BAC Information

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BAC

Clone NameB6Ng01-253F17
Chromosome14 (Build37)
Map Location 100,248,707 - 100,249,854
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043787, 2410129H14Rik, 6720463M24Rik, Dis3, D14Ertd581e, LOC100043395, LOC100043397, Klf5, LOC100043400, LOC100043789, LOC668671, LOC668672, EG546623
Downstream geneKlf12, LOC100043413, EG668683, EG668684
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-253F17.g
ACCGA060115
length1,146
definitionB6Ng01-253F17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctttagaaaacagttctggagagttcggtgttactttcagaaac
tattacagctacaagtatcctgcaaacacttagctcccactttaaaaaat
ataggtcttgtttaagcgcgagggatgaaacagtgtgtgtgtgactgact
tgccacactccgaaaaaatctagcaatgtacgagagagtatgactgaaaa
aagttaaataactgaaaacagtgtgagaactgtacgtgtgtaagcacaca
tgtgtacttgtgtgtctctgtgtgtgtacgtgcgtgtgctctcatgtgca
caaaagagaaagtgtgtgtgaaagtgtgcgtgtctgtgtctcggtgtgtg
ttaacccaaactcagacaacatagaaagttcctgcaagggggaactcagt
gtaccacagttccaggggtaaaacaatcttagaaaaaaagattgacatct
tcatggtttaggggaaaaaatgaaagataattctgtatagatagggtata
gatctagtctaagtatttgaaaattagaagctggctgtctaacatgacct
aagcaaatatggcatgaacagatatgttgacatggagggggaaagctcac
atggcctcagccctacacaaatcactcagctcctgaggaatgctgggagt
ggaagaattagtgtgctccctaaacgtcttccctcgaaatctggaagagc
acaccaaatgttgtccaatattaaatggccatcccagaacacatacacaa
caagcaacatcaagaagatgctccacacattttatttatatgtacataaa
gaaagagaggccgtggattaccaaggaggagttagaaagagcacagggaa
ataagtatattataatcttaataagtaaataaattattaaaaaaaaattt
ccagtgcaagccgtgtctgtcaatcagaacttcttgtaggggtgggacct
caacatcagtgctttgtaaaccttgtggggtgatccaggttagggattag
tggttgcagaagcagttttcaagccatctagaacagggaaaataaaagtg
cagatcctgtactcgcagtatggaaggagacctcagagtctcgaattcac
agttcagggtagatgcattggcatctaataatcaggtacttatgga
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_100248707_100249854
seq2: B6Ng01-253F17.g_67_1212 (reverse)

seq1  TCCAT-AGTACCTTGAATTTATTAGAAGGCCAAATGCATTCTACCCTGGA  49
      ||||| |||||| |||  |||||||| |  | |||||| |||||||| ||
seq2  TCCATAAGTACC-TGA--TTATTAGATG--CCAATGCA-TCTACCCT-GA  43

seq1  CCTGTGAAATCGGAGACTCTGGGGTCTCCTTCCATACTGCGAGTACA-GA  98
       ||||||| || ||||||||| ||||||||||||||||||||||||| ||
seq2  ACTGTGAATTC-GAGACTCTGAGGTCTCCTTCCATACTGCGAGTACAGGA  92

seq1  TCTGCACTTTTATTTTCCTGGTTCTAGATGGCTTGAAAACTGCTTCTGC-  147
      ||||||||||||||||||  ||||||||||||||||||||||||||||| 
seq2  TCTGCACTTTTATTTTCCCTGTTCTAGATGGCTTGAAAACTGCTTCTGCA  142

seq1  ACCACTAATCCCTAAACCTGGATCA-CCCACAGGGTTTTACAAAGCACTG  196
      ||||||||||||| ||||||||||| |||||| || ||||||||||||||
seq2  ACCACTAATCCCT-AACCTGGATCACCCCACAAGG-TTTACAAAGCACTG  190

seq1  ATGTTGAGGTCCCA-CCCTACAAG-AGTTCTGATTGACAGACACGGCTTG  244
      |||||||||||||| ||||||||| |||||||||||||||||||||||||
seq2  ATGTTGAGGTCCCACCCCTACAAGAAGTTCTGATTGACAGACACGGCTTG  240

