BAC Information

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BAC

Clone NameB6Ng01-259K22
Chromosome14 (Build37)
Map Location 14,484,774 - 14,485,805
singlet/doubletsinglet
Overlap genenone
Upstream geneCadps, EG432822, LOC100042022, LOC100042026, EG328354, Synpr
Downstream geneA430083B19Rik, EG382844, LOC100042045, Gm281, Thoc7, Atxn7, Psmd6, Olfr720, LOC667125, LOC100042543, Olfr31, Il3ra, LOC627139, Olfr721-ps1, LOC667152, LOC100042147
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-259K22.bB6Ng01-259K22.g
ACCGA064801GA064802
length1,016500
definitionB6Ng01-259K22.b B6Ng01-259K22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttactttcattattgagcgtttgctctggtggagtaaccatagg
ctcttgccacagcttggagatgatgcaagtttatgtacatcaccgagcat
agcattgctgtctataatgattcttaactatagtagagtttgaggttgct
agatatctatctatctatctatctatctatctatctatctatctatcttt
tttttttttttttttttttttttttggtcttgtagctgatgccttcctgt
tcctttccttaacattccttttgcctgactcattggtgtttctagagact
ggctttcctagcaccaggctgaggtacaagaggcaaaaagaaaccaggca
ctccctgccacaatgctgtttgagtcctgaaagcctgtctgtattcttct
agaataatatttgtgttatctacaatgcttatgggtttatttgtaattta
gcaaggaaatgaaaaaaaaattacttactccatttttctgtttataaaaa
tctcaacaggattttagaaacatgcctatttaaatattcactatatgttt
cacacacagagtcagaaaggttaagtaactttcttaagagcatctatgct
gttgacatacttttgtttgttttatgccaataatagaatatacatttatg
gacagtattcttgtctatcccccttgcccttcagactctatggagtcata
tcccttatgagtgtctgtaattatctacatatgtagttatgtaatcctca
gcccatcttcatccatagtctacctacacctcttctgttgtgatgacata
atctgctcttgtccaagttgtcttttcaatgaaacctggtagcatacccc
cacaagaagagtttcaattttatggaaactatacatatccaaattgggcc
tcttgtttatatacttatgtatatctgcttagagtttgttactttatgag
tgctttgtgtttgttgccaactatgacactgggctccacatagtcagtgt
tgctgatttctcttgc
gaattctttgttcagttctgagccccattttttaatggggttgtttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtgcc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttatccaaacgctgacaccattgcatacactagcaagattttatcga
aaggacccagatgtagctgtctcttgtgagactatgccggggcctagcaa
acacagaagtggatgcccacagtcagctaatggatggatcacagggctcc
caatggaggagctagagaaagtacccaaggagctaaagggatctgcaacc
ctataggtggatcaacattatgaactaaccagtaccctggagctcttgac

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_14484774_14485805
seq2: B6Ng01-259K22.b_49_1064 (reverse)

seq1  GCAAGAAGAATCAGGCCAACACTGACTATGCTGAGCCCCAGTGTCCACTA  50
      ||||||  ||||||  ||||||||||||||  ||| |||||||||   ||
seq2  GCAAGAGAAATCAG--CAACACTGACTATGTGGAG-CCCAGTGTC--ATA  45

seq1  GCTCTGGCAACAAACCACCAAAGCACTTTCATTAAAAGTAAACAAACCTC  100
      |   |||||||||||   ||||||||  ||||  ||||| |||||| |||
seq2  G--TTGGCAACAAAC--ACAAAGCAC--TCAT--AAAGT-AACAAA-CTC  85

seq1  CTAAAGCAGATATTACATAAAGTATATAAACAAGAGGGCCCAATTTTGAT  150
         ||||||||| ||||| |||||||||||||||| |||||||||| |||
seq2  --TAAGCAGATA-TACAT-AAGTATATAAACAAGA-GGCCCAATTTGGAT  130

