BAC Information

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BAC

Clone NameB6Ng01-247K21
Chromosome14 (Build37)
Map Location 70,851,386 - 71,025,394
singlet/doubletdoublet
Overlap genePhyhip, Bmp1, Sftpc, Lgi3, Reep4, Hr, Nudt18, Rai16, Epb4.9
Upstream geneSlc25a37, D930020E02Rik, Entpd4, Loxl2, R3hcc1, Chmp7, Tnfrsf10b, Rhobtb2, LOC100043701, 1700081D17Rik, LOC668397, Egr3, Bin3, 2610301G19Rik, 9930012K11Rik, Pdlim2, Sorbs3, Ppp3cc, LOC100043115, Slc39a14, EG668450, Piwil2, Polr3d
Downstream geneFgf17, Npm2, Xpo7, LOC668443, Dok2, Gfra2, LOC100043132, LOC100043136
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-247K21.bB6Ng01-247K21.g
ACCGA055951GA055952
length1,197865
definitionB6Ng01-247K21.b B6Ng01-247K21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,851,386 - 70,852,116)(71,024,534 - 71,025,394)
sequence
gaattctctatgaagaccaggctggccttgaactcagagctctatctgcc
tctgcttcccaagtgctgggattaaaggtatgcaccaccaggcctgatct
tgaccatttggaattaaataagagattggtgtgttcctctgggacagaca
atgtctccttctcttgatgttccttggttggctgtagttctgagtctgtt
gtgagacacaatggacttgctcccttctgtgttaacaagcctagtggtgt
cgttcttgtccaggtaagcttaggcagcagtgttggtgagacttcatgga
ctttcctaggaggtacaacctcacagtaaactccctggtcctctggctct
tacagtctttcttctgcaatgacccccagtgttaggtgcaggagctgtgc
tgtggatgtatcaactgatgttagactccacgactgtattttaatcggct
gtgggtttctgaatggtccccatctattgtaaagagaagttacattgatg
aggggttagaactatacttaatccataggcattaggataaataaatagaa
tgtagttaggggttatgctggtttagtagtttggtggttgtagactcttc
tccaagatctatgacttcactagcttcaaatagttggcagatttccagta
ccaggcatgggttctctcttgttgagtgagccttagatccaactagagag
ctgttagttaccacccaagtgtgagcatcaactaccccacccttagcatt
cctcttgtgccatgctgatcttgtacttgacagatgtcatagcagagcaa
tagtgctggctgctcccctctcattgccttcgggtaccatggaggctagt
cctcagggaggaagctttcagtcagatccagctcgggtcctctgggtccc
atgtcctaagtgcatggtgtcattaatggtaggctttttctctactttgg
tgatgcagatgtagggcagattagaccacattaaagtgaaaccaccacac
agcgcaggactttttttttttttaactgcccaggttagcatcaaactggt
gatccttctaagcttccatcctccttaaattaagctggtgccacactaag
ctcaggctctttgaatgttactcttcctagaatcatggaaaagcacaggc
ccccgtgatgcgtcagaaatccaatgcagctctcagagggtaaatgg
gaattctttcagagctcacgtgtggggagagtggaatggggacctctcct
gaattctagaatctggatttagggtgggagtttcctctcctccccagatc
tgccgatccagctatatatacctcaggactcagatctataaggaacgtgt
ttggacaaagcaagcctgagcagtggagggacctagctagaaaagagaaa
cttacctcttctgaggaaagagcacagaaatggccactaactcggtcaag
aggggaacctaagaaaactctaatgagctcaggcatgtttgcaggggagg
gaggcaggagggggggtcaaagggaaaggagcactcttgtcactgagagt
gggtaggcaggtcctggaacagacggactccgttatctactcctgaagct
gcctgatcttgttcaatgggacaggtgtcattcagagttggtatgaggaa
tgcatagtccaaagcaataggaaaaggatcagaaagcatttgcatgagcg
agagagagagagagagagagaaagagagagagagagagaaaacaagagaa
gagaaagtaacagggccttggtggcctgagaaaaggccagggataaactt
gacttaagtaaggcttttgatgagccactggcctaagcaggcccaaaccc
tgctgtcccgtgtctcaccccaccctacaatacacacattcactgtagtg
cgcgcccagttcccgccctattgactacaccacccttctcccaccctagg
atgctgttttgggaacgggtgacctagctgggagcctgtctttatttctg
gcattgcgtttgttgttgccacagcaactgtgcaagtgggggctgggagg
gggaggagggagagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_70851386_70852116
seq2: B6Ng01-247K21.b_496_1240

