BAC Information

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BAC

Clone NameB6Ng01-249A11
Chromosome14 (Build37)
Map Location 66,739,551 - 66,861,928
singlet/doubletdoublet
Overlap geneEphx2, Chrna2, Ptk2b
Upstream geneFzd3, LOC668286, Fbxo16, Zfp395, Pnoc, Elp3, Gm600, Scara5, Pbk, Esco2, Ccdc25, Scara3, Clu, Gulo, Adam2, LOC100043675
Downstream geneLOC100043676, Trim35, Stmn4, Adra1a, ENSMUSG00000057913, LOC668366, Dpysl2, EG432870, Pnma2, LOC672614, Bnip3l, Ppp2r2a, Ebf2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-249A11.bB6Ng01-249A11.g
ACCGA056955GA056956
length1,1261,142
definitionB6Ng01-249A11.b B6Ng01-249A11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(66,860,793 - 66,861,928)(66,739,551 - 66,740,698)
sequence
gaattctcatggttcatttcaccaccctcaggcctaagggctacaattgt
tctctgtagagctgcagaggaggaagtgaggaaacagtcaggtccctgca
gggctgattagagagcctggccacttgccaccaacatgcgtgtacatgct
gagtatccattgattgggtgtccacattctgccaaaagagcccggagcct
ggctcttcacaaatccccaccctatgtacacccagcttgactttgcagtc
ttactacaaccctacaacatctgcaccgtcatgttcgtgtcactggggag
gaagctgagaaggaggacagttggcagggcacttgtgacatggctaagga
ggggtagagccagagcttgtccaaggtcttcctgtccttgctatgagatg
ccaccaaaagctgattcaagagctcttcacctggaaaggacatcgctgga
atagatagggccactcagtgccatgttcctggatgagtgatgagctgctt
attgtattctaggtcctatgataaatacaaattcagaaaaggggtgttcc
tttttttttttttttttttttttttttttttttttttttttggcttaact
tggcaaaaactagtaagctggagctggggaaacagtgcaccatgcaagca
tgagaacctggactttatccccaaaaatgatggggaaaaactggggttgg
cccatgacacttgccatacccgcactggggaagggggagacggatattcc
ccctattgtttactgcccaacccagtccggcctgcttagagaacttcaaa
acaaaaaaaaaatctttccccccaacgaaagaaaaatatgaaagtggagg
gtccttaagaacacaccctaagggtgaactcttgcctccccacacatttc
aaaatgtgtaaaaaaacatcccacccctcaggggctgtaaaactttagtc
aaaaaaggaacattataacttgttttaaacgggggtgaagagactcctct
ttctgggggacctaagaaatttccttggcaaaaaatacacacataaaaac
ccccgtttcaaggtgcctttcccaaagaagggtcctctcggggctattat
gtagcaatctcttgccgggaggggcc
gaattcaggttgttggcttgaagaacaagcacctctgtcaacttagccat
ctcaccagcccctgagcactgtagtttaagaatgcttcatcaagtcagcg
agtaatgaaaggaacttgacagaaagggaaactggtgaattaagagatac
aggggggctggaaagcactgtgtgctgttccagagggcccaggttacact
cccagcacctacatgatggctcagaaccatctgggactctggttccagag
gatacaacaccctcttctgcctctatggacactaggcatgcgcatggtac
agagatacacatacagacagaacacccacacacatacaataagagcaaaa
cacaaataatgagagacacaaggaaatttccagggaccttgaactttggt
cacttgtttgggcagggttatgtctgcaggcaggatggaaatgcccagtg
cgtggaagaggcattttcttcactctctgaaacctacacagttaggttat
acctctgatgggtaaacaagctcagagcccggtactctgacctcccaagc
tcagttcattttgctgtggcctactctatattacacacctgtgaacaacc
ctggtcacagaggagctgtgtgaagtatcatctagtggtatgctaaatgc
atcactctctagtcatggagaatttggtaaataatagcatgtgtcaagaa
caccgctgcccatttgctttcatatcagctaatttaactgctaccccaaa
ttcctagtgaaaggcaacgccttattaacgtggagagatgactaaaaaag
gcaggttaagcaagcacacccgtgcacttacacacattaaaacattcatc
catgcatatccacataaaattgggcatgtgaaggggctacctcttgtatc
cagacaggaaccccagtggagcgacatagacacaacccacccacaaaaac
tttcaacttcaaaattatcctgtctacaagaaatgcagcacagagactga
gggaatggccaaacattaaccagcccaacttgagacctatctcatgggca
gcaccaatccctaaacttttatgatactctgttagcttgcagacagaagc
atgttttttctctgagagctccaccagcagctgaactcagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_66860793_66861928
seq2: B6Ng01-249A11.b_45_1170 (reverse)

