BAC Information

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BAC

Clone NameB6Ng01-258M07
Chromosome14 (Build37)
Map Location 44,035,241 - 44,036,305
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666264, LOC100040787, EG666280, EG666285, LOC666298, LOC100042031, EG666318, EG546249, LOC100040863, LOC100040875, LOC100040890, LOC100042055, LOC635209, 1700091H14Rik, EG666415, LOC100040976, LOC100040983, LOC100042114, LOC666370, EG666376, LOC100041025, EG666396, LOC100041046, LOC100042130, LOC624893, LOC100041069, EG666420, LOC666436, EG638353, LOC666454, LOC100041106, EG638262, EG640992, EG666471, LOC666481, LOC100041143, EG666485, 1700049E17Rik, LOC666492, 1700001F09Rik
Downstream geneLOC673380, LOC100042326, EG666502, LOC545039, LOC100041227, LOC100041235, LOC100042342, LOC666322, EG666556, EG666561, LOC676304, Rbmxrtp, LOC673132, LOC100041300, LOC624717, LOC672977, EG666590, LOC100041327, EG623592, Ear1, Ear-ps12, Ear-ps9, Ear-ps8, Ang-ps3, Ear10, EG666451, LOC672161, Ang3, Ear-ps7, Ear-ps10, EG630952, EG666621, LOC100041356, LOC100041364, LOC100041371, LOC100041376, Ear-ps2, Ang-ps1, Ear2, LOC100041393, LOC100041422, EG666638, 4930503E14Rik, EG666647, EG624862, EG666660, EG666667, EG546250, EG666675, LOC100041494, LOC100041497
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258M07.bB6Ng01-258M07.g
ACCGA064122GA064123
length1,0051,060
definitionB6Ng01-258M07.b B6Ng01-258M07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccttgtttagctctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatctgatatagggtaggtaaagatcctttcccaatctgttggtggcct
ttctgtcttattgacagtgtttttgccttacagaagctttgcagtttcat
gaggtcccatttgtagattctccatcttacagcacaagccattgctgttc
tattcaggaatttttcccctatgccaatatctttgaggcttttccccact
ttctcctctataagtttcagtgtctctggttttatgtggagttgcttttg
tcaagatggaccttttttacaaaattattcctggtcatcattgaccatgg
gagatctttccatcttctatggtcttctttgatttctttgttcagagatt
ttatgtttttgttattcagttctttcccttgtttgtttagagtcacaaca
agatattttatacgtttgtgactattgtgaagtgtgcagtattttttttt
aatttttttcaaccccaataacttttgagtagatgaaagttgcaggatgg
ttcaagctaattttatatccatttattttgctgaagttgtttatcagctt
aggaattttctcatggatattttagggtcacatatatgtagtattgtata
ctcctcaaatagcagtctcttgaactcctcctttccgatttctatgtctt
tgatcctcattttttttccctgattgctctgactagaaactcaagtacta
ctttgaatacatagggggagagtgactatccttgtcctgtctccaatttt
atgggattgcttcaaatttctctacatatgtttttatgttgggcactgga
ttgctatatgttgcttttattatattccaatatgggaccgtgactttctg
acccctccagtacttttaacttgaagcttgttattgtatttttgtcaaag
gtttt
gaattccagaacaaatttaaaaccatgtcggtgtgctgggcatggtggtg
catgcctgtaatctcagcactcaggaggcagaggcaggtggatttctgca
ttcagttcaaggtaatcctggtatacaaagtgagctccaggacagccaga
gctatacagagaaaccctgtcttaaaaaaaacaaacaaacaaagaaatgc
cttgtgtagtagcataagaatactttaatctctgcacttgaaaggcagca
cttgcaggcagatatctgtgagtttgaggccaatatggtcccatgagtcc
caaaacaggcagggcttcatagagagaccctatctcaaagaataaataaa
tctaaaaataaagttctatacacacaatgaaaatgtgatatagttatgca
aggataacacaatagatgtaaatcaaataaatgtatctcagcacaaaaat
agtctcaaaaattaatagttgaattgtcatctcagtacctgcagaaaatg
cattgcacatgtccatcatcacctcatgataaaattcctgaagaaactag
gaataggagaaacatgcctcacccgaataaatcttctattcaacaaacat
agtcaacattatggtaatgggagagagaaaaggtctgtataaaacaagaa
acaagaccagagtatacattctctctgcctcattcaacataatacctgag
acttagaagcaatgagcaagtataaagaaacaagatagaaagagaaaata
aacatgtggatccctgcaaactctactttcattagggaagtggtcttggt
gaagtaagaagaaaagtaagatcagttcaaattagtcagcaaggctggtt
caaacttctggagcttggtgcctagtggatgaatttttacaaatctgaac
tcagtaaaactttggaaaatggttcctgttgacaggtactacaagaaaac
tttaggcatgactaggtcagaactcctcttcaaagtatatgacttcacaa
gcaccatgacttttcacccagatgagttgtcctgacagagaaaagcatgt
gagtctagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_44035241_44036305
seq2: B6Ng01-258M07.g_69_1128

seq1  GAATTCCAGAACAAATTTAAAACCATGTCGGTGTGCTGGGCATGGTGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAACAAATTTAAAACCATGTCGGTGTGCTGGGCATGGTGGTG  50

