BAC Information

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BAC

Clone NameB6Ng01-256I10
Chromosome14 (Build37)
Map Location 7,509,142 - 7,510,273
singlet/doubletsinglet
Overlap geneLOC100042077
Upstream geneLOC100041817, LOC100041431, LOC100041438, LOC100041442, LOC100041848, LOC100041456, LOC100041758, LOC100041470, LOC100041804, LOC100041487, LOC100041747, LOC100041507, LOC100041836, LOC100041728, LOC100041774, LOC100041530, LOC100041540, LOC100041840, EG666844, LOC666851, LOC100041569, LOC100041970, LOC100042000, EG666874, B930046C15Rik, LOC100041600, LOC100041958, LOC100041964, LOC546590, LOC666906, LOC100042024, LOC100041664
Downstream geneLOC100041675, LOC666329, EG666833, LOC100042043, EG666918, LOC100041700, LOC100042054, LOC100042100, EG622781, LOC100041740, LOC100038847, LOC100042129, LOC100041770, LOC100042149, LOC544988, EG626456, LOC100041791, LOC100042164, LOC100042182, LOC100041808, LOC100042192, LOC100042207, EG432817, LOC100042217, LOC100041830, LOC100042235, EG545013, EG666947, LOC623215, LOC100042286, LOC666957, LOC100042263, LOC100042258, LOC100042272, LOC100041874, LOC100042304, LOC100041881, LOC100042312, LOC100041893
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-256I10.bB6Ng01-256I10.g
ACCGA062461GA062462
length1,1771,126
definitionB6Ng01-256I10.b B6Ng01-256I10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagttttatgtttgataccgaattccttacagaatgaaataaaa
tttttactacaataggatggcccgttatctgtcttaataagtttaggcaa
tcccatagcattaaaggcttgcaggcaatgatcaattacgttttcagaag
cctctcctgtatggagagaagggatcttgacggcatattgaagttaaatg
taccacaggtctcaaataagggtactgattgtgcaacatataaactgtca
gtaaagaaattaaaagcctcatgcacagactgaaagacctttagtacagc
tgttaatttggctaactgagccgaaaggccaggagtctctatgataactt
gttgattattaataagatatccagctcaccctttagaggagccatcagta
aatatcaatagagcattatataaaggctgtaaggaagtcattttaggaaa
tatcacatcacgtacatttcaaaattttatcaacctatcttgggggtagt
ggctgtctatagttcccttaaaaggcttaacaatgatatctggctctttg
cagaaataagttaatgtctgtcttcttccagtgatcatcatctgtgccac
tgctttgtgatatggcaagatactacatttaggagaaatctttgagtgta
tccacattaaaggaaattttttgccatagcagttccataggcacatgagt
cgtattaaaaattaacagatgcagggtcaaggagtaacctatataagtga
caaattgctcttcaatagctttttccactagctgtaaggccagcaatcct
tctgaggttagggatctaggggaagtgagggatgtgctctgaattaactt
tgctaggtaatttagaatataggaatctctaacattggactgaatattag
accagtctaggattgagttacaatgactggtcacactgaagaaaagagaa
aaatcattatactctattcaatgactaatttactaagtcagtatatacac
tctctgatgaactattgccaataaagtttaaagcctagatgctagtctaa
acctgggaaaaatgggcagcaagaatggaatctaaaacatgcatttaatt
aagtttaagttcattacatcaggaacctgagtcactttacttgccaggcc
tctttcacacggaaattaaatattgtc
gaattctgtgttgatcagagcagcctgcaaggctatgtttttataagtaa
cagatgcctgcactttgagaaattaattgcctggctcctggatgtgaagg
tgtgcaatgtgtctttaagcaatcagcatcctttcaaagagtaagaaata
aaacccgtcctcttccccaaataggcatgggccttagaccacctttcact
tcagtcacccttgactggattctgggaaatgttgctatataaaacctgaa
agtttaatgtgtaggttgaaatacaggataggtgccaaagtgacctttca
ctatatagagtgtggggaagagaacattagaatcataatcacattttggt
cccagcttgtgccctctgtcttctttacattaaaaggaaaagtctgaact
gtgttaggccttttactaggggtctttgtcttgacttgtctgtgaccaaa
tagtcagactaagacaaaggtcactaaaaggacattattttggttttggc
cgtgtataggctttctgtactctaggcactgatctggatctccgaccaag
gccatttgatgctattgtttcttagaaagttctcggcagtgtgtactagt
agttacagaatttcatattatagggccagaaggacttttgaagtccattt
caccccgtgttttccctcgctaaagggaataactgacacacaagagaggc
tgtctctgtgctaaaaggattgctctactgagaacccccccaccaagtcg
gtagagaattcaccattggaaaatcactaacagcactgtgaaggtttcta
aggtgggcagcaggaagcctgtccttttcctaccctctccctcagcccct
cttcccccacctgtgtaggattttgaggtcgaatgtgcattgtgcactgc
tgctgcaaaggtagctcttccctgtggctgtgctgaagcagctggccagg
gaaagccttgggagctgagctccagcctgtggattctctttcctcagact
tagtctgtaccagggagtggtgttctctcctgtgggtggtggttatatat
atcttacctttatattttgtcacgtagttccggtgcatctcaagccattc
tggatgcgctagattcactcttctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_7509142_7510273
seq2: B6Ng01-256I10.g_66_1191 (reverse)

