CCAAAATTGACCATATAATTGGACATAAAACAAGCCTCAACAGATACAAG  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAATTGACCATATAATTGGACATAAAACAAGCCTCAACAGATACAAG  898

seq1  AAAATTAAAATAATGCCATGCATTCACTCAGATCACCCCAGAATAAGGCT  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTAAAATAATGCCATGCATTCACTCAGATCACCCCAGAATAAGGCT  948

seq1  GGACTTCAAAAAGACAAGAAAAACAAAAGAAATCCCACATAGTAATGGAA  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTCAAAAAGACAAGAAAAACAAAAGAAATCCCACATAGTAATGGAA  998

seq1  ACTGAACAATTCTACTCAATGAT  1011
      |||||||||||||||||||||||
seq2  ACTGAACAATTCTACTCAATGAT  1021


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