BAC Information

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BAC

Clone NameB6Ng01-256H10
Chromosome14 (Build37)
Map Location 44,259,666 - 44,260,786
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666318, EG546249, LOC100040863, LOC100040875, LOC100040890, LOC100042055, LOC635209, 1700091H14Rik, EG666415, LOC100040976, LOC100040983, LOC100042114, LOC666370, EG666376, LOC100041025, EG666396, LOC100041046, LOC100042130, LOC624893, LOC100041069, EG666420, LOC666436, EG638353, LOC666454, LOC100041106, EG638262, EG640992, EG666471, LOC666481, LOC100041143, EG666485, 1700049E17Rik, LOC666492, 1700001F09Rik, LOC673380, LOC100042326, EG666502, LOC545039, LOC100041227, LOC100041235, LOC100042342, LOC666322, EG666556, EG666561
Downstream geneLOC676304, Rbmxrtp, LOC673132, LOC100041300, LOC624717, LOC672977, EG666590, LOC100041327, EG623592, Ear1, Ear-ps12, Ear-ps9, Ear-ps8, Ang-ps3, Ear10, EG666451, LOC672161, Ang3, Ear-ps7, Ear-ps10, EG630952, EG666621, LOC100041356, LOC100041364, LOC100041371, LOC100041376, Ear-ps2, Ang-ps1, Ear2, LOC100041393, LOC100041422, EG666638, 4930503E14Rik, EG666647, EG624862, EG666660, EG666667, EG546250, EG666675, LOC100041494, LOC100041497, EG666678, LOC676402, BC061237, LOC434476, EG666707, LOC100042570, LOC666723, LOC673290, EG666725
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-256H10.bB6Ng01-256H10.g
ACCGA062417GA062418
length1,1121,157
definitionB6Ng01-256H10.b B6Ng01-256H10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaattttcctaggttacctggcacccatgcagagctcttgtggg
ttcaagataatgccatagaattgtcaaggctgaagcaaatctgttacctc
tcatgtaggataaccatgcagaataggcatgaaatgcctaattgatgaaa
tgcagaattgagaagttcctcagtgggtagggttagaggaaggaataacc
atttaaggccagctaaccagtgttgcgttgaaacttcaaactttcctgca
gggatggatcctgaaatagaggtcacatggctatggtggggagcatgtct
gtgcaaggctaggaagggagagcgatggatgatattgatcttaaccatac
tagatctcagagtttattgaagaagtactacttccagtggatgcttcatt
cttgtgaaggtctcctggaacagatctaatttctgagactaaatgtgagt
ctgagacttaacgtgtgaaagaaataatcccctgaatcccaaaactggtg
ctgtcaaaccatgacttttaagcagaagcctgagaaggattggggaaaga
gttaagttgcctactgtcttttctctcctctttcttttttcacagaaagg
gacagttttaaacacataggaaaacaatcatcatcaagtgatatgggtct
tcttgtccatctttcaattctctggtggatcctgagccttatttacttgt
aggtcttcagtgtagtgcttggctgttttggtaaatgctacctgttgggt
agcttaacctgatatttagtaatgctatttgagcaggtagataacagctt
gatatcagtctttaaacgactaaactgtcctgagtatgcagtgtggactg
agacacttactttactctttcagatagatattcctaggcttgaaagcagt
ctgtcagccactcttaaaggaccaatcttgtagcagccaaactgactatg
gagtcccaaattgccacttgccttgtagttgttgtagcagatgatgaagt
tacaggcctggcatatactcaggaacatggcctttttatagttcatcata
gcactggggaggtcaaagagtgaaaatattccatctcatcagacctggtg
agaaaaaaactg
gaattcccacctggggatccattccatatacagacaccaaactcagacac
tatcaaagattgcaagaagtgtttgatgacaggagcctgctacagctgtc
tcctcagaagctctgcctgagactgatgaatacagagacagatgcttgca
gcaaacctttggaatgagcatagggtccccagttgaggagttagagaaag
gattgaaggagctaaatgggtttgcaacaattggaagaacaactatgtca
aacaaccagataccccagagctcacaggaactaaaccaccaatcaaagag
tacacatcgagcaacccaaggctctagctacatatgcagcagacaatagc
cttgtcagacattaatgggatgagaggctcttgttcctttgaaggctcaa
tgccccagtgtaggggaatgccagggcaaggagacagcagtgtttgtgtg
agtggggaactctcagatgcagatggagggggcatgagataaaaggtttt
gaaacggaaactaggaaacaggataaaatttaaagtgtaagcttaaaata
ttttaaaatagaaaaaaaaaaaagaattgaagacccagaaatttaaccac
atatatggacacatggtctttgacaaagaagccaaaaatatacaatggaa
aaaagaaagcatcttcaataaattgtgctgatcctactggcagtaagtag
gtatgtagaaaaatgaaagtagatccatatttgtcacgaggaataaaact
caagtccaagtggatcaaacacttaacataaaaccagattcactgaatct
aattgaagagaaattgagaaagagcttcaaactcacaggaatatgggcaa
attttctaagtacgctccgatgactcagttctaacatcaaaaactgaaaa
tgggacctcatgaaactgaaaaacttatgtaaaggcaaaagggcatagcc
agtaggacaaattggtaacctaacatatgggaaaaattttcactacctaa
catccaaatatctaaagaactcaatagcttaacacaaaaagaaaaagaac
cagtctgaaatgtcattatgactgtagaaactcacaacgagcactggaat
gctgaagccttaagaatgtgcaaggtcttaggtcttcaaggcaaaatggc
aaacgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_44259666_44260786
seq2: B6Ng01-256H10.b_46_1157 (reverse)

