BAC Information

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BAC

Clone NameB6Ng01-255K18
Chromosome14 (Build37)
Map Location 51,142,265 - 51,293,336
singlet/doubletdoublet
Overlap geneOlfr743-ps1, Olfr744, Olfr745, Olfr746
Upstream geneSlc35f4, 3632451O06Rik, LOC667006, Olfr722, Olfr723, Olfr724, LOC100041975, Olfr725, LOC100042882, Olfr726, Olfr727, Olfr728, Olfr729, Olfr730, Olfr731, Olfr732, Olfr733, Olfr734, Olfr735, Tlr11, Olfr736, Olfr737-ps1, Olfr738, Olfr739, Olfr740, Olfr741, GA_x5J8B7U07Q4-325-757, GA_x5J8B7TYL6J-3-280, Olfr742
Downstream geneOlfr747, Olfr748, Olfr749, Ttc5, Gm288, Rpph1, Parp2, Tep1, EG546611, Osgep, Apex1, Tmem55b, Pnp, LOC667034, LOC667210, Rnase10, Rnase9, Rnase11, Rnase12, Olfr750, GA_x5J8B7W5WBF-6267395-6266441, Rnase4, Ang1, Gm75, Rnase6, Rnase1, Ear5, Ear-ps1, Ang2, Ear14, Ear11, LOC100042187, EG633215, LOC100042203, LOC633238, EG638695, Vmn2r-ps110, LOC100042224, Vmn2r88, LOC100042247, V2r10, LOC100043041, EG434459, LOC100043031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255K18.bB6Ng01-255K18.g
ACCGA061824GA061825
length1,1301,120
definitionB6Ng01-255K18.b B6Ng01-255K18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(51,142,265 - 51,143,399)(51,292,206 - 51,293,336)
sequence
gaattcttctcaaatgtgtatttaattgccataatccatgctggggtctc
attttccatgacattactgcttttagatagatgttcttgagagtttaatt
ttataagtacaataaagagcactaagtggactccagctgcttaacaaata
ctatttatctaattctcaaaacaaatgacatgggcaggactgttaccatc
cattttccaacacatgaagaagttgtatcttgtctaacatacacagcaca
aaggctgaccttaaccctgatggtctagctctggaacctgggcatttcca
cacatacatttcgggccaatgaagccatggaatatgctgacatatatatt
gtctgaattggtggaaagttaactagtaaaaatgtaaaacatgacctcta
cttggtttatgagacagctttaacgggaaagaaaataaccataaaaaaca
cctaggacattaaagtatcgtccagaattccacagagccctgacctccta
cttctaaatcccgatttgtgggacacaacagaaagtagtcaataccagaa
ggaacagatcaattcacaacaatatgttagcaaaggagattcatatttaa
gcactaactgacaaagaataagtaacagcagtctagtgaaaacttaactt
ttccttaactcacatataactttattaacattgaaagctttcaaaagttt
cctactttgcaggagactatcttatagcttatccttgggaaactaccctg
agagggagcttcataaaacaacacactgcatgatgttaataaaaactcaa
cagctccaacctcaatacagataagaaataatttaatctacatggatgcc
tatagcctagaagcacaaacgcaggttgctcaaaaaagacaattacactt
tgaaatgcttacattgtattttattgattgcacattaaagaaatgtataa
atttataaatttatcaaactctgtgaatgtgaaagttaaattatcttttg
tcccacagcattataaaagctgtgtctggaaagtagtctgagaagccagg
aaaacaagtcttcagagagaacatgttaaatctactaagagtagttctgg
aatgatatcaatttatcaagcctttataaa
gaattctaaacttacgttgttaagcttgccctgagatttcttttatttat
ttatttatttatttatttatttatttatttatttttaaaaagcattcctg
ttttattatcctaaaataaaaagctatcatcagtcagcaatagaaaatcg
caaataaaaagtttaatttcagaatccaagtttgtcatttataaatacac
taaagcaaagtccaggcaaactcagaccgagcccacatacagtatttcaa
cacaacatttgttttctaaaagatcagaggcaatgagtgatttgtttcac
ccataatatttaactgatttgaaatgagaaaatgaaaacctttttttttt
tttttagacataaacaaaaactttggagtctggtaaagagtctgatagct
gatactttatgttggtatccttgggattctataatgtcccaatgatggtt
gaggcttccctatcataggaaaaaaaaatctaaatgcctaaggcttttct
catgactgcaataaacaagcgctttccctgtcaacaagctacctcctcaa
agtagaatctgagtgatatttggtcaaactgaggggtcagtgcatacttc
ttatgagatagctttattgtatagagatgcaaaaagtaaatcagaggcat
ggagattggatcagcaggccatctgttgtaaacgtgtcatattatgcact
ggtgaagtcctaagcatgactttaaaacctggatccaatttcaaggggct
catgataagcgggatatctctgagataactgaccgtgtaaaacctgaatg
caacacctgacatggaaccgttctcatgaccaattagccatgtgattgac
actccatggtatgcccaagttcagtttttgttttcaaatgccttgttctg
taaacagcttccagaaatattctctctagacatactttggagcctggtgg
ttaagaactgttcagtcaggatggcttaacctccacctcctatttacagg
gtttcatttacaggcacaaaaagctgtttgtgcaataaaatattcataaa
atacagcacctgatttgtggtttacacaactgaataaaaccctacataat
aaattgttaatcttcttcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_51142265_51143399
seq2: B6Ng01-255K18.b_42_1171

