BAC Information

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BAC

Clone NameB6Ng01-247J15
Chromosome14 (Build37)
Map Location 73,688,331 - 73,843,974
singlet/doubletdoublet
Overlap geneRb1, Itm2b
Upstream geneLOC668482, LOC675957, Fndc3a, LOC100043721, LOC100043723, LOC668487, LOC668489, Cysltr2, LOC100043149, Rcbtb2, P2ry5
Downstream geneLOC100043152, Med4, Nudt15, Sucla2, LOC100043734, EG629578, LOC629583
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-247J15.bB6Ng01-247J15.g
ACCGA055893GA055894
length1,155162
definitionB6Ng01-247J15.b B6Ng01-247J15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,688,331 - 73,689,486)(73,843,813 - 73,843,974)
sequence
gaattccagccaattggttctctctgctatataagtaaggcacacatttt
tagaagataaacaaatccaaacaggattttaccaccttaacttataaagt
agtatgtttttatcaccaaagtaaacaatatgtttgagattagtccaaaa
aaacaaattttagtgaaaaattacatgctacttacgcactgctgggttgt
gtcaaatatataagttcacacgtcctgaaaagaaaaaaataatttcagta
aaataacagcttaaaagaaaacttttaaaatacttctgcagcatgagtca
ttagccttctaaaagaaagttaaagtatatctgcttactacaaaatgcca
tctcatatcaccatgttctaagataaaagaaccggcttctgtcactcact
gttaaatcaaaaccaatgaccagaccagactgttagctcagtgggtaact
aaccaataagccacatatatctctatagtttaccctataataaacaagct
ttggcattgcaatcttcatactccagaaaactgtacaagtagaatgggaa
acggaaaccttgatttgattcaaagccaccaacttaattaaagctaaatt
attccaaaagactagtcaataaaaatcttaagttacaaagtgcagggcag
ccttgtaaggccaaatcagactatgccattccccagtgtaaaagcactca
gcatttccactgtgcagggcacagctagcttgctcctgcccagcccccat
cctaccttccatacatcagcgctcaaagcacatccagtcactgttttggt
gtgcacatgctcagcacatgcctgacacgcccagttcctgtccccactca
tttttctggatacatttctatttctaatccctattcagaacttcctcctt
ctctttttccttagtagaaatcaacagtacccgccttctcacctagctaa
gatccatgacgtactgcatcatttctacttaacgcggtactcttcaatcc
agcatcaacagccattactgcattttcacgtggacatgttgtggcatgtg
cacatgtacacatgtatgtggagcctgagactgatgtcaggatatttaat
tgtcttccatccttattctttgagggccaggatcttgattcaacttcaga
gctca
ctcatgtctctggctacttccaggcccttgatacagttgacttccactgt
aggcaacggtttggctactgcaagctgaaccagcagtgtgtagctaagaa
ggaaaaagaagaaaaacaagaaagagttgtgtatgtgtgttggggggggg
gcgcgttgttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_73688331_73689486
seq2: B6Ng01-247J15.b_46_1200

seq1  GAATTCCAGCCAATTGGTTCTCTCTGCTATATAAGTAAGGCACACATTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGCCAATTGGTTCTCTCTGCTATATAAGTAAGGCACACATTTT  50

seq1  TAGAAGATAAACAAATCCAAACAGGATTTTACCACCTTAACTTATAAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGATAAACAAATCCAAACAGGATTTTACCACCTTAACTTATAAAGT  100

seq1  AGTATGTTTTTATCACCAAAGTAAACAATATGTTTGAGATTAGTCCAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGTTTTTATCACCAAAGTAAACAATATGTTTGAGATTAGTCCAAAA  150

seq1  AAACAAATTTTAGTGAAAAATTACATGCTACTTACGCACTGCTGGGTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAATTTTAGTGAAAAATTACATGCTACTTACGCACTGCTGGGTTGT  200

seq1  GTCAAATATATAAGTTCACACGTCCTGAAAAGAAAAAAATAATTTCAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAATATATAAGTTCACACGTCCTGAAAAGAAAAAAATAATTTCAGTA  250

seq1  AAATAACAGCTTAAAAGAAAACTTTTAAAATACTTCTGCAGCATGAGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACAGCTTAAAAGAAAACTTTTAAAATACTTCTGCAGCATGAGTCA  300

seq1  TTAGCCTTCTAAAAGAAAGTTAAAGTATATCTGCTTACTACAAAATGCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCTTCTAAAAGAAAGTTAAAGTATATCTGCTTACTACAAAATGCCA  350

seq1  TCTCATATCACCATGTTCTAAGATAAAAGAACCGGCTTCTGTCACTCACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATATCACCATGTTCTAAGATAAAAGAACCGGCTTCTGTCACTCACT  400