seq1  CAGTTTTTTTCTCCAACAAGTCTGGATGAGATGGGATAATTTTTCCTTCT  50
      |||||||||||| || || |||| |||||||||| |||  |||||   ||
seq2  CAGTTTTTTTCT-CACCAGGTCT-GATGAGATGGAATA--TTTTC--ACT  44

seq1  CTTTGACCT-CCCAGTGCTATGATTGAACCTAATAAAAGGCCATGTTCCC  99
      ||||||||| ||||||||||||| |||| |||  ||||||||||||| ||
seq2  CTTTGACCTCCCCAGTGCTATGA-TGAA-CTATAAAAAGGCCATGTT-CC  91

seq1  TGAGTTATATTCCAGGCCTGTAACTTCATTCATCTGCTACAACAACTACA  149
      |||| ||||| ||||||||||||||||| |||||||||||||||||||||
seq2  TGAG-TATATGCCAGGCCTGTAACTTCA-TCATCTGCTACAACAACTACA  139

seq1  AGGCAAGTGGCAATTTGGGACTCCATAGTCAGTTTGGCTGCTACAAGATT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAGTGGCAATTTGGGACTCCATAGTCAGTTTGGCTGCTACAAGATT  189

seq1  GGTCC-TTAAGAGTGGCTGACAGACTGCTTTCAAGCCTAGGAATATCTAT  248
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTTTAAGAGTGGCTGACAGACTGCTTTCAAGCCTAGGAATATCTAT  239

seq1  CTGAAAGAGTAAAGTAAGTGTCTCAGTCCACACTGCATACTCAGGACAGT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAGAGTAAAGTAAGTGTCTCAGTCCACACTGCATACTCAGGACAGT  289

seq1  TTAGTCGTTTAAAGACTGATATCAAGCTGTTATCTACCTGCTCAAATAGC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCGTTTAAAGACTGATATCAAGCTGTTATCTACCTGCTCAAATAGC  339

seq1  ATTACTAAATATCAGGTTAAGCTACCCAACAGGTAGCATTTACCAAAACA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTAAATATCAGGTTAAGCTACCCAACAGGTAGCATTTACCAAAACA  389

seq1  GCCAAGCACTACACTGAAGACCTACAAGTAAATAAGGCTCAGGATCCACC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGCACTACACTGAAGACCTACAAGTAAATAAGGCTCAGGATCCACC  439

seq1  AGAGAATTGAAAGATGGACAAGAAGACCCATATCACTTGATGATGATTGT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATTGAAAGATGGACAAGAAGACCCATATCACTTGATGATGATTGT  489

seq1  TTTCCTATGTGTTTAAAACTGTCCCTTTCTGTGAAAAAAGAAAGAGGAGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTATGTGTTTAAAACTGTCCCTTTCTGTGAAAAAAGAAAGAGGAGA  539

seq1  GAAAAGACAGTAGGCAACTTAACTCTTTCCCCAATCCTTCTCAGGCTTCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGACAGTAGGCAACTTAACTCTTTCCCCAATCCTTCTCAGGCTTCT  589

seq1  GCTTAAAAGTCATGGTTTGACAGCACCAGTTTTGGGATTCAGGGGATTAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAAAAGTCATGGTTTGACAGCACCAGTTTTGGGATTCAGGGGATTAT  639

seq1  TTCTTTCACACGTTAAGTCTCAGACTCACATTTAGTCTCAGAAATTAGAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCACACGTTAAGTCTCAGACTCACATTTAGTCTCAGAAATTAGAT  689

seq1  CTGTTCCAGGAGACCTTCACAAGAATGAAGCATCCACTGGAAGTAGTACT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCCAGGAGACCTTCACAAGAATGAAGCATCCACTGGAAGTAGTACT  739

seq1  TCTTCAATAAACTCTGAGATCTAGTATGGTTAAGATCAATATCATCCATC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAATAAACTCTGAGATCTAGTATGGTTAAGATCAATATCATCCATC  789

seq1  GCTCTCCCTTCCTAGCCTTGCACAGACATGCTCCCCACCATAGCCATGTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCCCTTCCTAGCCTTGCACAGACATGCTCCCCACCATAGCCATGTG  839

seq1  ACCTCTATTTCAGGATCCATCCCTGCAGGAAAGTTTGAAGTTTCAACGCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTATTTCAGGATCCATCCCTGCAGGAAAGTTTGAAGTTTCAACGCA  889

seq1  ACACTGGTTAGCTGGCCTTAAATGGTTATTCCTTCCTCTAACCCTACCCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGGTTAGCTGGCCTTAAATGGTTATTCCTTCCTCTAACCCTACCCA  939

seq1  CTGAGGAACTTCTCAATTCTGCATTTCATCAATTAGGCATTTCATGCCTA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGAACTTCTCAATTCTGCATTTCATCAATTAGGCATTTCATGCCTA  989

seq1  TTCTGCATGGTTATCCTACATGAGAGGTAACAGATTTGCTTCAGCCTTGA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCATGGTTATCCTACATGAGAGGTAACAGATTTGCTTCAGCCTTGA  1039

seq1  CAATTCTATGGCATTATCTTGAACCCACAAGAGCTCTGCATGGGTGCCAG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCTATGGCATTATCTTGAACCCACAAGAGCTCTGCATGGGTGCCAG  1089

seq1  GTAACCTAGGAAAATTAGAATTC  1121
      |||||||||||||||||||||||
seq2  GTAACCTAGGAAAATTAGAATTC  1112