BAC Information

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BAC

Clone NameB6Ng01-262J13
Chromosome14 (Build37)
Map Location 22,476,228 - 22,617,625
singlet/doubletdoublet
Overlap geneMyst4, EG435391, Dusp13, Samd8
Upstream geneSynpo2l, Sec24c, Fut11, Chchd1, 2310021P13Rik, Ndst2, Camk2g, Plau, EG620119, Vcl, Ap3m1, Adk
Downstream geneVdac2, Comtd1, Zfp503, 1700112E06Rik, EG665075, EG435392, LOC665068
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-262J13.bB6Ng01-262J13.g
ACCGA066971GA066972
length1,168934
definitionB6Ng01-262J13.b B6Ng01-262J13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,616,468 - 22,617,625)(22,476,228 - 22,477,156)
sequence
gaattcaatgaaaaattattaaaattaaacattttaaagatgttaataac
aataggctcggtttggttcttcagacaatccactagttcagattaaaaga
gatgtgaagtaacaatggaaaaaagaaaacaaacaatagaatattccttc
tcccatcaaagcacaaagcttccttatgccaagatgggaaattcacagaa
taaagagtcctttgattaacacagtgtagaatgtatcctcaaaaacaact
tagtgtagctggagaaatagcttagagttcacagacctttgtactgaact
tgatacagtaattcatcatattagttatgtaaaatcagtgccactgaatc
tacaggcaaaccaacacctacttttacagtaattttagtcatttaaagct
attcataaggagaacaaacaaacaaaaccctttctctttccatccagtag
cctgaagcatctctgatggtactttaatcctcagctgcagaggtaatagg
ggtgactgggactaatctcactttttaataaacacaaactgttatgtaaa
gttgccattaaacctgatatgcttgtgagtttcaggacagtcagggctat
acagagaaaccctgtctcaaaaaaacaaacaaaaacaaaacaaaaaaaaa
ccctgacatgcttgctaggcagtaagtggtgatgcttgcctttaatccca
gcaacttggggaggcagaggcagaggcaaagacagaggcagaaaaatgtc
tgagttccaggacagcgaaggccacaaggagactcctgcacttgccatgg
ctgacgagaaacccaaggaaggagtcaagactgagaacaatgatcatatt
aatttgaaggtggcgggacaggatggttctgtggttgcagtgtaaagtta
agaggcatatacccacttataaactaattgaaagcctattgtgaacggca
gggtttgtcaattggaggcagattcagattccggttcgatgggccaacca
aatcagtggagaaataaggatcgaatgtatggtgcttccagcagcagact
ggaaggtgtctacctcaaaagggagccctgctacttaactccagaattgt
tatatacccaagaatcaatttctcaattacagcccaggttggtcccgcac
atcctggactccagtata
gaattcacataatccagacagatgggagctggaactgagtagcaagccaa
agtttatgctgtgtgtctgaggaggttcagatggtttggaagcagacaat
gacagatggaagtgtacacggatgaggggggacacttgtgaagatctctg
tcacacccttgcctctttttactcttgctccactatatcatcctgcatag
cacttgttcaaaacgagggaagttccaaataaatgagagttgggatcaaa
ttgattttgatttattcatgactgccaaaacaaactttgacctcatcaaa
tagttacctccataaagtgggtctaccctgctttcctagaggcagttagc
cattcagtctctggtcaggaccaggcagcgagaactgatactttaggccg
tcctcaatggaggccaggtggcctgtatgctctgcttggaaatgcttttt
tccctgcaagaggatcatctctgagtcaagcatgagagacttccgctgcc
ccttcgacctcacctttcccctggtatgcagttccagtgacgcagaggag
gaagtggatcatgctagtttggggtggttaatgcaggggatggtgtgtgg
gctactccgttttccattacgaggttctcactcatgactgagtgctcgtt
gcctgaatctttggctcaccgacaagttcaagggaatattcgcaccagca
gttaattatcctgaagctcctggggacttgtcttccacacgtcacttttc
gtctgaaacagtaggtttccccagggggtagttgaagtttttctgattga
aagtgtccctgcgttaagtgagaggtgtgagcacgccgtggggatctatt
caccaggggtgtatgtacttgtttcagaatgcttcagacaatacaccggt
ttccagattagtgctttttaattcccttgcatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_22616468_22617625
seq2: B6Ng01-262J13.b_45_1212 (reverse)