seq1  GGCCCCTCCAG--CACAGAATGCTACATCACTAGCCCAGATACGAGCCTC  48
      ||||||||| |   | ||| |||||||| | |||||| || | || ||| 
seq2  GGCCCCTCCCGGCAAGAGATTGCTACAT-AATAGCCCCGAGAGGACCCTT  49

seq1  CTCTGTGCAAAGGCACCTCAGATGCCGGGTGTTTTGTTTGCTTGTTTGTT  98
      || || | ||||||||||   |   |||| ||||| | ||  ||| | ||
seq2  CTTTG-GGAAAGGCACCTTGAA--ACGGGGGTTTT-TATGTGTGTAT-TT  94

seq1  TTTGCCAAGGAACTCTCTTTATGT-CCCCAGTAAGATGAGCTCTCTCTAC  147
      |||||||||||| | || ||| || |||||| |||| ||| |||||  ||
seq2  TTTGCCAAGGAAATTTC-TTAGGTCCCCCAGAAAGAGGAG-TCTCTTCAC  142

seq1  TCCTGTTTTTACTACAAGTTTGTTATGTTCCTTTTTCTGACTACTAGTTC  197
       || |  ||||  ||||| || | |||||||||||| ||||||  |||| 
seq2  CCCCG--TTTAAAACAAG-TTATAATGTTCCTTTTT-TGACTA-AAGTT-  186

seq1  TTACGTGCACCTGAGTGTGTGAG-TGTGTTTGTACACGTGTTGAACGTGT  246
      ||||  || |||||| | ||| | ||| ||| ||||| | |||||  |||
seq2  TTAC-AGCCCCTGAG-GGGTGGGATGTTTTTTTACACATTTTGAA-ATGT  233

seq1  GTGTGGAGGCCAGAGGTCAACCTTA-GGTGTCGCTCCTCAGGAGCCATCC  295
      ||| |||||| |||| ||| ||||| ||||| | || | |||| || |||
seq2  GTGGGGAGGCAAGAGTTCACCCTTAGGGTGT-GTTCTTAAGGA-CCCTCC  281

seq1  ACATTCATA-TTATCGTTCGTTCTGGGGATAGAGTCTTTTTTTGGTCTGG  344
      || |||||| || || ||||||  ||||| ||| | |||||||| | || 
seq2  ACTTTCATATTTTTCTTTCGTTGGGGGGAAAGATTTTTTTTTTGTTTTGA  331

seq1  AGCTCTCCTAGCAGGCCAGACT-GGCTGGGCAGTAAACCATA-GGGGTAT  392
      || ||||  |||||||| |||| || |||||||||||| ||| |||| ||
seq2  AGTTCTCTAAGCAGGCCGGACTGGGTTGGGCAGTAAACAATAGGGGGAAT  381

seq1  ATCCGTCTCCACCTT-CCCAGTGCTGGTATTGCAAGTGTACAT-GGCCAA  440
      |||||||||| |||| |||||||| ||||| |||||||| ||| ||||||
seq2  ATCCGTCTCCCCCTTCCCCAGTGCGGGTATGGCAAGTGT-CATGGGCCAA  430

seq1  GCCCAGCTTTTTCCCATCAGTTCTGGGGATCAAGTCCAGGTTCTCATGCT  490
       ||||| |||| ||||||| || ||||||| |||||||||||||||||||
seq2  CCCCAGTTTTTCCCCATCATTTTTGGGGATAAAGTCCAGGTTCTCATGCT  480

seq1  TGCATGCTGCACTGTTTCCCCAGCTTCAGCCTACTAGCTTTTTGCAAGCT  540
      |||||| |||||||||||||||||| |||| |||||| ||||  |||| |
seq2  TGCATGGTGCACTGTTTCCCCAGCTCCAGCTTACTAGTTTTTGCCAAGTT  530