seq1  GGGTTTCTGAATGGTCCCCATCTATTGTAAAGAGAAGTTACATTGATGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTCTGAATGGTCCCCATCTATTGTAAAGAGAAGTTACATTGATGAG  50

seq1  GGGTTAGAACTATACTTAATCCATAGGCATTAGGATAAATAAATAGAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTAGAACTATACTTAATCCATAGGCATTAGGATAAATAAATAGAATG  100

seq1  TAGTTAGGGGTTATGCTGGTTTAGTAGTTTGGTGGTTGTAGACTCTTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAGGGGTTATGCTGGTTTAGTAGTTTGGTGGTTGTAGACTCTTCTC  150

seq1  CAAGATCTATGACTTCACTAGCTTCAAATAGTTGGCAGATTTCCAGTACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATCTATGACTTCACTAGCTTCAAATAGTTGGCAGATTTCCAGTACC  200

seq1  AGGCATGGGTTCTCTCTTGTTGAGTGAGCCTTAGATCCAACTAGAGAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATGGGTTCTCTCTTGTTGAGTGAGCCTTAGATCCAACTAGAGAGCT  250

seq1  GTTAGTTACCACCCAAGTGTGAGCATCAACTACCCCACCCTTAGCATTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTTACCACCCAAGTGTGAGCATCAACTACCCCACCCTTAGCATTCC  300

seq1  TCTTGTGCCATGCTGATCTTGTACTTGACAGATGTCATAGCAGAGCAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTGCCATGCTGATCTTGTACTTGACAGATGTCATAGCAGAGCAATA  350

seq1  GTGCTGGCTGCTCCCCTCTCATTGCCTTCGGGTACCATGGAGGCTAGTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGGCTGCTCCCCTCTCATTGCCTTCGGGTACCATGGAGGCTAGTCC  400

seq1  TCAGGGAGGAAGCTTTCAGGTCAGATCCAGCTCGGGTCCTCTGGGTCCCA  450
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TCAGGGAGGAAGCTTTCA-GTCAGATCCAGCTCGGGTCCTCTGGGTCCCA  449

seq1  TGTCCTAAGTGCATGGTGTCATTAATGGTAGGCTTTTTCTCTACTTTGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTAAGTGCATGGTGTCATTAATGGTAGGCTTTTTCTCTACTTTGGT  499

seq1  GATGCAGATGTAGGGCAGATTAGACCACATTAAAAGTGAAACCACCACAC  550
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GATGCAGATGTAGGGCAGATTAGACCACATT-AAAGTGAAACCACCACAC  548

seq1  AGCGGCAGGAC--TTTTTTTTTTTAACTGCCCAGGTTAGCATCAAACTGG  598
      ||| |||||||  |||||||||||||||||||||||||||||||||||||
seq2  AGC-GCAGGACTTTTTTTTTTTTTAACTGCCCAGGTTAGCATCAAACTGG  597

seq1  TGAT-CTTCT-AGCTT-CATCCTC--TAAATT-AGCT-GTGCCACACTAG  641
      |||| ||||| ||||| |||||||  |||||| |||| ||||||||||| 
seq2  TGATCCTTCTAAGCTTCCATCCTCCTTAAATTAAGCTGGTGCCACACTAA  647

seq1  GCTCA-GCTCCTTGA--TTTTCTCT--CTAG-ATCAT-GAAAAGCACAG-  683
      ||||| |||| ||||   || ||||  |||| ||||| ||||||||||| 
seq2  GCTCAGGCTCTTTGAATGTTACTCTTCCTAGAATCATGGAAAAGCACAGG  697

seq1  -CCACTGAAAGCTGCAGGATATCCAAATGCAGC-CTCAGAGGGTAAATGG  731
       || |   | ||  || || |||| |||||||| ||||||||||||||||
seq2  CCCCCGTGATGCGTCA-GAAATCC-AATGCAGCTCTCAGAGGGTAAATGG  745

seq1: chr14_71024534_71025394
seq2: B6Ng01-247K21.g_70_934 (reverse)

