BAC Information

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BAC

Clone NameB6Ng01-263A04
Chromosome14 (Build37)
Map Location 105,255,437 - 105,256,601
singlet/doubletsinglet
Overlap genenone
Upstream genePou4f1, 2610206B13Rik, D130009I18Rik
Downstream geneLOC435420, Rbm26, LOC621103, LOC100043466, Ndfip2, LOC620376, LOC100043469
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-263A04.bB6Ng01-263A04.g
ACCGA067284GA067285
length1,1471,203
definitionB6Ng01-263A04.b B6Ng01-263A04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatatagaattgcctcagaactagacagatggaaacctctgcatt
ttgaagtttatttttgttttacttatgcttatttgtgtgtgattctgtat
gtgtttgccacgtatgtctgggtcctcacagaggccagaagaggttgtca
gagcccctggcaaactggatttgcaggcagttaggagccattccactctt
ttgcttcctgggaactaactcaagcagcaagttaatcactgagccagttc
tccaaccatgtaaaaaaaaaaaacaatttttaagtatatatttttagaaa
taataaaagcttgacttcaatctagtgtgcttgaaagcaggtttgtagct
ggatagaagagccaagggttttacaattagacaaaccttggtttgatttc
catctctaatacttagaggcatgattcttgacatgcctcccatagacccc
agtgttctctgcaggtcactaatatctgctgcacagggcttttcataagc
caacctctatgctgaggctttcctatcctgcaggttgagcatgagctctt
acatgtgtgggtacacggtgcacatgtggaagtatgaaattgatgtggag
tgtcttcccccattcactgaggcagcttctcctcgctgaacccagaaccc
accttctctggctattttagcttgccccagtgagcccttgactcttcgta
ggattacagatagtcaccaggcctagagcccagattttatttgggttgta
gggatctgtaccctgctcttccctcttgaggggtgagcattttatccact
gaaccatctcacttgcccctgtactgaaagaattttatgacatagtcaca
gacacggtaaatctcagtaattagcataagataataatactacataaaac
ataaaaatgaaatactacaaacacacacacatttctaaactagagacatg
cacaaatgaagtgaaacaggatctggtcagaaaggtaagagttacatctg
ggggactatgatcagagacagttatatacatgtctcaaatgcccagcgaa
cccactaatactacataataccgagctaacacttatatagataccaagtt
ctgtttagaaggctgcatggtcgatgccgatgcaaacctcccatcag
gaattcttttattgccatgttcacttagcagagtgaaagttgtaggttgt
cccctcggacccgtgccctacttagtctcatattcttggcctaattaaca
atgtcaggtgtgggttctgtctcatggagcagacctcaaccttccttaga
aagaggtttgttactcccctaacatttgtttctgtattgcactgatggtc
ggtcaggtgactgttgtccctcatacggttcgaatctgggtgagatggac
gatcacttcccctctgcaatacatatagcactttccagcactgtggatgc
tagtcagtaggggtgaagctgggttgggtaccagctccatgtcttcacgt
ttgatgacagtgagtatatggtgttttcagcagtagtgtcttgtcgtcag
gccgtagagggtaaccaatagccatggaaatagcctgtgatgttcagaga
aggtctatgggatccttttggacaatgactcaaaaagatgcaaaccattc
ttgccactggggtttttatttggcatgacagtgtctagttaaggtattga
cttgcagagatgtcctgcctgtttctggagtgctgggattaaaggtatat
gccatttctgcttggttccatttggcttttcaaaaggcctttagcattta
gttgtctctcactatattccgtcctttatgatgccctcccacgccccatc
tcgtttattcctcttgttgcaattttctccttatctctttataaagcttt
attctacttcctggactccttcttaagagtccacattgaggaccatttgc
attactgtgtattgttgacgttttgaaaaataagatatcaaacacctttt
ttttcttcttcttctttttgccattgttctagtatagagttttgttttca
gcttgatgggtccatacagcagaaccctgccaccggaggttttgaaatga
agatgggtttatgtaagcagctgtattctgttacccagtatcttgtgcct
tgcctcagggagaatattctgtatcccctagtgtttgatgcgctgtggat
ctgactcttgggagctgctgtcctcattgctggtgcctgcaaactgccgg
aaagcatggaagacatctccctcttggtcttcgaagttcaaggttcaggg
attcaagacttcagatcaagagtatcctgacaacgaaacacatggtgatg
gct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_105255437_105256601
seq2: B6Ng01-263A04.b_48_1194

seq1  GAATTCATATAGAATTGCCTCAGAACTAGACAGATGGAAACCTCTGCATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATAGAATTGCCTCAGAACTAGACAGATGGAAACCTCTGCATT  50

seq1  TTGAAGTTTATTTTTGTTTTACTTATGCTTATTTGTGTGTGATTCTGTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGTTTATTTTTGTTTTACTTATGCTTATTTGTGTGTGATTCTGTAT  100

seq1  GTGTTTGCCACGTATGTCTGGGTCCTCACAGAGGCCAGAAGAGGTTGTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTGCCACGTATGTCTGGGTCCTCACAGAGGCCAGAAGAGGTTGTCA  150