seq1  GAATTCTTCTCAAATGTGTATTTAATTGCCATAATCCATGCTGGGGTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTCAAATGTGTATTTAATTGCCATAATCCATGCTGGGGTCTC  50

seq1  ATTTTCCATGACATTACTGCTTTTAGATAGATGTTCTTGAGAGTTTAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCATGACATTACTGCTTTTAGATAGATGTTCTTGAGAGTTTAATT  100

seq1  TTATAAGTACAATAAAGAGCACTAAGTGGACTCCAGCTGCTTAACAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAGTACAATAAAGAGCACTAAGTGGACTCCAGCTGCTTAACAAATA  150

seq1  CTATTTATCTAATTCTCAAAACAAATGACATGGGCAGGACTGTTACCATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTATCTAATTCTCAAAACAAATGACATGGGCAGGACTGTTACCATC  200

seq1  CATTTTCCAACACATGAAGAAGTTGTATCTTGTCTAACATACACAGCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCCAACACATGAAGAAGTTGTATCTTGTCTAACATACACAGCACA  250

seq1  AAGGCTGACCTTAACCCTGATGGTCTAGCTCTGGAACCTGGGCATTTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTGACCTTAACCCTGATGGTCTAGCTCTGGAACCTGGGCATTTCCA  300

seq1  CACATACATTTCGGGCCAATGAAGCCATGGAATATGCTGACATATATATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATACATTTCGGGCCAATGAAGCCATGGAATATGCTGACATATATATT  350

seq1  GTCTGAATTGGTGGAAAGTTAACTAGTAAAAATGTAAAACATGACCTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAATTGGTGGAAAGTTAACTAGTAAAAATGTAAAACATGACCTCTA  400

seq1  CTTGGTTTATGAGACAGCTTTAACGGGAAAGAAAATAACCATAAAAAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTTTATGAGACAGCTTTAACGGGAAAGAAAATAACCATAAAAAACA  450

seq1  CCTAGGACATTAAAGTATCGTCCAGAATTCCACAGAGCCCTGACCTCCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGGACATTAAAGTATCGTCCAGAATTCCACAGAGCCCTGACCTCCTA  500

seq1  CTTCTAAATCCCGATTTGTGGGACACAACAGAAAGTAGTCAATACCAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAAATCCCGATTTGTGGGACACAACAGAAAGTAGTCAATACCAGAA  550

seq1  GGAACAGATCAATTCACAACAATATGTTAGCAAAGGAGATTCATATTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAGATCAATTCACAACAATATGTTAGCAAAGGAGATTCATATTTAA  600

seq1  GCACTAACTGACAAAGAATAAGTAACAGCAGTCTAGTGAAAACTTAACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTAACTGACAAAGAATAAGTAACAGCAGTCTAGTGAAAACTTAACTT  650

