BAC Information

Click to search

BAC

Clone NameB6Ng01-261D12
Chromosome14 (Build37)
Map Location 26,736,080 - 26,737,226
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039411, Zmiz1, I920194n01, LOC100039007, 4931406H21Rik, Ppif, 2310047A01Rik, Anxa11, Plac9
Downstream geneD14Ertd449e, Cphx, 1110051B16Rik, LOC100039468, LOC100039484, LOC100039175, LOC100039192, LOC100039213, LOC100039227, LOC100039503, LOC100039246, LOC100039257, LOC100039280, LOC100039293, LOC100039527, LOC100039538, 4933413J09Rik, Slmap, LOC100039353, LOC665279, A630054L15Rik, Arf4, E430028B21Rik, 4921531P07Rik, Dnahc7c, Asb14, Appl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-261D12.bB6Ng01-261D12.g
ACCGA065943GA065944
length1,2301,146
definitionB6Ng01-261D12.b B6Ng01-261D12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatcagaccttcaaagaaaacctaataccaatactcttcaaact
attccacaaaatagaaacagaaggaacactacccaattcactctatgaag
tcccagttatgctgataccaagacctgacaaaaacccaacaaagaaagag
aacttcagaccaatttcccttatgaatatcaatgtaaaaatactcaataa
gattcttggaaaccaaatccaagaacacatcaaaactatcattcaccacg
atcaaataggattcattccagggatgcagggatggatggttactgaaatc
catcaatgtaaaccactacataaacaaactcaaagaaaaaaccacatgat
catttcattagatgatgaaaaagcatgtgacaaaattcaacatcccttca
tgttaaaagtcttagaaagatcaggacttcaaggcccatactttaacata
gtaaagacaatatacagcaaaccagtagccaacatcaaactaaatggaga
gaaacttgaagcaatcccactagaattagggactagacaaggctgtcctc
tctctccctatctgtgcaatatagtacttgaagttctaactagagcaatt
agacaacaaaaggagatcaaagggttacaaattggaaaggaagaagtcga
agtatcactatttgcagatgatatgatagaatacttaagtgacccccaaa
actccaccagagaactcctaaacctgataagcaacttcagcaaagtggct
ggatataaaattaactaaaacaaatcagtagcctttctccacacaaagga
taaaggactgaaaaagaaattagggaaacaatatccttcacaatagtcac
aaataatataaaatatcttggcgtgattctaaaggaagtgaaagctttgt
atgacaagaacttgaagtctctgaagaaagaaatcgaggaccttcagaag
atggaaagatctccaggctcatgggattggcaagactaatatagtaaaaa
tggccatcttgccaaaagcaattatacagattcaatgcaatcccaatcaa
aattcaaactcaattcttcataggagttagaaagagcaatttgtaattca
tctggatacaaaaaccagataggaaactgtcccacaataaaagaacctct
gggtgaatcacatgcctggactcaagcctgtacttaagagcaatttatgt
ataaaaaacctggtgcatggtatacttgct
gaattctttggggccatcctcctcacagtgaggactggaggttccgaaca
ctgtatggacatgcagaggagagtcctgggcatccttacttctaccccag
gagtctcagagctactaatatgaacttggactagtgtcttagactcagtc
acatcagcctagtcatcccaaactgcatgtctgacctagcctctcttcct
cattctgaaggtttaactcctaatgtgagaaaccagaatcatcattggag
tcacctacaaagtcccaggggacagtgcacagtggtcactcagtactcaa
gtcaagttggtacttactttcctgctggatgccatttcaaagaggcatct
caaagggctctttgttgtgggaaactctgctaattaaggtcaaagtctac
cattgattggatagccttctggggcttggcaagtaatgggggaatccctt
tattatcggggcttctccttctctgaccttgtctagggaattctaagccc
acacatatgcctctaccagaggaatgccacatagcctcaattagattaca
ggatcaatttcctttctcctgattaagacctattcagctagctcctatga
ttcctgaaatactttcccatgctaatgaggcattttagtaccctaagcct
tcagtctgccaacactgtataagccttgactcaccctacataaaggtgat
ctgcatcctgatgggtggtccagatgtggtcactggccatacacactcag
cccccaacccatcatctctgctcccttttcctgcatgaatcgtatcagct
gacaatccacaaaagtagggagaaaccacactttgttctaagcagtggaa
taattttcataaaaggaattggatagtggagtctacttcagacatgactt
ttcgtagaaaaacacattttcactgtgaatgtacaaacagtgggaatgac
tctaaaggcctggttagtcatcacaggcaatcagcccgggcacactttgt
tacagacaggcttttggagccgtgggggtcttgggacctagcttggaact
gcgagcttgggctgaatctgctttcctacctgctagttcttgcctttggt
tttgatttcttgagaaacatctcactagtagccaaggctagtcaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_26736080_26737226
seq2: B6Ng01-261D12.g_69_1214

seq1  GAATTCTTTGGGGCCATCCTCCTCACAGTGAGGACTGGAGGTTCCGAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGGGGCCATCCTCCTCACAGTGAGGACTGGAGGTTCCGAACA  50

seq1  CTGTATGGACATGCAGAGGAGAGTCCTGGGCATCCTTACTTCTACCCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATGGACATGCAGAGGAGAGTCCTGGGCATCCTTACTTCTACCCCAG  100

