BAC Information

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BAC

Clone NameB6Ng01-258D17
Chromosome14 (Build37)
Map Location 114,860,070 - 114,861,205
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043510, LOC382947, LOC668791, LOC100043821
Downstream geneLOC100043521, Gpc5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258D17.bB6Ng01-258D17.g
ACCGA063723GA063724
length1,2121,124
definitionB6Ng01-258D17.b B6Ng01-258D17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctaatcctctagcaccaagtctgcctgcaggctgccatgattt
ctgctataatgataatggactaaacctctgaaactgtaagcctgctccaa
ttaaatgttttcccttataagagttgccttggtcatgttgttccttcaca
gcaagagaacacaaactaagataggaactggaaaatcactgtgatagacc
agactatgattttgtttagaaaaatggggacttggggactttgggttagg
aaacagtggaatactttcagtggggcttaatggcccataatggaaggcag
tggtactgagggtgatttgaactgtgggagcttgacttaagaggttgcag
atgccgcagaccttttgggtccctatgtctgcgtggaacggggtctctcg
acgcgggtgggcaaagcgtggatgatgacagacagacacacacgcaggag
agtttgtgtggaatctgaatgtaattttacaactcgagcatcagactttt
tatgcagaggacaataaggaagttgggtgacatattcgcaaggtacaatt
gaggtaaccggaatcttacataaaacagaggaatgcaaacacaaaaggtc
taacgggaaccacccaggatagaatacattgataacagctggaatcaaca
agggctccacctaaaattcactaatcttagaagccagggtcaagggcttc
gcgtccttgccatagttcctattttagtctcttgtatagtccaccttccc
cttaggccattgtaaatatgtgtatgggtgtaactctgctatagtatcta
ttctggtttctcctttggtctgaaacttccttcttcctaagcgatggtaa
attcctgtgtaagggagtgacttagcttttacaatcttgctgaattctaa
acccttgatcttggtcgaggatgcccttggactgttggaacactggtgga
aagctttagccatgtcagagcacttataggaaaatactgaaagagagcac
gtggatccatactctagactagcgtggtactggaaactcggaatgaaaaa
ttaatgtatgggtagaagaacactagctcagaggaagagctctgaactct
ttgcctcaatgaagtgactttagcttcggcctggtcagtgactcgaacag
agaggctagccatgccagaaagaaaatatttaagatatatatgggctctg
aagaaaactact

gaattcatttcatttaaaattcatttcaatgaggaattattagtgattag
atttcttcatcttatttagaaacaaaatacattaaaaattcagagtttag
aatccatagtcccctctactttgtgtgttttaaagattataatgtctaca
tagaagagataaaatttgattaatatggattcatacctttcatggtaaca
atgagaattatagattcatttatgcatgttttcttatacttggtctggaa
ggaagctcatgacccatattagctttattaatgcttacattaccaggtaa
gtcagttactagctttgatattcatgtacacataaatataacaacttaaa
attttatacgatattattatttaatgagtggaaaaactagtgttggtccc
tatatattctggcttggaacaaataaataataatttgatattataaaatt
attgaattgtcattgttgcttgttacagttcaatgaaacaatgtttcaaa
aaaaagctatggtgtttaatattatccaaaataagtttcaagttctgtga
aaaagaaaattaaatccatagcagttacaccctgcctaggcacattagat
ttcctgatacatttttctatgaaacatattactacagggagaacaaagat
atgttgatgggtatatctcattccccatgacttggaagtaaacttttctt
ctagagaattcacttatgtttcatgttgtatttagagttttccccccaaa
ataatacaaagtcatgaggaagactttagaaatgggtatggcaggcaaga
gttcttctgctgatcaattctagaaacactgattttaggagtaaagcctc
tggcactttgtggatttcctttgcttagaaagatattgatttttgctttt
gtttgttgttttttccatttatttatttatttatttattgactttatatc
ctgattgctgaacttctgtccctatcacacatctcttcttaacctttcct
ctacttctctgaaagagtgggaccccccaaggatatcttctaccctagct
ctcatgtgctggtatatgtatccttcccactcagcagacaagtagtccag
taaggttacgatacaagacagtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_114860070_114861205
seq2: B6Ng01-258D17.g_67_1190 (reverse)

seq1  TGACTGTCTTTGTAATCTGTTTACCTAACTGGACTACCTTGTCTGGCCTG  50
      |||||||| |||||   |  | |||| ||||||||| ||||||||  |||
seq2  TGACTGTC-TTGTA---TCGTAACCTTACTGGACTA-CTTGTCTG--CTG  43

seq1  AGTGGGAAAGGATACATATAACCCAGCACATGAGGAGCTAGGGTAGAAGA  100
      |||||| |||||||||||||  ||||||||||| ||||||||||||||||
seq2  AGTGGG-AAGGATACATATA--CCAGCACATGA-GAGCTAGGGTAGAAGA  89