seq1  CCTCTCCCT-CTCCCCCTCCCAG-CCCCACTTGCACAGTTGCTGTGGCAA  48
      ||||||||| ||||||||||||| ||||||||||||||||||||||||||
seq2  CCTCTCCCTCCTCCCCCTCCCAGCCCCCACTTGCACAGTTGCTGTGGCAA  50

seq1  CAAC-AACGCAATGCCAGAAATAAAGACAGGCT-CCAGCTAGGTCACCCG  96
      |||| |||||||||||||||||||||||||||| ||||||||||||||||
seq2  CAACAAACGCAATGCCAGAAATAAAGACAGGCTCCCAGCTAGGTCACCCG  100

seq1  TTCCCAAAACAGCATCCTAGGGTGGGAGAAGGGTGGTGTAGTCAATAGGG  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAAAACAGCATCCTAGGGTGGGAGAAGGGTGGTGTAGTCAATAGGG  150

seq1  CGGGAACTGGGCGCGCACTACAGTGAATGTGTGTATTGTAGGGTGGGGTG  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGAACTGGGCGCGCACTACAGTGAATGTGTGTATTGTAGGGTGGGGTG  200

seq1  AGACACGGGACAGCAGGGTTTGGGCCTGCTTAGGCCAGTGGCTCATCAAA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACGGGACAGCAGGGTTTGGGCCTGCTTAGGCCAGTGGCTCATCAAA  250

seq1  AGCCTTACTTAAGTCAAGTTTATCCCTGGCCTTTTCTCAGGCCACCAAGG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTACTTAAGTCAAGTTTATCCCTGGCCTTTTCTCAGGCCACCAAGG  300

seq1  CCCTGTTACTTTCTCTTCTCTTGTTTTCTCTCTCTCTCTCTCTTTCTCTC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTTACTTTCTCTTCTCTTGTTTTCTCTCTCTCTCTCTCTTTCTCTC  350

seq1  TCTCTCTCTCTCTCTCGCTCATGCAAATGCTTTCTGATCCTTTTCCTATT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCGCTCATGCAAATGCTTTCTGATCCTTTTCCTATT  400

seq1  GCTTTGGACTATGCATTCCTCATACCAACTCTGAATGACACCTGTCCCAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGGACTATGCATTCCTCATACCAACTCTGAATGACACCTGTCCCAT  450

seq1  TGAACAAGATCAGGCAGCTTCAGGAGTAGATAACGGAGTCCGTCTGTTCC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACAAGATCAGGCAGCTTCAGGAGTAGATAACGGAGTCCGTCTGTTCC  500

seq1  AGGACCTGCCTACCCACTCTCAGTGACAAGAGTGCTCCTTTCCCTTTGAC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCTGCCTACCCACTCTCAGTGACAAGAGTGCTCCTTTCCCTTTGAC  550

seq1  CCCCCCTCCTGCCTCCCTCCCCTGCAAACATGCCTGAGCTCATTAGAGTT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCTCCTGCCTCCCTCCCCTGCAAACATGCCTGAGCTCATTAGAGTT  600

seq1  TTCTTAGGTTCCCCTCTTGACCGAGTTAGTGGCCATTTCTGTGCTCTTTC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAGGTTCCCCTCTTGACCGAGTTAGTGGCCATTTCTGTGCTCTTTC  650

seq1  CTCAGAAGAGGTAAGTTTCTCTTTTCTAGCTAGGTCCCTCCACTGCTCAG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAAGAGGTAAGTTTCTCTTTTCTAGCTAGGTCCCTCCACTGCTCAG  700

seq1  GCTTGCTTTGTCCAAACACGTTCCTTATAGATCTGAGTCCTGAGGTATAT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCTTTGTCCAAACACGTTCCTTATAGATCTGAGTCCTGAGGTATAT  750

seq1  ATAGCTGGATCGGCAGATCTGGGGAGGAGAGGAAACTCCCACCCTAAATC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTGGATCGGCAGATCTGGGGAGGAGAGGAAACTCCCACCCTAAATC  800

seq1  CAGATTCTAGAATTCAGGAGAGGTCCCCATTCCACTCTCCCCACACGTGA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTCTAGAATTCAGGAGAGGTCCCCATTCCACTCTCCCCACACGTGA  850

seq1  GCTCTGAAAGAATTC  861
      |||||||||||||||
seq2  GCTCTGAAAGAATTC  865