seq1  TCAGAAAGAGTGATTCTAAAGCGCCCATCCAGAATGCCTGGAAGAATGCA  50
      |||| |||||||| ||||    || ||||||||||| || ||   |||||
seq2  TCAG-AAGAGTGAATCTA----GCGCATCCAGAATGGCTTGA--GATGCA  43

seq1  CC-GAACTACGTGAACAAAATATAAAGTAAAGAATATATATACACA-CAC  98
      || |||||||||| |||||||||||||  ||| |||||||||  || |||
seq2  CCGGAACTACGTG-ACAAAATATAAAGGTAAG-ATATATATAACCACCAC  91

seq1  CCACAGGAGAGAACACCACTCCCTGGTACAGACTAAAGTCTGAGGAAAGA  148
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CCACAGGAGAGAACACCACTCCCTGGTACAGACT-AAGTCTGAGGAAAGA  140

seq1  GAATCCACAGGCTGGAGCCTCAGCTCCC-AGGC-TTCCCTGGCCAGCTGC  196
      ||||||||||||||||| |||||||||| |||| ||||||||||||||||
seq2  GAATCCACAGGCTGGAG-CTCAGCTCCCAAGGCTTTCCCTGGCCAGCTGC  189

seq1  TTCAGCACAGCCACAGGGAAGAGCTACC-TTGCAGCAGCAGTGCACAATG  245
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTCAGCACAGCCACAGGGAAGAGCTACCTTTGCAGCAGCAGTGCACAATG  239

seq1  CACATTCGACCTCAAAATCCTACACAGGTGGGGGAAGAGGGGCTGAGGGA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTCGACCTCAAAATCCTACACAGGTGGGGGAAGAGGGGCTGAGGGA  289

seq1  GAGGGTAGGAAAAGGACAGGCTTCCTGCTGCCCACCTTAGAAACCTTCAC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTAGGAAAAGGACAGGCTTCCTGCTGCCCACCTTAGAAACCTTCAC  339

seq1  AGTGCTGTTAGTGATTTTCCAATGGTGAATTCTCTACCGACTTGGTGGGG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTGTTAGTGATTTTCCAATGGTGAATTCTCTACCGACTTGGTGGGG  389

seq1  GGGTTCTCAGTAGAGCAATCCTTTTAGCACAGAGACAGCCTCTCTTGTGT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCTCAGTAGAGCAATCCTTTTAGCACAGAGACAGCCTCTCTTGTGT  439

seq1  GTCAGTTATTCCCTTTAGCGAGGGAAAACACGGGGTGAAATGGACTTCAA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTTATTCCCTTTAGCGAGGGAAAACACGGGGTGAAATGGACTTCAA  489

seq1  AAGTCCTTCTGGCCCTATAATATGAAATTCTGTAACTACTAGTACACACT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCTTCTGGCCCTATAATATGAAATTCTGTAACTACTAGTACACACT  539

seq1  GCCGAGAACTTTCTAAGAAACAATAGCATCAAATGGCCTTGGTCGGAGAT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGAGAACTTTCTAAGAAACAATAGCATCAAATGGCCTTGGTCGGAGAT  589

seq1  CCAGATCAGTGCCTAGAGTACAGAAAGCCTATACACGGCCAAAACCAAAA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATCAGTGCCTAGAGTACAGAAAGCCTATACACGGCCAAAACCAAAA  639

seq1  TAATGTCCTTTTAGTGACCTTTGTCTTAGTCTGACTATTTGGTCACAGAC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTCCTTTTAGTGACCTTTGTCTTAGTCTGACTATTTGGTCACAGAC  689

seq1  AAGTCAAGACAAAGACCCCTAGTAAAAGGCCTAACACAGTTCAGACTTTT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAAGACAAAGACCCCTAGTAAAAGGCCTAACACAGTTCAGACTTTT  739

seq1  CCTTTTAATGTAAAGAAGACAGAGGGCACAAGCTGGGACCAAAATGTGAT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTAATGTAAAGAAGACAGAGGGCACAAGCTGGGACCAAAATGTGAT  789

seq1  TATGATTCTAATGTTCTCTTCCCCACACTCTATATAGTGAAAGGTCACTT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATTCTAATGTTCTCTTCCCCACACTCTATATAGTGAAAGGTCACTT  839

seq1  TGGCACCTATCCTGTATTTCAACCTACACATTAAACTTTCAGGTTTTATA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACCTATCCTGTATTTCAACCTACACATTAAACTTTCAGGTTTTATA  889

seq1  TAGCAACATTTCCCAGAATCCAGTCAAGGGTGACTGAAGTGAAAGGTGGT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAACATTTCCCAGAATCCAGTCAAGGGTGACTGAAGTGAAAGGTGGT  939

seq1  CTAAGGCCCATGCCTATTTGGGGAAGAGGACGGGTTTTATTTCTTACTCT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGCCCATGCCTATTTGGGGAAGAGGACGGGTTTTATTTCTTACTCT  989

seq1  TTGAAAGGATGCTGATTGCTTAAAGACACATTGCACACCTTCACATCCAG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAGGATGCTGATTGCTTAAAGACACATTGCACACCTTCACATCCAG  1039

seq1  GAGCCAGGCAATTAATTTCTCAAAGTGCAGGCATCTGTTACTTATAAAAA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCAGGCAATTAATTTCTCAAAGTGCAGGCATCTGTTACTTATAAAAA  1089

seq1  CATAGCCTTGCAGGCTGCTCTGATCAACACAGAATTC  1132
      |||||||||||||||||||||||||||||||||||||
seq2  CATAGCCTTGCAGGCTGCTCTGATCAACACAGAATTC  1126