seq1  TATCCTTGGGGGGTCCCACTCTTTCAGAGAAGTAGAGG-AAGGTTAAGGA  149
      |||||||||||||||||||||||||||||||||||||| |||||||| ||
seq2  TATCCTTGGGGGGTCCCACTCTTTCAGAGAAGTAGAGGAAAGGTTAA-GA  138

seq1  AGAGATTGTGTGATAGGGACAGAAGTTCAGCAATCAGGATATAAAGTCAA  199
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGA-TGTGTGATAGGGACAGAAGTTCAGCAATCAGGATATAAAGTCAA  187

seq1  TAAATAAATAAATAAATAAATGGAAAAAACAACAAACAAAAGCAAAAATC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAATAAATAAATAAATGGAAAAAACAACAAACAAAAGCAAAAATC  237

seq1  AATATCTTTCTAAGCAAAGGAAATCCACAAAGTGCCAGAGGCTTTACTCC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCTTTCTAAGCAAAGGAAATCCACAAAGTGCCAGAGGCTTTACTCC  287

seq1  TAAAATCAGTGTTTCTAGAATTGATCAGCAGAAGAACTCTTGCCTGCCAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCAGTGTTTCTAGAATTGATCAGCAGAAGAACTCTTGCCTGCCAT  337

seq1  ACCCATTTCTAAAGTCTTCCTCATGACTTTGTATTATTTTGGGGGGAAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATTTCTAAAGTCTTCCTCATGACTTTGTATTATTTTGGGGGGAAAA  387

seq1  CTCTAAATACAACATGAAACATAAGTGAATTCTCTAGAAGAAAAGTTTAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAATACAACATGAAACATAAGTGAATTCTCTAGAAGAAAAGTTTAC  437

seq1  TTCCAAGTCATGGGGAATGAGATATACCCATCAACATATCTTTGTTCTCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAGTCATGGGGAATGAGATATACCCATCAACATATCTTTGTTCTCC  487

seq1  CTGTAGTAATATGTTTCATAGAAAAATGTATCAGGAAATCTAATGTGCCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGTAATATGTTTCATAGAAAAATGTATCAGGAAATCTAATGTGCCT  537

seq1  AGGCAGGGTGTAACTGCTATGGATTTAATTTTCTTTTTCACAGAACTTGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGGTGTAACTGCTATGGATTTAATTTTCTTTTTCACAGAACTTGA  587

seq1  AACTTATTTTGGATAATATTAAACACCATAGCTTTTTTTTGAAACATTGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTATTTTGGATAATATTAAACACCATAGCTTTTTTTTGAAACATTGT  637

seq1  TTCATTGAACTGTAACAAGCAACAATGACAATTCAATAATTTTATAATAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTGAACTGTAACAAGCAACAATGACAATTCAATAATTTTATAATAT  687

seq1  CAAATTATTATTTATTTGTTCCAAGCCAGAATATATAGGGACCAACACTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTATTATTTATTTGTTCCAAGCCAGAATATATAGGGACCAACACTA  737

seq1  GTTTTTCCACTCATTAAATAATAATATCGTATAAAATTTTAAGTTGTTAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTCCACTCATTAAATAATAATATCGTATAAAATTTTAAGTTGTTAT  787

seq1  ATTTATGTGTACATGAATATCAAAGCTAGTAACTGACTTACCTGGTAATG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATGTGTACATGAATATCAAAGCTAGTAACTGACTTACCTGGTAATG  837

seq1  TAAGCATTAATAAAGCTAATATGGGTCATGAGCTTCCTTCCAGACCAAGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCATTAATAAAGCTAATATGGGTCATGAGCTTCCTTCCAGACCAAGT  887

seq1  ATAAGAAAACATGCATAAATGAATCTATAATTCTCATTGTTACCATGAAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAAAACATGCATAAATGAATCTATAATTCTCATTGTTACCATGAAA  937

seq1  GGTATGAATCCATATTAATCAAATTTTATCTCTTCTATGTAGACATTATA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATGAATCCATATTAATCAAATTTTATCTCTTCTATGTAGACATTATA  987

seq1  ATCTTTAAAACACACAAAGTAGAGGGGACTATGGATTCTAAACTCTGAAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTAAAACACACAAAGTAGAGGGGACTATGGATTCTAAACTCTGAAT  1037

seq1  TTTTAATGTATTTTGTTTCTAAATAAGATGAAGAAATCTAATCACTAATA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATGTATTTTGTTTCTAAATAAGATGAAGAAATCTAATCACTAATA  1087

seq1  ATTCCTCATTGAAATGAATTTTAAATGAAATGAATTC  1136
      |||||||||||||||||||||||||||||||||||||
seq2  ATTCCTCATTGAAATGAATTTTAAATGAAATGAATTC  1124


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