BAC Information

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BAC

Clone NameB6Ng01-254O22
Chromosome14 (Build37)
Map Location 114,059,289 - 114,060,480
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043509, Tpm3-rs7, LOC100043510
Downstream geneLOC382947, LOC668791, LOC100043821, LOC100043521
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-254O22.bB6Ng01-254O22.g
ACCGA061268GA061269
length1,2021,177
definitionB6Ng01-254O22.b B6Ng01-254O22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctatttgttataataagaagacatgaactttagaaaaccatgaa
acttgtctttatttacaattatgtgattgtacagaaaaatgtaataaact
atattaaataagtgagataaatgaattaagagggaaaatcatgtgtatat
actgatgaacttaacacagttcccaaagttcaacatcccaattacttaca
aatttggagattttatctaaattgaatggcatttacagaaacaaagatgt
tacaaactttgcagtgacctgatctatcaggggccatctagaagaagcta
aggctaacaggtggacttcctggaggtggcctaccatttttttcgtggtc
tatgatagttgaccattatgaaaaaaagatcctaaagagacttcatatca
ggattgcttcgtgaacctgtgtttcactgtttaaagcacaaactgtggct
gttcacttaatttaccttcatggggacagctgagttttttacagaagctg
aaaaaaatatgtcacaaagatgagttttcaaacatcaggaaactggcaga
aacataaacaattgttttctgtaatttctttccaaagtgaagaacagaat
ctgtttttaatattaatgttgttgaatttttgttttaatagataatttat
gaatcagtttaagtgttatagaacaataccatttggtctgtgaaataata
ttaattatattttttattccaaaatgaatggtttgtgatttttattggat
ttctctgccaaacacaacaaatataataaaaatgtaaaatgggcatcttt
gtcttaactatgatgtaatgaggagaaaaggttttcttttttttactaca
tataatgttaattgtgagatgagaagccaatgaagagaaagacacacaca
tataatacacagaaatctcatcaacattgaaaactggaaaccataatgtc
ttaagccaaaacctgtagaaggaacaaaagtccacgcagagtgttatgat
aaaaaaccctctaaaaatcttctaaaaaatactatgggtttggtttgtat
agccatctactgctggcacacaggcttgaccttaactggtggtggtgtat
atgagaactcataacagagagaaaaactagtattctctgccaatgatgtc
aattggaatagctctgggtttgaagaatggagcttgcgtatttttaataa
gg
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtggatgctcacagttcagctaatggatggatcatagggctccc
aatgggaggagctagagaaagttagccaaagagctaaggatctgcaccct
aataggtggaacacattatgagctaacagtaccccggagctctgacctct
agctgcataatatattcaaaagatggcttagtcgccattcactggataga
gaagtccaattgactgcaactaatggcctagtacaggtattcaagctaaa
agggaatggcgtggccacagcgagcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_114059289_114060480
seq2: B6Ng01-254O22.b_44_1245

seq1  GAATTCCTATTTGTTATAATAAGAAGACATGAACTTTAGAAAACCATGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATTTGTTATAATAAGAAGACATGAACTTTAGAAAACCATGAA  50

seq1  ACTTGTCTTTATTTACAATTATGTGATTGTACAGAAAAATGTAATAAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTCTTTATTTACAATTATGTGATTGTACAGAAAAATGTAATAAACT  100

seq1  ATATTAAATAAGTGAGATAAATGAATTAAGAGGGAAAATCATGTGTATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAAATAAGTGAGATAAATGAATTAAGAGGGAAAATCATGTGTATAT  150

seq1  ACTGATGAACTTAACACAGTTCCCAAAGTTCAACATCCCAATTACTTACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATGAACTTAACACAGTTCCCAAAGTTCAACATCCCAATTACTTACA  200

seq1  AATTTGGAGATTTTATCTAAATTGAATGGCATTTACAGAAACAAAGATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGGAGATTTTATCTAAATTGAATGGCATTTACAGAAACAAAGATGT  250

seq1  TACAAACTTTGCAGTGACCTGATCTATCAGGGGCCATCTAGAAGAAGCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAACTTTGCAGTGACCTGATCTATCAGGGGCCATCTAGAAGAAGCTA  300

seq1  AGGCTAACAGGTGGACTTCCTGGAGGTGGCCTACCATTTTTTTCGTGGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTAACAGGTGGACTTCCTGGAGGTGGCCTACCATTTTTTTCGTGGTC  350