seq1  TATACTGTGTAGT-CAGGATGTGGCGGGACCAAACTGTGGCTTTTTAATT  49
      |||||  || ||| |||||||| |||||||||| ||| |||  | |||||
seq2  TATAC--TGGAGTCCAGGATGT-GCGGGACCAACCTG-GGC--TGTAATT  44

seq1  GAG-AATGTATTCTT-GGTCTATAACAAATTCTGGAGTAAAGTAGCA-GG  96
      ||| |||  |||||| ||| |||||| ||||||||||| |||||||| ||
seq2  GAGAAATTGATTCTTGGGTATATAAC-AATTCTGGAGTTAAGTAGCAGGG  93

seq1  CTCCCTTTTTAAGTAGACACC-TCCAGTCTGCTGCTGGAA-CA-CATACA  143
      ||||||||| | ||||||||| |||||||||||||||||| || ||||||
seq2  CTCCCTTTTGAGGTAGACACCTTCCAGTCTGCTGCTGGAAGCACCATACA  143

seq1  -TCGATCTTTA-TTCTCCACTGA-TTGGTT-GCCCATCGAACCGGAATCT  189
       |||||| ||| ||||||||||| |||||| |||||||||||||||||||
seq2  TTCGATCCTTATTTCTCCACTGATTTGGTTGGCCCATCGAACCGGAATCT  193

seq1  G-ATCTGCCTC--ATTGACAAACCCTGCCGTTCACAATAGGCTTTC-ATT  235
      | |||||||||  ||||||||||||||||||||||||||||||||| |||
seq2  GAATCTGCCTCCAATTGACAAACCCTGCCGTTCACAATAGGCTTTCAATT  243

seq1  AGTTTACTAAGT-GGTATATGCCTCTTAACCTTACACTGC-ACCACAGAA  283
      |||||| ||||| ||||||||||||||||| ||||||||| |||||||||
seq2  AGTTTA-TAAGTGGGTATATGCCTCTTAACTTTACACTGCAACCACAGAA  292

seq1  CCATCCTGTCCCGCCACCTTCAAATTAATATGATCATTGTTCTCAGTCTT  333
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCTGTCCCGCCACCTTCAAATTAATATGATCATTGTTCTCAGTCTT  342

seq1  GACTCCTTCCTTGGGTTTCTCGTCAGCCATGGCAAGTGCAGGAGTCTCCT  383
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCTTCCTTGGGTTTCTCGTCAGCCATGGCAAGTGCAGGAGTCTCCT  392

seq1  TGTGGCCTTCGCTGTCCTGGAACTCAGACATTTTTCTGCCTCTGTCTTTG  433
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCCTTCGCTGTCCTGGAACTCAGACATTTTTCTGCCTCTGTCTTTG  442

seq1  CCTCTGCCTCTGCCT-CCCAAGTTGCTGGGATTAAAGGCAAGCATCACCA  482
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CCTCTGCCTCTGCCTCCCCAAGTTGCTGGGATTAAAGGCAAGCATCACCA  492

seq1  CTTACTGCCTAGCAAGCATGTCAGGGTTTTTTTTTGTTTTGTTTTTGTTT  532
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTGCCTAGCAAGCATGTCAGGGTTTTTTTTTGTTTTGTTTTTGTTT  542