seq1  AAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAA  590
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAA  580

seq1  CACCCCTTTTCTGAATTTGTATTTATCATAGGACCTAGAATACAATAAGC  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCTTTTCTGAATTTGTATTTATCATAGGACCTAGAATACAATAAGC  630

seq1  AGCTCATCACTCATCCAGGAACATGGCACTGAGTGGCCCTATCTATTCCA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCATCACTCATCCAGGAACATGGCACTGAGTGGCCCTATCTATTCCA  680

seq1  GCGATGTCCTTTCCAGGTGAAGAGCTCTTGAATCAGCTTTTGGTGGCATC  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGATGTCCTTTCCAGGTGAAGAGCTCTTGAATCAGCTTTTGGTGGCATC  730

seq1  TCATAGCAAGGACAGGAAGACCTTGGACAAGCTCTGGCTCTACCCCTCCT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGCAAGGACAGGAAGACCTTGGACAAGCTCTGGCTCTACCCCTCCT  780

seq1  TAGCCATGTCACAAGTGCCCTGCCAACTGTCCTCCTTCTCAGCTTCCTCC  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCATGTCACAAGTGCCCTGCCAACTGTCCTCCTTCTCAGCTTCCTCC  830

seq1  CCAGTGACACGAACATGACGGTGCAGATGTTGTAGGGTTGTAGTAAGACT  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGACACGAACATGACGGTGCAGATGTTGTAGGGTTGTAGTAAGACT  880

seq1  GCAAAGTCAAGCTGGGTGTACATAGGGTGGGGATTTGTGAAGAGCCAGGC  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGTCAAGCTGGGTGTACATAGGGTGGGGATTTGTGAAGAGCCAGGC  930

seq1  TCCGGGCTCTTTTGGCAGAATGTGGACACCCAATCAATGGATACTCAGCA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGGGCTCTTTTGGCAGAATGTGGACACCCAATCAATGGATACTCAGCA  980

seq1  TGTACACGCATGTTGGTGGCAAGTGGCCAGGCTCTCTAATCAGCCCTGCA  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACACGCATGTTGGTGGCAAGTGGCCAGGCTCTCTAATCAGCCCTGCA  1030

seq1  GGGACCTGACTGTTTCCTCACTTCCTCCTCTGCAGCTCTACAGAGAACAA  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACCTGACTGTTTCCTCACTTCCTCCTCTGCAGCTCTACAGAGAACAA  1080

seq1  TTGTAGCCCTTAGGCCTGAGGGTGGTGAAATGAACCATGAGAATTC  1136
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGCCCTTAGGCCTGAGGGTGGTGAAATGAACCATGAGAATTC  1126

seq1: chr14_66739551_66740698
seq2: B6Ng01-249A11.g_67_1208

seq1  GAATTCAGGTTGTTGGCTTGAAGAACAAGCACCTCTGTCAACTTAGCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTTGTTGGCTTGAAGAACAAGCACCTCTGTCAACTTAGCCAT  50

seq1  CTCACCAGCCCCTGAGCACTGTAGTTTAAGAATGCTTCATCAAGTCAGCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCAGCCCCTGAGCACTGTAGTTTAAGAATGCTTCATCAAGTCAGCG  100

seq1  AGTAATGAAAGGAACTTGACAGAAAGGGAAACTGGTGAATTAAGAGATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATGAAAGGAACTTGACAGAAAGGGAAACTGGTGAATTAAGAGATAC  150

seq1  AGGGGGGCTGGAAAGCACTGTGTGCTGTTCCAGAGGGCCCAGGTTACACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGGCTGGAAAGCACTGTGTGCTGTTCCAGAGGGCCCAGGTTACACT  200

seq1  CCCAGCACCTACATGATGGCTCAGAACCATCTGGGACTCTGGTTCCAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCACCTACATGATGGCTCAGAACCATCTGGGACTCTGGTTCCAGAG  250

seq1  GATACAACACCCTCTTCTGCCTCTATGGACACTAGGCATGCGCATGGTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACAACACCCTCTTCTGCCTCTATGGACACTAGGCATGCGCATGGTAC  300

