BAC Information

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BAC

Clone NameB6Ng01-258A15
Chromosome14 (Build37)
Map Location 97,030,951 - 97,032,100
singlet/doubletsinglet
Overlap genenone
Upstream gene4921530L21Rik, Klhl1
Downstream geneLOC100043366, LOC668654
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258A15.bB6Ng01-258A15.g
ACCGA063579GA063580
length1,2461,162
definitionB6Ng01-258A15.b B6Ng01-258A15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctaaacctgataaacaatgtcagcaaagttgctggatacaaaat
taactcaaacaaatcagccttcctctactcaaagaataaacaggctgaga
aaaaaaaaattagggaaataacaccactcacaatcaccacaaataatata
aaataccttggtgttactctaaccaagcaagtgaaagattcatatgacaa
gaacttcaagtctctgaagaaagaaattgaagaagagctaaaaatggaag
tatctcccatgctcatggattagcaggatcaatatagtaaaaatggttat
cttgccaaaagcaatctacagattcaatgaaagctccatcaaaattccaa
tccaattcttcatagagttagaaaaagcaatttgcaaattcatttgtaat
aacaaaaaactcaggatagcaagaactcttcttaacaataaaaagaacat
ctgggggaatcactgtccctgacctcaagctgtattacagggcaatagtg
ataaaaactgtataatgtcggtaaagtgacaggcaggtagatcaacagaa
tagaattgaagacccagaaataaatccacacacctatggtcacttgatct
ttgaaaaaggagctaaaaaccatacagaaaacaaatcaaaacaaaacaaa
acaaaaacaaaaacatgttcaacaaatggtgctggttcaactggaggttg
gaatgtagaagaatgcaaatggatccattcttatctccttgtacaaagtt
caagtccaagtggatcaaggaactccacataaaaccagatacacagaaat
taatagaagagaaagcagggaagaaccttgaacacatgggcacaggggga
atttcctgaacagaacaccaatggcttatactctaagatcaacaatagaa
aaatgggacctcataaaatcccaaagcttctgcaaggcaaaagacactgc
caatagaacaaaacagcaatcaatgaattgcgaaaatctttaccaatctt
acatcagatagagggctaatatctatatatacaaagacttagaagttaga
ctccagagaacaaatacccttattaaaatggcatacatgtactctcagtc
tttatataattggatttatcccttacagatgtggggtagtgaagaatttt
tcccatcgtaggtgctgactggattaccatacgtcttgctacgagctcca
gtctagagtccattatcaatggtgtgaactaaggtgcagtgagcga

gaattccaggtgctagctggacatgtccttataggaaaagagaaggttta
atatgtaatctgtccctcaggtttaccatgggctgggtcatgcataccaa
gagcaaggaggaagcaatcctactcctgcgggtctcagtgagatatttgg
ggggcttgggcacatctcatcctcactcttgctttggagactgacttcca
cagttgcaaggctttttagccccatactagttgctggaatttaaatattg
tatatttaagataatttttttatttaattcctgcccctttctaaatagcc
tcttgcgatgccaatcagtacatcctaggacttgcaatctcctgctttag
tctctctagtaacagttatgggtctctcaaaaaggagcttgaatttactt
taaaacgtgtaggttgtatttctgacatcgctttgcatcttaacctcatc
atggtcgttgtgtgcagctagacattactaatagcctcttcttaacctta
gcgaacaataggtcagctataatagagccattttttttcattaaaattct
gattttgtggctcagcattcattctggatgtatgtggtaagccactattc
aacaaaagcagaagaaaataacacaaaagaattttcatgtcaggcttcaa
gaaacattatttgttgtgttgatgactgtaattttaaagcctatatcacc
acagttggtcaatgcttcgttttcccataggaagctatcaaagcagggca
gtatgaatgcttacttttccccagttcacactggtatttttaattttata
tatatattatataaaattataattaaatatattatatatataattaaaaa
taccagtgtgaatatatatatatgtatatatgtgtgtgtgtatatgtctg
tgtatatatatgtaatatatgtaatacatatatgtaatatacatatatgt
aatatatgaaatatatgtaatatatataataaatatatatgtaatataca
taatacatatatgtaatatatattacatatattacatatattgtatttat
ggtaatcttggaatttttttcttttttcctgttactttaacttctttaca
tttagttggtggaacttctaaacagttgatcaacttctcctccatactta
actctggttaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_97030951_97032100
seq2: B6Ng01-258A15.g_66_1227 (reverse)

seq1  TCTAA-CAGAGTTAAGTATGGAGGAGAAGTTGATCAAATGTTTAG-AGTT  48
      ||||| ||||||||||||||||||||||||||||||| ||||||| ||||
seq2  TCTAACCAGAGTTAAGTATGGAGGAGAAGTTGATCAACTGTTTAGAAGTT  50

seq1  C--ACAACTAAATGT-AAGA--GTAAAGTAACAGG-AAAAAGAAAAAATT  92
      |   ||||||||||| ||||   |||||||||||| |||||||||||| |
seq2  CCACCAACTAAATGTAAAGAAGTTAAAGTAACAGGAAAAAAGAAAAAAAT  100