seq1  GTTTTTTTGAGACAGGGTTTCTCTGTATAGCCCTGACTGTCCTGAAACTC  582
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTTGAGACAGGGTTTCTCTGTATAGCCCTGACTGTCCTGAAACTC  592

seq1  ACAAGCATATCAGGTTTAATGGCAACTTTACATAACAGTTTGTGTTTATT  632
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCATATCAGGTTTAATGGCAACTTTACATAACAGTTTGTGTTTATT  642

seq1  AAAAAGTGAGATTAGTCCCAGTCACCCCTATTACCTCTGCAGCTGAGGAT  682
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGTGAGATTAGTCCCAGTCACCCCTATTACCTCTGCAGCTGAGGAT  692

seq1  TAAAGTACCATCAGAGATGCTTCAGGCTACTGGATGGAAAGAGAAAGGGT  732
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTACCATCAGAGATGCTTCAGGCTACTGGATGGAAAGAGAAAGGGT  742

seq1  TTTGTTTGTTTGTTCTCCTTATGAATAGCTTTAAATGACTAAAATTACTG  782
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTGTTTGTTCTCCTTATGAATAGCTTTAAATGACTAAAATTACTG  792

seq1  TAAAAGTAGGTGTTGGTTTGCCTGTAGATTCAGTGGCACTGATTTTACAT  832
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTAGGTGTTGGTTTGCCTGTAGATTCAGTGGCACTGATTTTACAT  842

seq1  AACTAATATGATGAATTACTGTATCAAGTTCAGTACAAAGGTCTGTGAAC  882
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAATATGATGAATTACTGTATCAAGTTCAGTACAAAGGTCTGTGAAC  892

seq1  TCTAAGCTATTTCTCCAGCTACACTAAGTTGTTTTTGAGGATACATTCTA  932
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGCTATTTCTCCAGCTACACTAAGTTGTTTTTGAGGATACATTCTA  942

seq1  CACTGTGTTAATCAAAGGACTCTTTATTCTGTGAATTTCCCATCTTGGCA  982
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTGTTAATCAAAGGACTCTTTATTCTGTGAATTTCCCATCTTGGCA  992

seq1  TAAGGAAGCTTTGTGCTTTGATGGGAGAAGGAATATTCTATTGTTTGTTT  1032
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAAGCTTTGTGCTTTGATGGGAGAAGGAATATTCTATTGTTTGTTT  1042

seq1  TCTTTTTTCCATTGTTACTTCACATCTCTTTTAATCTGAACTAGTGGATT  1082
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTTCCATTGTTACTTCACATCTCTTTTAATCTGAACTAGTGGATT  1092

seq1  GTCTGAAGAACCAAACCGAGCCTATTGTTATTAACATCTTTAAAATGTTT  1132
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAAGAACCAAACCGAGCCTATTGTTATTAACATCTTTAAAATGTTT  1142

seq1  AATTTTAATAATTTTTCATTGAATTC  1158
      ||||||||||||||||||||||||||
seq2  AATTTTAATAATTTTTCATTGAATTC  1168

seq1: chr14_22476228_22477156
seq2: B6Ng01-262J13.g_69_1002

seq1  GAATTCACATAATCCAGACAGATGGGAGCTGGAACTGAGTAGCAAGCCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATAATCCAGACAGATGGGAGCTGGAACTGAGTAGCAAGCCAA  50

seq1  AGTTTATGCTGTGTGTCTGAGGAGGTTCAGATGGTTTGGAAGCAGACAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTATGCTGTGTGTCTGAGGAGGTTCAGATGGTTTGGAAGCAGACAAT  100

seq1  GACAGATGGAAGTGTACACGGATGAGGGGGGACACTTGTGAAGATCTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGATGGAAGTGTACACGGATGAGGGGGGACACTTGTGAAGATCTCTG  150

seq1  TCACACCCTTGCCTCTTTTTACTCTTGCTCCACTATATCATCCTGCATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACCCTTGCCTCTTTTTACTCTTGCTCCACTATATCATCCTGCATAG  200