seq1  TTCCTTAACTCACATATAACTTTATTAACATTGAAAGCTTTCAAAAGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTAACTCACATATAACTTTATTAACATTGAAAGCTTTCAAAAGTTT  700

seq1  CCTACTTTGCAGGAGACTATCTTATAGCTTATCCTTGGGAAACTACCCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTTTGCAGGAGACTATCTTATAGCTTATCCTTGGGAAACTACCCTG  750

seq1  AGAGGGAGCTTCATAAAACAACACACTGCATGATGTTAATAAAAACTCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGAGCTTCATAAAACAACACACTGCATGATGTTAATAAAAACTCAA  800

seq1  CAGCTCCAACCTCAATACAGATAAGAAATAATTTAATCTACATGGATGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCCAACCTCAATACAGATAAGAAATAATTTAATCTACATGGATGCC  850

seq1  TATAGCCTAGAAGCACAAACGCAGGTTGCTCAAAAAAGACAATTACACTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCCTAGAAGCACAAACGCAGGTTGCTCAAAAAAGACAATTACACTT  900

seq1  TGAAATGCTTACATTGTATTTTATTGATTGCACATTAAAGAAATGTATAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGCTTACATTGTATTTTATTGATTGCACATTAAAGAAATGTATAA  950

seq1  ATTTATAAATTTATCAAACTCTGTGAATGTGGAAGTTAAA-TATCTTTTG  999
      ||||||||||||||||||||||||||||||| |||||||| |||||||||
seq2  ATTTATAAATTTATCAAACTCTGTGAATGTGAAAGTTAAATTATCTTTTG  1000

seq1  TCCCACAGCATTATAAAAGCTTGTGTCTGGAAAGGTAGGTCTGAGAAGCC  1049
      |||||||||||||||||||| |||||||||||| ||| ||||||||||||
seq2  TCCCACAGCATTATAAAAGC-TGTGTCTGGAAA-GTA-GTCTGAGAAGCC  1047

seq1  AGGAAAAC-AGTCTTCAGGAGAGGAAACATG-TAAATCTACTAAGGAGTT  1097
      |||||||| |||||||| |||||  |||||| |||||||||||| ||| |
seq2  AGGAAAACAAGTCTTCA-GAGAG--AACATGTTAAATCTACTAA-GAG-T  1092

seq1  AGTCCTTGAATGATATCAAATTTATC-AGGCTTTATAAA  1135
      ||| || |||||||||| |||||||| || |||||||||
seq2  AGTTCTGGAATGATATC-AATTTATCAAGCCTTTATAAA  1130

seq1: chr14_51292206_51293336
seq2: B6Ng01-255K18.g_66_1185 (reverse)

seq1  ATGAAAGGAAGATGTAAACAATTTTATTATGTAGGGTTTTTATTCAGTTG  50
      |||||  |||||  | ||||| |||||||||||||| |||||||||||||
seq2  ATGAA--GAAGA--TTAACAA-TTTATTATGTAGGG-TTTTATTCAGTTG  44

seq1  TGTAAAAACCACAAATCAGGTGCTGTATTTTAATTAAATATTTTAATTGC  100
      |||  |||||||||||||||||||||||||||  | |||||||| |||||
seq2  TGT--AAACCACAAATCAGGTGCTGTATTTTA--TGAATATTTT-ATTGC  89

seq1  AACAAAACAGC-TTTTGTGGCTGTTAAATGAAA-CCTGTAAATAGGAGGT  148
      |   ||||||| ||||||| ||| ||||||||| ||||||||||||||||
seq2  A--CAAACAGCTTTTTGTGCCTG-TAAATGAAACCCTGTAAATAGGAGGT  136

seq1  GGAGGTTAAGCCATCCTGACTGAACAGTTCTTAACCA-CAGGCTCCAAAA  197
      ||||||||||||||||||||||||||||||||||||| |||||||| |||
seq2  GGAGGTTAAGCCATCCTGACTGAACAGTTCTTAACCACCAGGCTCC-AAA  185

seq1  GTATGTCCTAGAGAGAATA-TTCTGGAAGCTGTTTACAGAACAAGGCATT  246
      |||||| |||||||||||| ||||||||||||||||||||||||||||||
seq2  GTATGT-CTAGAGAGAATATTTCTGGAAGCTGTTTACAGAACAAGGCATT  234