seq1  CCAAAGATTA-CAT-AATAC-ATATATGTAATATATGT-ATATATATTAC  138
       | ||||||| ||| ||||| ||||||||||||||||| |||||||||||
seq2  TCCAAGATTACCATAAATACAATATATGTAATATATGTAATATATATTAC  150

seq1  ATATATGTATTATGTATATTACATATATATTTATTATATATATTACATAT  188
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGTATTATGTATATTACATATATATTTATTATATATATTACATAT  200

seq1  ATTTCATATATTACATATATGTATATTACATATATGTATTACATATATTA  238
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATATATTACATATATGTATATTACATATATGTATTACATATATTA  250

seq1  CATATATATACACAGACATATACACACACACATATATACATATATATATA  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATATACACAGACATATACACACACACATATATACATATATATATA  300

seq1  TTCACACTGGTATTTTTAATTATATATATAATATATTTAATTATAATTTT  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACACTGGTATTTTTAATTATATATATAATATATTTAATTATAATTTT  350

seq1  ATATAATATATATATAAAATTAAAAATACCAGTGTGAACTGGGGAAAAGT  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATATATATATAAAATTAAAAATACCAGTGTGAACTGGGGAAAAGT  400

seq1  AAGCATTCATACTGCCCTGCTTTGATAGCTTCCTATGGGAAAACGAAGCA  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATTCATACTGCCCTGCTTTGATAGCTTCCTATGGGAAAACGAAGCA  450

seq1  TTGACCAACTGTGGTGATATAGGCTTTAAAATTACAGTCATCAACACAAC  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCAACTGTGGTGATATAGGCTTTAAAATTACAGTCATCAACACAAC  500

seq1  AAATAATGTTTCTTGAAGCCTGACATGAAAATTCTTTTGTGTTATTTTCT  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATGTTTCTTGAAGCCTGACATGAAAATTCTTTTGTGTTATTTTCT  550

seq1  TCTGCTTTTGTTGAATAGTGGCTTACCACATACATCCAGAATGAATGCTG  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTTTGTTGAATAGTGGCTTACCACATACATCCAGAATGAATGCTG  600

seq1  AGCCACAAAATCAGAATTTTAATGAAAAAAAATGGCTCTATTATAGCTGA  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACAAAATCAGAATTTTAATGAAAAAAAATGGCTCTATTATAGCTGA  650

seq1  CCTATTGTTCGCTAAGGTTAAGAAGAGGCTATTAGTAATGTCTAGCTGCA  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTGTTCGCTAAGGTTAAGAAGAGGCTATTAGTAATGTCTAGCTGCA  700

seq1  CACAACGACCATGATGAGGTTAAGATGCAAAGCGATGTCAGAAATACAAC  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACGACCATGATGAGGTTAAGATGCAAAGCGATGTCAGAAATACAAC  750

seq1  CTACACGTTTTAAAGTAAATTCAAGCTCCTTTTTGAGAGACCCATAACTG  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACGTTTTAAAGTAAATTCAAGCTCCTTTTTGAGAGACCCATAACTG  800

seq1  TTACTAGAGAGACTAAAGCAGGAGATTGCAAGTCCTAGGATGTACTGATT  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAGAGAGACTAAAGCAGGAGATTGCAAGTCCTAGGATGTACTGATT  850

seq1  GGCATCGCAAGAGGCTATTTAGAAAGGGGCAGGAATTAAATAAAAAAATT  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCGCAAGAGGCTATTTAGAAAGGGGCAGGAATTAAATAAAAAAATT  900

seq1  ATCTTAAATATACAATATTTAAATTCCAGCAACTAGTATGGGGCTAAAAA  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAAATATACAATATTTAAATTCCAGCAACTAGTATGGGGCTAAAAA  950

seq1  GCCTTGCAACTGTGGAAGTCAGTCTCCAAAGCAAGAGTGAGGATGAGATG  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGCAACTGTGGAAGTCAGTCTCCAAAGCAAGAGTGAGGATGAGATG  1000

seq1  TGCCCAAGCCCCCCAAATATCTCACTGAGACCCGCAGGAGTAGGATTGCT  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCAAGCCCCCCAAATATCTCACTGAGACCCGCAGGAGTAGGATTGCT  1050

seq1  TCCTCCTTGCTCTTGGTATGCATGACCCAGCCCATGGTAAACCTGAGGGA  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTTGCTCTTGGTATGCATGACCCAGCCCATGGTAAACCTGAGGGA  1100

seq1  CAGATTACATATTAAACCTTCTCTTTTCCTATAAGGACATGTCCAGCTAG  1138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTACATATTAAACCTTCTCTTTTCCTATAAGGACATGTCCAGCTAG  1150

seq1  CACCTGGAATTC  1150
      ||||||||||||
seq2  CACCTGGAATTC  1162


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