seq1  CACTTGTTCAAAACGAGGGAAGTTCCAAATAAATGAGAGTTGGGATCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGTTCAAAACGAGGGAAGTTCCAAATAAATGAGAGTTGGGATCAAA  250

seq1  TTGATTTTGATTTATTCATGACTGCCAAAACAAACTTTGACCTCATCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTTGATTTATTCATGACTGCCAAAACAAACTTTGACCTCATCAAA  300

seq1  TAGTTACCTCCATAAAGTGGGTCTACCCTGCTTTCCTAGAGGCAGTTAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTACCTCCATAAAGTGGGTCTACCCTGCTTTCCTAGAGGCAGTTAGC  350

seq1  CATTCAGTCTCTGGTCAGGACCAGGCAGCGAGAACTGATACTTTAGGCCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAGTCTCTGGTCAGGACCAGGCAGCGAGAACTGATACTTTAGGCCG  400

seq1  TCCTCAATGGAGGCCAGGTGGCCTGTATGCTCTGCTTGGAAATGCTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAATGGAGGCCAGGTGGCCTGTATGCTCTGCTTGGAAATGCTTTTT  450

seq1  TCCCTGCAAGAGGATCATCTCTGAGTCAAGCATGAGAGACTTCCGCTGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGCAAGAGGATCATCTCTGAGTCAAGCATGAGAGACTTCCGCTGCC  500

seq1  CCTTCGACCTCACCTTTCCCCTGGTATGCAGTTCCAGTGACGCAGAGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCGACCTCACCTTTCCCCTGGTATGCAGTTCCAGTGACGCAGAGGAG  550

seq1  GAAGTGGATCATGCTAGTTTGGGGTGGTTAATGCAGGGGATGGTGTGTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGGATCATGCTAGTTTGGGGTGGTTAATGCAGGGGATGGTGTGTGG  600

seq1  GCTACTCCG-TTTCCATTACGAGGTTCTCACTCATGACTGAGTGCTCGTT  649
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTCCGTTTTCCATTACGAGGTTCTCACTCATGACTGAGTGCTCGTT  650

seq1  GCCTGAATCTTTGGCTCACCGACAAGTTCAAGGGAATATTCGCACCAGCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGAATCTTTGGCTCACCGACAAGTTCAAGGGAATATTCGCACCAGCA  700

seq1  GTTAATTATCCTGAAGCTCCT-GGGACTTGTCTTCCACACGTCACTTTTC  748
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GTTAATTATCCTGAAGCTCCTGGGGACTTGTCTTCCACACGTCACTTTTC  750

seq1  GTCTGAAACAGTAGGTTTCCCCA-GGGGTAGTTGAAG-TTTTCTGATTGA  796
      ||||||||||||||||||||||| ||||||||||||| ||||||||||||
seq2  GTCTGAAACAGTAGGTTTCCCCAGGGGGTAGTTGAAGTTTTTCTGATTGA  800

seq1  AAGTGT-CCTGCGTTAAG-GAGAGGTGTGAGCACGCCGTGGGGATCTATT  844
      |||||| ||||||||||| |||||||||||||||||||||||||||||||
seq2  AAGTGTCCCTGCGTTAAGTGAGAGGTGTGAGCACGCCGTGGGGATCTATT  850

seq1  CACCAGGGGTGTATTGTACTTGTTTCAG-ATGCTTCAGGACAATACACCG  893
      ||||||||||||| |||||||||||||| |||||||| ||||||||||||
seq2  CACCAGGGGTGTA-TGTACTTGTTTCAGAATGCTTCA-GACAATACACCG  898

seq1  GCTTCCAAGATAAGTGCTTTTTATTTCCC-TGCATCT  929
      | |||| |||| ||||||||||| ||||| |||||||
seq2  GTTTCC-AGATTAGTGCTTTTTAATTCCCTTGCATCT  934