seq1  GTTAAATCAAAACCAATGACCAGACCAGACTGTTAGCTCAGTGGGTAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAATCAAAACCAATGACCAGACCAGACTGTTAGCTCAGTGGGTAACT  450

seq1  AACCAATAAGCCACATATATCTCTATAGTTTACCCTATAATAAACAAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAATAAGCCACATATATCTCTATAGTTTACCCTATAATAAACAAGCT  500

seq1  TTGGCATTGCAATCTTCATACTCCAGAAAACTGTACAAGTAGAATGGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCATTGCAATCTTCATACTCCAGAAAACTGTACAAGTAGAATGGGAA  550

seq1  ACGGAAACCTTGATTTGATTCAAAGCCACCAACTTAATTAAAGCTAAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGAAACCTTGATTTGATTCAAAGCCACCAACTTAATTAAAGCTAAATT  600

seq1  ATTCCAAAAGACTAGTCAATAAAAATCTTAAGTTACAAAGTGCAGGGCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAAAAGACTAGTCAATAAAAATCTTAAGTTACAAAGTGCAGGGCAG  650

seq1  CCTTGTAAGGCCAAATCAGACTATGCCATTCCCCAGTGTAAAAGCACTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTAAGGCCAAATCAGACTATGCCATTCCCCAGTGTAAAAGCACTCA  700

seq1  GCATTTCCACTGTGCAGGGCACAGCTAGCTTGCTCCTGCCCAGCCCCCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTCCACTGTGCAGGGCACAGCTAGCTTGCTCCTGCCCAGCCCCCAT  750

seq1  CCTACCTTCCATACATCAGCGCTCAAAGCACATCCAGTCACTGTTTTGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCTTCCATACATCAGCGCTCAAAGCACATCCAGTCACTGTTTTGGT  800

seq1  GTGCACATGCTCAGCACATGCCTGACACGCCCAGTTCCTGTCCCCACTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACATGCTCAGCACATGCCTGACACGCCCAGTTCCTGTCCCCACTCA  850

seq1  TTTTTCTGGATACATTTCTATTTCTAATCCCTATTCAGAACTTCCTCCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTGGATACATTTCTATTTCTAATCCCTATTCAGAACTTCCTCCTT  900

seq1  CTCTTTTTCCTTAGTAGAAATCAACAGTA-CCGCCTTCTCACCTAGCTAA  949
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CTCTTTTTCCTTAGTAGAAATCAACAGTACCCGCCTTCTCACCTAGCTAA  950

seq1  GATCCATGACGTACTGCATCATTTCTACTTAAACGCGGTACTCTTCAATC  999
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GATCCATGACGTACTGCATCATTTCTACTT-AACGCGGTACTCTTCAATC  999

seq1  CAGCATC-ACAGCCATTACTGCATTTTCACGTGGACATGTTGTGGCATGT  1048
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATCAACAGCCATTACTGCATTTTCACGTGGACATGTTGTGGCATGT  1049

seq1  GCACATGTACACATGTATGTGGAGGCCTGAGACTGATGTCAGGGATATTA  1098
      ||||||||||||||||||||||| ||||||||||||||||| ||||||| 
seq2  GCACATGTACACATGTATGTGGA-GCCTGAGACTGATGTCA-GGATATTT  1097

seq1  AATTGTTCTTTCAT-CTTATTCTTTGAGGG-CAGGATCTCTTGA-TCAAA  1145
      ||||| |||| ||| ||||||||||||||| |||||  |||||| |||| 
seq2  AATTG-TCTTCCATCCTTATTCTTTGAGGGCCAGGA--TCTTGATTCAAC  1144

seq1  CTCAGAGCTCA  1156
       ||||||||||
seq2  TTCAGAGCTCA  1155

seq1: chr14_73843813_73843974
seq2: B6Ng01-247J15.g_72_233 (reverse)

seq1  ATAACAACGCGCCCCCCCCCCAACACACATACACAACTCTTTCTTGTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAACGCGCCCCCCCCCCAACACACATACACAACTCTTTCTTGTTTT  50

seq1  TCTTCTTTTTCCTTCTTAGCTACACACTGCTGGTTCAGCTTGCAGTAGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTTTTCCTTCTTAGCTACACACTGCTGGTTCAGCTTGCAGTAGCC  100

seq1  AAACCGTTGCCTACAGTGGAAGTCAACTGTATCAAGGGCCTGGAAGTAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCGTTGCCTACAGTGGAAGTCAACTGTATCAAGGGCCTGGAAGTAGC  150

seq1  CAGAGACATGAG  162
      ||||||||||||
seq2  CAGAGACATGAG  162