MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-252M12
Chromosome	14 (Build37)
Map Location	62,504,922 - 62,505,036
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Mipep, LOC100043586, Tnfrsf19, Sacs, Sgcg, Arl11, EG432864, Ebpl, Kpna3, LOC100042933, EG432865, 6330409N04Rik, LOC100042941, Trim13, Kcnrg, LOC668253
Downstream gene	Dleu7, Rnaseh2b, Gucy1b2, LOC100042960, Ppia-ps14_723.1, LOC545062, EG629059, E130113E03Rik, Ints6, LOC100042969, LOC668263, Wdfy2
Link	Open Mouse BAC browser

Click to get alignment info.

name	Mipep (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70478 MGI:1917728
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043586 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043586
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs

name	Tnfrsf19 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:29820 MGI:1352474
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sacs (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50720 MGI:1354724
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sgcg (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:24053 MGI:1346524
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Arl11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:219144 MGI:2444054
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG432864 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:432864 MGI:3646225
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 727 ESTs, 28 Proteins pseudo : _no_value

name	Ebpl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68177 MGI:1915427
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kpna3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16648 MGI:1100863
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042933 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042933
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	EG432865 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:432865 MGI:3646224
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 416 ESTs, 7 Proteins

name	6330409N04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66674 MGI:1913924
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042941 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042941
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 4 Proteins pseudo : _no_value

name	Trim13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66597 MGI:1913847
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kcnrg (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:328424 MGI:2685591
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC668253 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668253
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Dleu7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:239133 MGI:2447771
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rnaseh2b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67153 MGI:1914403
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gucy1b2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:239134 MGI:2660873
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042960 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042960
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Ppia-ps14_723.1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:606717
definition	note : peptidylprolyl isomerase A pseudogene 14_723.1 pseudo : _no_value

name	LOC545062 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545062
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 30 ESTs, 7 Proteins pseudo : _no_value

name	EG629059 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:629059 MGI:3645930
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 ESTs, 3 Proteins

name	E130113E03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319433 MGI:2442020
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 40 ESTs, 1 Protein

name	Ints6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18130 MGI:1202397
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042969 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042969
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC668263 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668263
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 3 Proteins pseudo : _no_value

name	Wdfy2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:268752 MGI:2442811
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mipep (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142377084 GeneID:70478 MGI:1917728
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitochondrial intermediate peptidase transcript_id : NM_027436.2

name	LOC100043586 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265772 GeneID:100043586
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs product : hypothetical protein LOC100043586 transcript_id : XM_001480382.1

name	Tnfrsf19 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142343986 GeneID:29820 MGI:1352474
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tumor necrosis factor receptor superfamily, member 19 transcript_id : NM_013869.4

name	Sacs (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370978 GeneID:50720 MGI:1354724
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sacsin transcript_id : NM_172809.3

name	Sgcg (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125490359 GeneID:24053 MGI:1346524
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sarcoglycan, gamma (dystrophin-associated glycoprotein) transcript_id : NM_011892.3

name	Arl11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42476057 GeneID:219144 MGI:2444054
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ADP-ribosylation factor-like 11 transcript_id : NM_177337.3

name	Ebpl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142374298 GeneID:68177 MGI:1915427
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : emopamil binding protein-like transcript_id : NM_026598.2

name	Kpna3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:88014722 GeneID:16648 MGI:1100863
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : karyopherin (importin) alpha 3 transcript_id : NM_008466.3

name	EG432865 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94397199 GeneID:432865 MGI:3646224
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 416 ESTs, 7 Proteins product : predicted gene, EG432865 transcript_id : XM_484385.4

name	6330409N04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142387098 GeneID:66674 MGI:1913924
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 6330409N04 gene transcript_id : NM_025697.2

name	Trim13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348908 GeneID:66597 MGI:1913847
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tripartite motif protein 13 transcript_id : NM_023233.2

name	Kcnrg (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46195443 GeneID:328424 MGI:2685591
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium channel regulator transcript_id : NM_206974.1