seq1  TATGATAGTTGACCATTATGAAAAAAAGATCCTAAAGAGACTTCATATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATAGTTGACCATTATGAAAAAAAGATCCTAAAGAGACTTCATATCA  400

seq1  GGATTGCTTCGTGAACCTGTGTTTCACTGTTTAAAGCACAAACTGTGGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGCTTCGTGAACCTGTGTTTCACTGTTTAAAGCACAAACTGTGGCT  450

seq1  GTTCACTTAATTTACCTTCATGGGGACAGCTGAGTTTTTTACAGAAGCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACTTAATTTACCTTCATGGGGACAGCTGAGTTTTTTACAGAAGCTG  500

seq1  AAAAAAATATGTCACAAAGATGAGTTTTCAAACATCAGGAAACTGGCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATATGTCACAAAGATGAGTTTTCAAACATCAGGAAACTGGCAGA  550

seq1  AACATAAACAATTGTTTTCTGTAATTTCTTTCCAAAGTGAAGAACAGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAAACAATTGTTTTCTGTAATTTCTTTCCAAAGTGAAGAACAGAAT  600

seq1  CTGTTTTTAATATTAATGTTGTTGAATTTTTGTTTTAATAGATAATTTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTTAATATTAATGTTGTTGAATTTTTGTTTTAATAGATAATTTAT  650

seq1  GAATCAGTTTAAGTGTTATAGAACAATACCATTTGGTCTGTGAAATAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCAGTTTAAGTGTTATAGAACAATACCATTTGGTCTGTGAAATAATA  700

seq1  TTAATTATATTTTTTATTCCAAAATGAATGGTTTGTGATTTTTATTGGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTATATTTTTTATTCCAAAATGAATGGTTTGTGATTTTTATTGGAT  750

seq1  TTCTCTGCCAAACACAACAAATATAATAAAAATGTAAAATGGGCATCTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGCCAAACACAACAAATATAATAAAAATGTAAAATGGGCATCTTT  800

seq1  GTCTTAACTATGATGTAATGAGGAGAAAAGGTTTTC-TTTTTTTACTACA  849
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GTCTTAACTATGATGTAATGAGGAGAAAAGGTTTTCTTTTTTTTACTACA  850

seq1  TATAATGTTAATTGTGAGATGAGAAGCCAATGAAGAGAAAGACACACACA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATGTTAATTGTGAGATGAGAAGCCAATGAAGAGAAAGACACACACA  900

seq1  TATAATACACAGAAATCTCATCAACATTGAAAACTGGAAACCATAATGTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATACACAGAAATCTCATCAACATTGAAAACTGGAAACCATAATGTC  950

seq1  -TAAGCCAAAACCTGTAGA--GGACAAAAGTCCACGCAGAGTGTTATGAT  996
       ||||||||||||||||||  | |||||||||||||||||||||||||||
seq2  TTAAGCCAAAACCTGTAGAAGGAACAAAAGTCCACGCAGAGTGTTATGAT  1000

seq1  -AAAAACCCTCTAAAAATC-TCT-AAAAATACTATTGGGTTTGGTTTGTA  1043
       |||||||||||||||||| ||| |||||||||| |||||||||||||||
seq2  AAAAAACCCTCTAAAAATCTTCTAAAAAATACTA-TGGGTTTGGTTTGTA  1049

seq1  TTAGCCATCTACTGCTGGGCACA-GGGCTTGACCTTAACT-GTGGT-GTG  1090
       ||||||||||||||| ||||||  ||||||||||||||| ||||| |||
seq2  -TAGCCATCTACTGCT-GGCACACAGGCTTGACCTTAACTGGTGGTGGTG  1097

seq1  TATATGAG-ACTCCATACAGAG---AAAACTAGTAATTTCTCTGCAAATG  1136
      |||||||| ||||   ||||||   ||||||||||  |||||||| ||| 
seq2  TATATGAGAACTCATAACAGAGAGAAAAACTAGTA--TTCTCTGCCAAT-  1144

seq1  GTTGTCAATTGGAGATAGCTTCTGG---TGTAGAGATTGAGTCTGCGTAT  1183
      | ||||||||||| ||||| |||||   || ||| || |||  |||||||
seq2  GATGTCAATTGGA-ATAGC-TCTGGGTTTGAAGA-ATGGAGCTTGCGTAT  1191

seq1  TTT--ATAAGG  1192
      |||  ||||||
seq2  TTTTAATAAGG  1202