seq1  AGAGATACACATACAGACAGAACACCCACACACATACAATAAGAGCAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATACACATACAGACAGAACACCCACACACATACAATAAGAGCAAAA  350

seq1  CACAAATAATGAGAGACACAAGGAAATTTCCAGGGACCTTGAACTTTGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAATAATGAGAGACACAAGGAAATTTCCAGGGACCTTGAACTTTGGT  400

seq1  CACTTGTTTGGGCAGGGTTATGTCTGCAGGCAGGATGGAAATGCCCAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGTTTGGGCAGGGTTATGTCTGCAGGCAGGATGGAAATGCCCAGTG  450

seq1  CGTGGAAGAGGCATTTTCTTCACTCTCTGAAACCTACACAGTTAGGTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGAAGAGGCATTTTCTTCACTCTCTGAAACCTACACAGTTAGGTTAT  500

seq1  ACCTCTGATGGGTAAACAAGCTCAGAGCCCGGTACTCTGACCTCCCAAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTGATGGGTAAACAAGCTCAGAGCCCGGTACTCTGACCTCCCAAGC  550

seq1  TCAGTTCATTTTGCTGTGGCCTACTCTATATTACACACCTGTGAACAACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTCATTTTGCTGTGGCCTACTCTATATTACACACCTGTGAACAACC  600

seq1  CTGGTCACAGAGGAGCTGTGTGAAGTATCATCTAGTGGTATGCTAAATGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCACAGAGGAGCTGTGTGAAGTATCATCTAGTGGTATGCTAAATGC  650

seq1  ATCACTCTCTAGTCATGGAGAATTTGGTAAATAATAGCATGTGTCAAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTCTCTAGTCATGGAGAATTTGGTAAATAATAGCATGTGTCAAGAA  700

seq1  CACCGCTGCCCATTTGCTTTCATATCAGCTAATTTAACTGCTACCCCAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCGCTGCCCATTTGCTTTCATATCAGCTAATTTAACTGCTACCCCAAA  750

seq1  TTCCTAGTGAAAGGCAACGCCTTATTAACGTGGAGAGATGACTAAAAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAGTGAAAGGCAACGCCTTATTAACGTGGAGAGATGACTAAAAAAG  800

seq1  GCAGGTTAAGCAAGCACACCCGTGCACTTACACACATTAAAACATTCATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTTAAGCAAGCACACCCGTGCACTTACACACATTAAAACATTCATC  850

seq1  CATGCATATCCACATAAAATTGGGCATGTGAAGGGGCTACCTCTTGTATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCATATCCACATAAAATTGGGCATGTGAAGGGGCTACCTCTTGTATC  900

seq1  CAGACAGGAACCCCAGTGGAGCGACATAGACACCAACCCACCCAC-AAAA  949
      |||||||||||||||||||||||||||||||| |||||||||||| ||||
seq2  CAGACAGGAACCCCAGTGGAGCGACATAGACA-CAACCCACCCACAAAAA  949

seq1  CTTTCAACTCCAAAATTATCCTGTCTACAAGAAATGCAGGCACAGAGACT  999
      ||||||||| |||||||||||||||||||||||||||| |||||||||||
seq2  CTTTCAACTTCAAAATTATCCTGTCTACAAGAAATGCA-GCACAGAGACT  998

seq1  GAGGGAATGGCCAACCAATAACCAGCCCAACTTGAGACCTATCTCATGGG  1049
      |||||||||||||| || ||||||||||||||||||||||||||||||||
seq2  GAGGGAATGGCCAAACATTAACCAGCCCAACTTGAGACCTATCTCATGGG  1048

seq1  CAAGCACCAATCCCTAACACTGTTAATGATACTCTGTTAGGCTTGCAGAC  1099
      | ||||||||||||||| ||| || |||||||||||||| ||||||||||
seq2  C-AGCACCAATCCCTAA-ACT-TTTATGATACTCTGTTA-GCTTGCAGAC  1094

seq1  AGGAGCATGTTTTTCCTCTGAGAGGCTCCACCCAGCAGCTG-ACTCAGCT  1148
      || ||||||||||| |||||||| |||||| |||||||||| ||||||||
seq2  AGAAGCATGTTTTTTCTCTGAGA-GCTCCA-CCAGCAGCTGAACTCAGCT  1142