name	Kcnrg (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802287 GeneID:328424 MGI:2685591
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium channel regulator transcript_id : NM_001039105.2

name	LOC668253 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94397200 GeneID:668253
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : similar to sterile alpha motif domain containing 1 transcript_id : XM_001000367.1

name	Dleu7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27735011 GeneID:239133 MGI:2447771
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : deleted in lymphocytic leukemia, 7 transcript_id : NM_173419.1

name	Rnaseh2b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142343619 GeneID:67153 MGI:1914403
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribonuclease H2, subunit B transcript_id : NM_026001.2

name	Gucy1b2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142369173 GeneID:239134 MGI:2660873
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : guanylate cyclase 1, soluble, beta 2 transcript_id : NM_172810.2

name	LOC100042960 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265632 GeneID:100042960
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : similar to hCG28707 transcript_id : XM_001479179.1

name	EG629059 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149265634 GeneID:629059 MGI:3645930
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 ESTs, 3 Proteins product : predicted gene, EG629059 transcript_id : XM_127791.7

name	E130113E03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94397204 GeneID:319433 MGI:2442020
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 40 ESTs, 1 Protein product : RIKEN cDNA E130113E03 gene transcript_id : XM_893895.2

name	Ints6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51467748 GeneID:18130 MGI:1202397
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : integrator complex subunit 6 transcript_id : NM_008715.2

name	LOC100042969 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265637 GeneID:100042969
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100042969 transcript_id : XM_001479206.1

name	Wdfy2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348899 GeneID:268752 MGI:2442811
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : WD repeat and FYVE domain containing 2 transcript_id : NM_175546.3

name	Mipep (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28076953 GeneID:70478 MGI:1917728
definition	GO_function : GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : mitochondrial intermediate peptidase protein_id : NP_081712.1

name	LOC100043586 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265773 GeneID:100043586
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480432.1

name	Tnfrsf19 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981428 GeneID:29820 MGI:1352474
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 exception : mismatches in translation note : tumor necrosis factor receptor superfamily, member 20 product : tumor necrosis factor receptor superfamily, member 19 protein_id : NP_038897.3

name	Sacs (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85677482 CCDS:CCDS27180.1 GeneID:50720 MGI:1354724
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0031072 - heat shock protein binding [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0050750 - low-density lipoprotein receptor binding [Evidence ISS]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006457 - protein folding [Evidence IEA] codon_start : 1 product : sacsin protein_id : NP_766397.2

name	Sgcg (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755488 CCDS:CCDS27181.1 GeneID:24053 MGI:1346524
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence TAS]; GO:0016020 - membrane [Evidence IEA]; GO:0016012 - sarcoglycan complex [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007010 - cytoskeleton organization and biogenesis [Evidence IEA]; GO:0016044 - membrane organization and biogenesis [Evidence TAS] codon_start : 1 note : sarcoglycan, gamma (35kD dystrophin-associated glycoprotein) product : sarcoglycan, gamma (dystrophin-associated glycoprotein) protein_id : NP_036022.1

name	Arl11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:42476058 CCDS:CCDS27182.1 GeneID:219144 MGI:2444054
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0007046 - ribosome biogenesis [Evidence IEA]; GO:0006364 - rRNA processing [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA] codon_start : 1 note : ADP-ribosylation factor-like tumor suppressor protein 1 product : ADP-ribosylation factor-like 11 protein_id : NP_796311.2

name	Ebpl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386086 CCDS:CCDS27183.1 GeneID:68177 MGI:1915427
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0047750 - cholestenol delta-isomerase activity [Evidence IEA] GO_process : GO:0016125 - sterol metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation product : emopamil binding related protein, delta8-delta7 sterol isomerase related protein protein_id : NP_080874.1

name	Kpna3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680596 GeneID:16648 MGI:1100863
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0008565 - protein transporter activity [Evidence IEA] GO_process : GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0006606 - protein import into nucleus [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : karyopherin (importin) alpha 3 protein_id : NP_032492.1