seq1  GAGCCCCTGGCAAACTGGATTTGCAGGCAGTTAGGAGCCATTCCACTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCCTGGCAAACTGGATTTGCAGGCAGTTAGGAGCCATTCCACTCTT  200

seq1  TTGCTTCCTGGGAACTAACTCAAGCAGCAAGTTAATCACTGAGCCAGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTCCTGGGAACTAACTCAAGCAGCAAGTTAATCACTGAGCCAGTTC  250

seq1  TCCAACCATGTAAAAAAAAAAAACAATTTTTAAGTATATATTTTTAGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACCATGTAAAAAAAAAAAACAATTTTTAAGTATATATTTTTAGAAA  300

seq1  TAATAAAAGCTTGACTTCAATCTAGTGTGCTTGAAAGCAGGTTTGTAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAAAGCTTGACTTCAATCTAGTGTGCTTGAAAGCAGGTTTGTAGCT  350

seq1  GGATAGAAGAGCCAAGGGTTTTACAATTAGACAAACCTTGGTTTGATTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGAAGAGCCAAGGGTTTTACAATTAGACAAACCTTGGTTTGATTTC  400

seq1  CATCTCTAATACTTAGAGGCATGATTCTTGACATGCCTCCCATAGACCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTAATACTTAGAGGCATGATTCTTGACATGCCTCCCATAGACCCC  450

seq1  AGTGTTCTCTGCAGGTCACTAATATCTGCTGCACAGGGCTTTTCATAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTCTCTGCAGGTCACTAATATCTGCTGCACAGGGCTTTTCATAAGC  500

seq1  CAACCTCTATGCTGAGGCTTTCCTATCCTGCAGGTTGAGCATGAGCTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTCTATGCTGAGGCTTTCCTATCCTGCAGGTTGAGCATGAGCTCTT  550

seq1  ACATGTGTGGGTACACGGTGCACATGTGGAAGTATGAAATTGATGTGGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTGTGGGTACACGGTGCACATGTGGAAGTATGAAATTGATGTGGAG  600

seq1  TGTCTTCCCCCATTCACTGAGGCAGCTTCTCCTCGCTGAACCCAGAACCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCCCCCATTCACTGAGGCAGCTTCTCCTCGCTGAACCCAGAACCC  650

seq1  ACCTTCTCTGGCTATTTTAGCTTGCCCCAGTGAGCCCTTGACTCTTCGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCTCTGGCTATTTTAGCTTGCCCCAGTGAGCCCTTGACTCTTCGTA  700

seq1  GGATTACAGATAGTCACCAGGCCTAGAGCCCAGATTTTATTTGGGTTGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTACAGATAGTCACCAGGCCTAGAGCCCAGATTTTATTTGGGTTGTA  750

seq1  GGGATCTGTACCCTGCTCTTCCCTCTTGAGGGGTGAGCATTTTATCCACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATCTGTACCCTGCTCTTCCCTCTTGAGGGGTGAGCATTTTATCCACT  800

seq1  GAACCATCTCACTTGCCCCTGTACTGAAAGAATTTTATGACATAGTCACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCATCTCACTTGCCCCTGTACTGAAAGAATTTTATGACATAGTCACA  850

seq1  GACACGGTAAATCTCAGTAATTAGCATAAGATAATAATACTACATAAAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACGGTAAATCTCAGTAATTAGCATAAGATAATAATACTACATAAAAC  900

seq1  ATAAAAATGAAAATACTACAAACAACAACAACAACATTTCTAAAACTAGA  950
      ||||||||| |||||||||||||    |||   |||||||| ||||||| 
seq2  ATAAAAATG-AAATACTACAAAC----ACACACACATTTCT-AAACTAG-  943

seq1  AGACAATGCACAAATGAAGTGAAACAGGATCTGGTCAGGAAAGGTAAGAG  1000
      |||| |||||||||||||||||||||||||||||||| ||||||||||| 
seq2  AGAC-ATGCACAAATGAAGTGAAACAGGATCTGGTCA-GAAAGGTAAGA-  990

seq1  GTTACATCTGGGGGACTATGATCAGAGAACAG-TATATACATGTCTCAAA  1049
      ||||||||||||||||||||||||||| |||| |||||||||||||| ||
seq2  GTTACATCTGGGGGACTATGATCAGAG-ACAGTTATATACATGTCTC-AA  1038

seq1  ATGCCACAGCGAAACCCACTAATACATACAATTAATA-CGAGCTAACAAC  1098
      ||||| ||||| ||||||||||||| ||||  ||||| ||||||||||  
seq2  ATGCC-CAGCG-AACCCACTAATAC-TACA--TAATACCGAGCTAACACT  1083

seq1  TATAATTAGGATA-CAAGTGCTGTTTTAGA--GCTGCGATGGCCCGTTGC  1145
      ||||  || |||| ||||| ||| ||||||  ||||| ||||  || || 
seq2  TATA--TA-GATACCAAGTTCTG-TTTAGAAGGCTGC-ATGG-TCGATG-  1126

seq1  CCGATGCAGA-CTCCCATCAG  1165
      |||||||| | ||||||||||
seq2  CCGATGCAAACCTCCCATCAG  1147