seq1  TGAAAAC-AAAACTGAACTTGGGCATACCATGGAGTGTCAATCACATGGC  295
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAACAAAAACTGAACTTGGGCATACCATGGAGTGTCAATCACATGGC  284

seq1  TAATTGGTCATGAGAACGGTTCCATGTCAGGTGTTGCATTCAGGTTTTAC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGGTCATGAGAACGGTTCCATGTCAGGTGTTGCATTCAGGTTTTAC  334

seq1  ACGGTCAGTTATCTCAGAGATATCCCGCTTATCATGAGCCCCTTGAAATT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGTCAGTTATCTCAGAGATATCCCGCTTATCATGAGCCCCTTGAAATT  384

seq1  GGATCCAGGTTTTAAAGTCATGCTTAGGACTTCACCAGTGCATAATATGA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCCAGGTTTTAAAGTCATGCTTAGGACTTCACCAGTGCATAATATGA  434

seq1  CACGTTTACAACAGATGGCCTGCTGATCCAATCTCCATGCCTCTGATTTA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTTTACAACAGATGGCCTGCTGATCCAATCTCCATGCCTCTGATTTA  484

seq1  CTTTTTGCATCTCTATACAATAAAGCTATCTCATAAGAAGTATGCACTGA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTGCATCTCTATACAATAAAGCTATCTCATAAGAAGTATGCACTGA  534

seq1  CCCCTCAGTTTGACCAAATATCACTCAGATTCTACTTTGAGGAGGTAGCT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCAGTTTGACCAAATATCACTCAGATTCTACTTTGAGGAGGTAGCT  584

seq1  TGTTGACAGGGAAAGCGCTTGTTTATTGCAGTCATGAGAAAAGCCTTAGG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGACAGGGAAAGCGCTTGTTTATTGCAGTCATGAGAAAAGCCTTAGG  634

seq1  CATTTAGATTTTTTTTTCCTATGATAGGGAAGCCTCAACCATCATTGGGA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAGATTTTTTTTTCCTATGATAGGGAAGCCTCAACCATCATTGGGA  684

seq1  CATTATAGAATCCCAAGGATACCAACATAAAGTATCAGCTATCAGACTCT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATAGAATCCCAAGGATACCAACATAAAGTATCAGCTATCAGACTCT  734

seq1  TTACCAGACTCCAAAGTTTTTGTTTATGTCTAAAAAAAAAAAAAAAGGTT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCAGACTCCAAAGTTTTTGTTTATGTCTAAAAAAAAAAAAAAAGGTT  784

seq1  TTCATTTTCTCATTTCAAATCAGTTAAATATTATGGGTGAAACAAATCAC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTTCTCATTTCAAATCAGTTAAATATTATGGGTGAAACAAATCAC  834

seq1  TCATTGCCTCTGATCTTTTAGAAAACAAATGTTGTGTTGAAATACTGTAT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGCCTCTGATCTTTTAGAAAACAAATGTTGTGTTGAAATACTGTAT  884

seq1  GTGGGCTCGGTCTGAGTTTGCCTGGACTTTGCTTTAGTGTATTTATAAAT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGCTCGGTCTGAGTTTGCCTGGACTTTGCTTTAGTGTATTTATAAAT  934

seq1  GACAAACTTGGATTCTGAAATTAAACTTTTTATTTGCGATTTTCTATTGC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAACTTGGATTCTGAAATTAAACTTTTTATTTGCGATTTTCTATTGC  984

seq1  TGACTGATGATAGCTTTTTATTTTAGGATAATAAAACAGGAATGCTTTTT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGATGATAGCTTTTTATTTTAGGATAATAAAACAGGAATGCTTTTT  1034

seq1  AAAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAAGAAA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAAGAAA  1084

seq1  TCTCAGGGCAAGCTTAACAACGTAAGTTTAGAATTC  1131
      ||||||||||||||||||||||||||||||||||||
seq2  TCTCAGGGCAAGCTTAACAACGTAAGTTTAGAATTC  1120