name	EG432865 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51768484 GeneID:432865 MGI:3646224
definition	codon_start : 1 product : similar to 40S ribosomal protein S12 protein_id : XP_484385.1

name	6330409N04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27228993 CCDS:CCDS27185.1 GeneID:66674 MGI:1913924
definition	codon_start : 1 product : hypothetical protein LOC66674 protein_id : NP_079973.1

name	Trim13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:14149754 CCDS:CCDS27186.1 GeneID:66597 MGI:1913847
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0045786 - negative regulation of progression through cell cycle [Evidence IEA] codon_start : 1 note : ret finger protein 2 product : tripartite motif protein 13 protein_id : NP_075722.1

name	Kcnrg (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84993724 CCDS:CCDS27187.1 GeneID:328424 MGI:2685591
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0008076 - voltage-gated potassium channel complex [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA]; GO:0005249 - voltage-gated potassium channel activity [Evidence IEA] GO_process : GO:0006813 - potassium ion transport [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; CLLD4-like product : potassium channel regulator isoform 1 protein_id : NP_001034194.1

name	Kcnrg (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46195444 GeneID:328424 MGI:2685591
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0008076 - voltage-gated potassium channel complex [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA]; GO:0005249 - voltage-gated potassium channel activity [Evidence IEA] GO_process : GO:0006813 - potassium ion transport [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; CLLD4-like product : potassium channel regulator isoform 2 protein_id : NP_996857.1

name	LOC668253 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94397201 GeneID:668253
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001000367.1

name	Dleu7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27735012 CCDS:CCDS27188.1 GeneID:239133 MGI:2447771
definition	codon_start : 1 product : deleted in lymphocytic leukemia, 7 protein_id : NP_775595.1

name	Rnaseh2b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037097 CCDS:CCDS27189.1 GeneID:67153 MGI:1914403
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] codon_start : 1 product : deleted in lymphocytic leukemia 8 protein_id : NP_080277.1

name	Gucy1b2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370208 CCDS:CCDS27190.1 GeneID:239134 MGI:2660873
definition	EC_number : 4.6.1.2 GO_function : GO:0004383 - guanylate cyclase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA] GO_process : GO:0006182 - cGMP biosynthesis [Evidence IEA]; GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 note : soluble guanylyl cyclase beta2 subunit product : guanylate cyclase 1, soluble, beta 2 protein_id : NP_766398.1

name	LOC100042960 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265633 GeneID:100042960
definition	codon_start : 1 product : similar to hCG28707 protein_id : XP_001479229.1

name	EG629059 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149265635 GeneID:629059 MGI:3645930
definition	codon_start : 1 product : hypothetical protein protein_id : XP_127791.7

name	E130113E03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82954336 GeneID:319433 MGI:2442020
definition	codon_start : 1 product : hypothetical protein LOC319433 protein_id : XP_898988.1

name	Ints6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51467749 CCDS:CCDS27191.1 GeneID:18130 MGI:1202397
definition	GO_component : GO:0032039 - integrator complex [Evidence ISS] GO_process : GO:0016180 - snRNA processing [Evidence ISS] codon_start : 1 note : Notch2-like; DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26 product : integrator complex subunit 6 protein_id : NP_032741.2

name	LOC100042969 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265638 GeneID:100042969
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479256.1

name	Wdfy2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30425326 CCDS:CCDS27192.1 GeneID:268752 MGI:2442811
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : WD repeat and FYVE domain containing 2 protein_id : NP_780755.1

name	LOC100042933 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042933
definition	number : 1 pseudo : _no_value

name	EG432864 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94397198 GeneID:432864 MGI:3646225
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 727 ESTs, 28 Proteins product : predicted gene, EG432864 pseudo : _no_value transcript_id : XR_002157.1

name	LOC100042941 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149265631 GeneID:100042941
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 4 Proteins product : similar to proteasome (prosome, macropain) subunit, alpha type 2 pseudo : _no_value transcript_id : XR_034065.1

name	LOC545062 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149265774 GeneID:545062
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 30 ESTs, 7 Proteins product : similar to Small nuclear ribonucleoprotein polypeptide N pseudo : _no_value transcript_id : XR_034695.1