seq1  GAGTCTCAGAGCTACTAATATGAACTTGGACTAGTGTCTTAGACTCAGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTCAGAGCTACTAATATGAACTTGGACTAGTGTCTTAGACTCAGTC  150

seq1  ACATCAGCCTAGTCATCCCAAACTGCATGTCTGACCTAGCCTCTCTTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAGCCTAGTCATCCCAAACTGCATGTCTGACCTAGCCTCTCTTCCT  200

seq1  CATTCTGAAGGTTTAACTCCTAATGTGAGAAACCAGAATCATCATTGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTGAAGGTTTAACTCCTAATGTGAGAAACCAGAATCATCATTGGAG  250

seq1  TCACCTACAAAGTCCCAGGGGACAGTGCACAGTGGTCACTCAGTACTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTACAAAGTCCCAGGGGACAGTGCACAGTGGTCACTCAGTACTCAA  300

seq1  GTCAAGTTGGTACTTACTTTCCTGCTGGATGCCATTTCAAAGAGGCATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGTTGGTACTTACTTTCCTGCTGGATGCCATTTCAAAGAGGCATCT  350

seq1  CAAAGGGCTCTTTGTTGTGGGAAACTCTGCTAATTAAGGTCAAAGTCTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGGCTCTTTGTTGTGGGAAACTCTGCTAATTAAGGTCAAAGTCTAC  400

seq1  CATTGATTGGATAGCCTTCTGGGGCTTGGCAAGTAATGGGGGAATCCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGATTGGATAGCCTTCTGGGGCTTGGCAAGTAATGGGGGAATCCCTT  450

seq1  TATTATCGGGGCTTCTCCTTCTCTGACCTTGTCTAGGGAATTCTAAGCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATCGGGGCTTCTCCTTCTCTGACCTTGTCTAGGGAATTCTAAGCCC  500

seq1  ACACATATGCCTCTACCAGAGGAATGCCACATAGCCTCAATTAGATTACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATATGCCTCTACCAGAGGAATGCCACATAGCCTCAATTAGATTACA  550

seq1  GGATCAATTTCCTTTCTCCTGATTAAGACCTATTCAGCTAGCTCCTATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCAATTTCCTTTCTCCTGATTAAGACCTATTCAGCTAGCTCCTATGA  600

seq1  TTCCTGAAATACTTTCCCATGCTAATGAGGCATTTTAGTACCCTAAGCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGAAATACTTTCCCATGCTAATGAGGCATTTTAGTACCCTAAGCCT  650

seq1  TCAGTCTGCCAACACTGTATAAGCCTTGACTCACCCTACATAAAGGTGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCTGCCAACACTGTATAAGCCTTGACTCACCCTACATAAAGGTGAT  700

seq1  CTGCATCCTGATGGGTGGTCCAGATGTGGTCACTGGCCATACACACTCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATCCTGATGGGTGGTCCAGATGTGGTCACTGGCCATACACACTCAG  750

seq1  CCCCCAACCCATCATCTCTGCTCCCTTTTCCTGCATGAATCGTATCAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCAACCCATCATCTCTGCTCCCTTTTCCTGCATGAATCGTATCAGCT  800

seq1  GACAATCCACAAAAGTAGGGAG-AACCACACTTTGTTCTAAGCAGTGGAA  849
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GACAATCCACAAAAGTAGGGAGAAACCACACTTTGTTCTAAGCAGTGGAA  850

seq1  TAATTTTCATAAAAGGAATTGGATAGTGGAGTCTACTTCAGACATGAC-T  898
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TAATTTTCATAAAAGGAATTGGATAGTGGAGTCTACTTCAGACATGACTT  900

seq1  TTCGTAGAAAAACACA-TTTCACTGTGAATGTACAAACAGTGGGAATGAC  947
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTCGTAGAAAAACACATTTTCACTGTGAATGTACAAACAGTGGGAATGAC  950

seq1  TCT-AAGGCCTGGTTAGTCATCACCAGGCAATCAGCCC-GGCACAC-TTG  994
      ||| ||||||||||||||||||| |||||||||||||| ||||||| |||
seq2  TCTAAAGGCCTGGTTAGTCATCA-CAGGCAATCAGCCCGGGCACACTTTG  999

seq1  TTACAGGACCAGGC-TTTGGAGCCGT-GGGGTCT--GGGCCTAGGCTTTG  1040
      ||||||   ||||| ||||||||||| |||||||  || |||||   |||
seq2  TTACAG--ACAGGCTTTTGGAGCCGTGGGGGTCTTGGGACCTAG--CTTG  1045

seq1  GAACTGCGAGGTTTGGGCTTGATTCCTGGTTTCCTTACTTGCTAGTCCTT  1090
      ||||||||| | |||||||  ||  ||| ||||| ||| ||||||| |||
seq2  GAACTGCGA-GCTTGGGCTGAAT--CTGCTTTCC-TACCTGCTAGTTCTT  1091

seq1  G-CTTTTGTTTTGATTTCTTGAGAAACATCTCAAACTAGGTAGCCCAGGC  1139
      | |||| |||||||||||||||||||||||||  |||| |||||| ||||
seq2  GCCTTTGGTTTTGATTTCTTGAGAAACATCTC--ACTA-GTAGCCAAGGC  1138

seq1  TAGTCAGA  1147
      ||||||||
seq2  TAGTCAGA  1146