seq1  CATGCCTGTAATCTCAGCACTCAGGAGGCAGAGGCAGGTGGATTTCTGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCTGTAATCTCAGCACTCAGGAGGCAGAGGCAGGTGGATTTCTGCA  100

seq1  TTCAGTTCAAGGTAATCCTGGTCTACAAAGTGAGATCCAGGACAGCCAGA  150
      |||||||||||||||||||||| ||||||||||| |||||||||||||||
seq2  TTCAGTTCAAGGTAATCCTGGTATACAAAGTGAGCTCCAGGACAGCCAGA  150

seq1  GCTATACAGAGAAACCCTGTCTTAAAAAAAACAAACAAACAAAGAAATGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATACAGAGAAACCCTGTCTTAAAAAAAACAAACAAACAAAGAAATGC  200

seq1  CATGTGTAGTAGCATAAGAATACTTTAATCTCTGCACTTGAAAGGCAGCA  250
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGTAGTAGCATAAGAATACTTTAATCTCTGCACTTGAAAGGCAGCA  250

seq1  CTTGCAGGCAGATATCTGTGAGTTTGAGGCCAATATGGTCCCATGAGTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAGGCAGATATCTGTGAGTTTGAGGCCAATATGGTCCCATGAGTCC  300

seq1  CAAAACAGGCAGGGCTTCATAGAGAGACCCTATCTCAAAGAATAAATAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAGGCAGGGCTTCATAGAGAGACCCTATCTCAAAGAATAAATAAA  350

seq1  TCTAAAAATAAAGTTCTATACACACAATGAAAATGTGATTTAGTTATGCA  400
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TCTAAAAATAAAGTTCTATACACACAATGAAAATGTGATATAGTTATGCA  400

seq1  AGGATAACACAATAGATGTAAATCAAATAAATGTATCTCAGCACAAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAACACAATAGATGTAAATCAAATAAATGTATCTCAGCACAAAAAT  450

seq1  AGTCTCAAAAATTAATAGTTGAATTGTCATCTCAGTACCTGCAGAAAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCAAAAATTAATAGTTGAATTGTCATCTCAGTACCTGCAGAAAATG  500

seq1  CATTGGACATGTCCATCATCACCTCATGATAAAATTCCTGAAGAAACTAG  550
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCACATGTCCATCATCACCTCATGATAAAATTCCTGAAGAAACTAG  550

seq1  GTATAGGAGAAACATGCCTCACCCTAATAAATCTTCTATTCAACAAACAT  600
      | |||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GAATAGGAGAAACATGCCTCACCCGAATAAATCTTCTATTCAACAAACAT  600

seq1  AGTCAACATTATAGTAATGGGAGAGAGAGAAAGTCTGTATAAAATAAGAA  650
      |||||||||||| ||||||||||||||| || |||||||||||| |||||
seq2  AGTCAACATTATGGTAATGGGAGAGAGAAAAGGTCTGTATAAAACAAGAA  650

seq1  ACAAGACCAGAGTATAAATTCTCTCTACCTTATTCAACATAATACCTGAG  700
      |||||||||||||||| ||||||||| ||| |||||||||||||||||||
seq2  ACAAGACCAGAGTATACATTCTCTCTGCCTCATTCAACATAATACCTGAG  700

seq1  ACTTAGAAGCAATGAGCAAGTATAAAGAAACAAGATAGAAAGAGAAAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGAAGCAATGAGCAAGTATAAAGAAACAAGATAGAAAGAGAAAATA  750

seq1  AACATGTGGATCCCTGCAAACTCTACTTTCATTAGGGAAGTGGTCTTGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGTGGATCCCTGCAAACTCTACTTTCATTAGGGAAGTGGTCTTGGT  800

seq1  GAAGTAAGAAGAAAAGTAAGGTCAGTTCAAATTTGTCAGCAAGGCTGGTT  850
      |||||||||||||||||||| |||||||||||| ||||||||||||||||
seq2  GAAGTAAGAAGAAAAGTAAGATCAGTTCAAATTAGTCAGCAAGGCTGGTT  850

seq1  CAAACTTCTGGAGCTTGGTGCCTAGTGGATGAATTTTTACAAATCTGAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTTCTGGAGCTTGGTGCCTAGTGGATGAATTTTTACAAATCTGAAC  900

seq1  TCAGTAAAACTTTGGAAAATGGTTCCTGTTGACAGGTACTACAAGAAAAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTAAAACTTTGGAAAATGGTTCCTGTTGACAGGTACTACAAGAAAAC  950

seq1  TTTAGGCATGACTAGGTCAGAACTCCTCTTTACAGTTTATGA--TCAACC  998
      |||||||||||||||||||||||||||||| | ||| |||||  |||  |
seq2  TTTAGGCATGACTAGGTCAGAACTCCTCTTCAAAGTATATGACTTCA--C  998

seq1  AAGCACCCATGACCTTTTCACCCAGAATGAGTTGTCCTGACAGAGAAAAG  1048
      ||||| |||||| |||||||||||| ||||||||||||||||||||||| 
seq2  AAGCA-CCATGA-CTTTTCACCCAG-ATGAGTTGTCCTGACAGAGAAAA-  1044

seq1  GCATGTGAGTTCTAGTA  1065
      ||||||||| |||||||
seq2  GCATGTGAG-TCTAGTA  1060