seq1  ATGTATAGTTTCCATAAAACCTGAAACTCTTCTTGT-GGGGTATGCTACC  199
      |||||||||||||||||||  ||||||||||||||| |||||||||||||
seq2  ATGTATAGTTTCCATAAAA-TTGAAACTCTTCTTGTGGGGGTATGCTACC  179

seq1  AGGTTTCATTGAAAAGACAACTTGGACAAGAGCAGATTATGTCATCACAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTCATTGAAAAGACAACTTGGACAAGAGCAGATTATGTCATCACAA  229

seq1  CAG-AGAGGTGTAGGTAGACTATGGATGAAGATGGGCTGAGGATTACATA  298
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGAGGTGTAGGTAGACTATGGATGAAGATGGGCTGAGGATTACATA  279

seq1  ACTACATATGTAGATAATTACAGACACTCATAA-GGATATGACTCCATAG  347
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ACTACATATGTAGATAATTACAGACACTCATAAGGGATATGACTCCATAG  329

seq1  AGTCTGAA-GGCAA-GGGGATAGACAAGAATACTGTCCATAAATGTATAT  395
      |||||||| ||||| |||||||||||||||||||||||||||||||||||
seq2  AGTCTGAAGGGCAAGGGGGATAGACAAGAATACTGTCCATAAATGTATAT  379

seq1  TCTATTATTGGCATAAAACAAACAAAAGTATGTCAACAGCATAGATGCTC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTATTGGCATAAAACAAACAAAAGTATGTCAACAGCATAGATGCTC  429

seq1  TTAAGAAAGTTACTTAACCTTTCTGACTCTGTGTGTGAAACATATAGTGA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAAAGTTACTTAACCTTTCTGACTCTGTGTGTGAAACATATAGTGA  479

seq1  ATATTTAAATAGGCATGTTTCTAAAATCCTGTTGAGATTTTTATAAACAG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTAAATAGGCATGTTTCTAAAATCCTGTTGAGATTTTTATAAACAG  529

seq1  AAAAATGGAGTAAGTAATTTTTTTTTCATTTCCTTGCTAAATTACAAATA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGGAGTAAGTAATTTTTTTTTCATTTCCTTGCTAAATTACAAATA  579

seq1  AACCCATAAGCATTGTAGATAACACAAATATTATTCTAGAAGAATACAGA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCATAAGCATTGTAGATAACACAAATATTATTCTAGAAGAATACAGA  629

seq1  CAGGCTTTCAGGACTCAAACAGCATTGTGGCAGGGAGTGCCTGGTTTCTT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTTTCAGGACTCAAACAGCATTGTGGCAGGGAGTGCCTGGTTTCTT  679

seq1  TTTGCCTCTTGTACCTCAGCCTGGTGCTAGGAAAGCCAGTCTCTAGAAAC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTCTTGTACCTCAGCCTGGTGCTAGGAAAGCCAGTCTCTAGAAAC  729

seq1  ACCAATGAGTCAGGCAAAAGGAATGTTAAGGAAAGGAACAGGAAGGCATC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATGAGTCAGGCAAAAGGAATGTTAAGGAAAGGAACAGGAAGGCATC  779

seq1  AGCTACAAGACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAGATAGATAGA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACAAGACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAGATAGATAGA  829

seq1  TAGATAGATAGATAGATAGATAGATAGATAGATATCTAGCAACCTCAAAC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAGATAGATAGATAGATAGATAGATAGATATCTAGCAACCTCAAAC  879

seq1  TCTACTATAGTTAAGAATCATTATAGACAGCAATGCTATGCTCGGTGATG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTATAGTTAAGAATCATTATAGACAGCAATGCTATGCTCGGTGATG  929

seq1  TACATAAACTTGCATCATCTCCAAGCTGTGGCAAGAGCCTATGGTTACTC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAAACTTGCATCATCTCCAAGCTGTGGCAAGAGCCTATGGTTACTC  979

seq1  CACCAGAGCAAACGCTCAATAATGAAAGTAAGAATTC  1032
      |||||||||||||||||||||||||||||||||||||
seq2  CACCAGAGCAAACGCTCAATAATGAAAGTAAGAATTC  1016