name	LOC668263 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149265639 GeneID:668263
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 3 Proteins product : similar to ribosomal protein L7a pseudo : _no_value transcript_id : XR_034100.1

clone name	MSMg01-396A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418J08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-097H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-235D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480J16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-300A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-208J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543G16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-164A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299I19
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-252M12.b	B6Ng01-252M12.g
ACC	GA059687	GA059688
length	349	115
definition	B6Ng01-252M12.b	B6Ng01-252M12.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	ttagtccccagttggtggaactgtttggcaaggattcagaggtgtggcct tgttagagaggtgtgtcactgtgtttgggctttggggttttaaagcctcg ggcatttccagctagctcctactcacctctctctctctctctctctctct ctctctctctctctctctctctctctctctaacacacttttttagtctct gttttttgttgggagaggcatgagtctctcttgatagaatgtcagaattg agtggtacatatatatatagtttctctcttttatcctctctttctatctt tctgttatattaactaaaaataaattatttctacacaccaccagaccac	aaggctagcctgggttatttgagaccctgtctctaaaaaagggggggagg gggagttgatctctatctctcgcatgtgtatgtatgtatgtgtgtgagtg tgctgtggggggtgt
quality values	Open. Hide. 62 51 47 59 62 62 62 62 44 43 62 62 62 62 59 59 62 62 62 62 59 62 62 18 15 18 23 14 13 18 27 23 28 20 19 25 28 23 27 54 54 54 62 62 62 62 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 44 28 32 30 40 31 28 36 50 56 32 31 48 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 54 62 62 54 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 54 62 62 62 62 62 54 62 62 54 54 54 54 54 42 42 42 54 54 54 62 62 54 54 54 62 62 62 54 54 33 42 40 40 25 28 30 27 18 23 30 30 34 25 27 21 27 12 12 12 12 14 13 15 14 13 13 11 10 12 9 11 10 12 13 10 11 15 13 19 13 13 13 13 13 13 13 13 15 16 15 13 18 18 11 11 19 13 13 13 13 11 13 11 14 15 11 13 10 18 13 18 11 13 10 10 9 9 18 12 12 13 8 8 13 17 12 11 13 10 25 21 13 9 13 10 10 16 18 18 10 23 12 12 17 12 13 18 11 13 18 19 11 12 15 13 16 16 18 13 15 13 13 13 14 9 12 24 18 18 23 23 13 13 11 12 19 13 13 18 13 16 12 23 11 13 18 24 24 31 16 13 15 11 12 16 13 15 14 24 23 11 38 24 13 11 13 14 15 14 14 11 15 14 13 15 13 18 18 19 13 13 11 13 11 11 10 10 10 8	Open. Hide. 43 59 62 51 15 19 17 7 18 18 24 28 28 40 34 27 46 49 46 43 54 62 54 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 54 54 62 62 62 62 46 56 50 32 32 30 30 34 28 36 46 31 28 34 49 41 56 62 51 32 15 12 13 10 11 11 10 34 18 62 49 59 59 62 59 59 59 62 59 59 62 62 59 59 56 59 56 56 62 51 56 59 51 59 59 59 59 43 59 50 50 56 50 49 43 43 15

Alignment Information

BAC End 1

BAC End 2

seq1: chr14_62504922_62505036
seq2: B6Ng01-252M12.g_72_186

seq1  AAGGCTAGCCTGGGTTATTTGAGACCCTGTCTCTAAAAAAGGGGGGGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTAGCCTGGGTTATTTGAGACCCTGTCTCTAAAAAAGGGGGGGAGG  50

seq1  GGGAGTTGATCTCTATCTCTCTCATGTGTATGTATGTATGTGTGTGAGTG  100
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GGGAGTTGATCTCTATCTCTCGCATGTGTATGTATGTATGTGTGTGAGTG  100

seq1  TGCTGTGGGGGGTGT  115
      |||||||||||||||
seq2  TGCTGTGGGGGGTGT  115

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information