seq1  CACTGGAA--TTTTTTTTAATAATTTATTTACTTATTAAGATTATAATAT  292
      ||||||||  ||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGAAATTTTTTTTTAATAATTTATTTACTTATTAAGATTATAATAT  290

seq1  ACTTA-TTCCCTGTGCTCTTTCTAACTCCTCCTTGGTAATCCACGGCCTC  341
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATTTCCCTGTGCTCTTTCTAACTCCTCCTTGGTAATCCACGGCCTC  340

seq1  TCTTTCTTTATGTACATATAAATAAAATGTGTGGAGCATCTTCTTGATGT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTTATGTACATATAAATAAAATGTGTGGAGCATCTTCTTGATGT  390

seq1  TGCTTGTTGTGTATGTGTTCTGGGATGGCCATTTAATATTGGACAACATT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGTTGTGTATGTGTTCTGGGATGGCCATTTAATATTGGACAACATT  440

seq1  TGGTGTGCTCTTCCAGATTTCGAGGGAAGACGTTTAGGGAGCACACTAAT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTGCTCTTCCAGATTTCGAGGGAAGACGTTTAGGGAGCACACTAAT  490

seq1  TCTTCCACTCCCAGCATTCCTCAGGAGCTGAGTGATTTGTGTAGGGCTGA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCACTCCCAGCATTCCTCAGGAGCTGAGTGATTTGTGTAGGGCTGA  540

seq1  GGCCATGTGAGCTTTCCCCCTCCATGTCAACATATCTGTTCATGCCATAT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATGTGAGCTTTCCCCCTCCATGTCAACATATCTGTTCATGCCATAT  590

seq1  TTGCTTAGGTCATGTTAGACAGCCAGCTTCTAATTTTCAAATACTTAGAC  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTAGGTCATGTTAGACAGCCAGCTTCTAATTTTCAAATACTTAGAC  640

seq1  TAGATCTATACCCTATCTATACAGAATTATCTTTCATTTTTTCCCCTAAA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCTATACCCTATCTATACAGAATTATCTTTCATTTTTTCCCCTAAA  690

seq1  CCATGAAGATGTCAATCTTTTTTTCTAAGATTGTTTTACCCCTGGAACTG  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGAAGATGTCAATCTTTTTTTCTAAGATTGTTTTACCCCTGGAACTG  740

seq1  TGGTACACTGAGTTCCCCCTTGCAGGAACTTTCTATGTTGTCTGAGTTTG  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTACACTGAGTTCCCCCTTGCAGGAACTTTCTATGTTGTCTGAGTTTG  790

seq1  GGTTAACACACACCGAGACACAGACACGCACACTTTCACACACACTTTCT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAACACACACCGAGACACAGACACGCACACTTTCACACACACTTTCT  840

seq1  CTTTTGTGCACATGAGAGCACACGCACGTACACACACAGAGACACACAAG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGTGCACATGAGAGCACACGCACGTACACACACAGAGACACACAAG  890

seq1  TACACATGTGTGCTTACACACGTACAGTTCTCACACTGTTTTCAGTTATT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACATGTGTGCTTACACACGTACAGTTCTCACACTGTTTTCAGTTATT  940

seq1  TAACTTTTTTCAGTCATACTCTCTCGTACATTGCTAGATTTTTTCGGAGT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTTTTTCAGTCATACTCTCTCGTACATTGCTAGATTTTTTCGGAGT  990

seq1  GTGGCAAGTCAGTCACACACACACTGTTTCATCCCTCGCGCTTAAACAAG  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCAAGTCAGTCACACACACACTGTTTCATCCCTCGCGCTTAAACAAG  1040

seq1  ACCTATATTTTTTAAAGTGGGAGCTAAGTGTTTGCAGGATACTTGTAGCT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATATTTTTTAAAGTGGGAGCTAAGTGTTTGCAGGATACTTGTAGCT  1090

seq1  GTAATAGTTTCTGAAAGTACTTACCGAACTCTCCAGAACTGTTTTCTAAA  1141
      |||||||||||||||||||   ||||||||||||||||||||||||||||
seq2  GTAATAGTTTCTGAAAGTA-ACACCGAACTCTCCAGAACTGTTTTCTAAA  1139

seq1  GGAATTC  1148
      |||||||
seq2  GGAATTC  1146