BAC Information

Click to search

BAC

Clone NameB6Ng01-263L11
Chromosome14 (Build37)
Map Location 22,804,791 - 22,805,938
singlet/doubletsinglet
Overlap geneZfp503
Upstream geneVcl, Ap3m1, Adk, Myst4, EG435391, Dusp13, Samd8, Vdac2, Comtd1
Downstream gene1700112E06Rik, EG665075, EG435392, LOC665068
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-263L11.g
ACCGA067811
length1,158
definitionB6Ng01-263L11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaggaaggatcctagagcgaccagggggttctggcatctttccca
aggatacggagtggggtgccacttagaattgcgcctggaagttgaaatgc
ttttcgcgggctgttacgaagggcactagaaccctaagtgcaggtttcta
aagggtttctctctttctctgtgtgaacccctccccatctgactccgcag
ctggacgccaagaagagcccactggcgctgctggctcaaacatgttcgca
gatagggaagccggacccttcgccttcttccaaactctcctcggtcgcct
ccaacggcggcggcgcgggtggtgcaggcaacggagctgggggcgacaag
gacgccaagtcgggccccttgaagctgagcgacatcggcgtggaggacaa
gtcgagtttcaagccttactccaaacccggttcagataagaaggagccgg
gaggcggcggcggaggcggcggcggcgggggcggcggcgggggtgttgct
gcagagaagtcaggattccgggtaccgagcgccacctgccagccatttac
gcccaggacaggcagtcccagctccagcgcctcggcctgttcgccgggag
gcatgctgccctccgccgggggtggcccggagggcaaggacgacaagaaa
gatccggaagctggcggcggtggcagcagcaaaggctccgggggcgcctc
ggcagacggggtacccgccgggctggggcacggccggattagctgcggcg
gcggaattaacgtggacgtgaaccagcactcggaagggggtccaggaggc
aaggctctaggctcggactgtggcggctcttccagctcaagctcgggttc
gggccccagcgcgcccacctcgtcgtcggttttgggctccggtctggtgg
ccccggtatctccctacaaccgggccagacagtgttccctctaccccctg
cgggcatgacctacccaggcagcctggctggggcctacgctggctacccg
cctcagttcttgccacacggtggtggcactcgacccaacttaacctggca
gcctggtagggccttcaagctggcagcggcgcagcgggtctatcttgggc
tgcagtaggccagcgaagaatcagtcctcttggccgcgaggcggtcctcc
ctccatca
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_22804791_22805938
seq2: B6Ng01-263L11.g_69_1226 (reverse)

seq1  TGATGGAGG--CGACGCCC---CGGCC-AGAGGACTCGAACC--CGCTGG  42
      |||||||||   |||  ||   ||||| |||||||| ||  |  ||||||
seq2  TGATGGAGGGAGGACCGCCTCGCGGCCAAGAGGACT-GATTCTTCGCTGG  49

seq1  CTTACTGCAG-CCAAGAGAG-CCGGCTGCGGCCGCTGCCAGCT--GAGCC  88
      | |||||||| |||||| || || ||||| |||||||||||||   || |
seq2  CCTACTGCAGCCCAAGATAGACCCGCTGC-GCCGCTGCCAGCTTGAAGGC  98

seq1  CCTACCAGGCTGCCAGGTTTAGTGGGGTCGAGTGCCA-CACCGTGTGGCA  137
      ||||||||||||||||||| ||| ||||||||||||| ||||||||||||
seq2  CCTACCAGGCTGCCAGGTTAAGTTGGGTCGAGTGCCACCACCGTGTGGCA  148

seq1  AGAACTGGGGCGGGTAGCCAGCGTAGGCCCCAGCCAGGCTGCCTGGGTAG  187
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTGAGGCGGGTAGCCAGCGTAGGCCCCAGCCAGGCTGCCTGGGTAG  198

seq1  GTCATGCCCGCAGGGGGTAGAGGGAACACTGTCTGGCCCGGTTTGTAGGG  237
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GTCATGCCCGCAGGGGGTAGAGGGAACACTGTCTGGCCCGG-TTGTAGGG  247

seq1  AGATACCGGGGCCACCAGACCGGAGCCCAAAACCGACGACGAGGTGGGCG  287
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACCGGGGCCACCAGACCGGAGCCCAAAACCGACGACGAGGTGGGCG  297

seq1  CGCTGGGGCCCGAACCCGAGCTTGAGCTGGAAGAGCCGCCACAGTCCGAG  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTGGGGCCCGAACCCGAGCTTGAGCTGGAAGAGCCGCCACAGTCCGAG  347

seq1  CCTAGAGCCTTGCCTCCTGGACCCCCTTCCGAGTGCTGGTTCACGTCCAC  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGAGCCTTGCCTCCTGGACCCCCTTCCGAGTGCTGGTTCACGTCCAC  397

seq1  GTTAATTCCGCCGCCGCAGCTAATCCGGCCGTGCCCCAGCCCGGCGGGTA  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATTCCGCCGCCGCAGCTAATCCGGCCGTGCCCCAGCCCGGCGGGTA  447

seq1  CCCCGTCTGCCGAGGCGCCCCCGGAGCCTTTGCTGCTGCCACCGCCGCCA  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGTCTGCCGAGGCGCCCCCGGAGCCTTTGCTGCTGCCACCGCCGCCA  497

seq1  GCTTCCGGATCTTTCTTGTCGTCCTTGCCCTCCGGGCCACCCCCGGCGGA  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCGGATCTTTCTTGTCGTCCTTGCCCTCCGGGCCACCCCCGGCGGA  547

seq1  GGGCAGCATGCCTCCCGGCGAACAGGCCGAGGCGCTGGAGCTGGGACTGC  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGCATGCCTCCCGGCGAACAGGCCGAGGCGCTGGAGCTGGGACTGC  597

seq1  CTGTCCTGGGCGTAAATGGCTGGCAGGTGGCGCTCGGTACCCGGAATCCT  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCTGGGCGTAAATGGCTGGCAGGTGGCGCTCGGTACCCGGAATCCT  647

seq1  GACTTCTCTGCAGCAACACCCCCGCCGCCGCCCCCGCCGCCGCCGCCTCC  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCTCTGCAGCAACACCCCCGCCGCCGCCCCCGCCGCCGCCGCCTCC  697

seq1  GCCGCCGCCTCCCGGCTCCTTCTTATCTGAACCGGGTTTGGAGTAAGGCT  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGCCGCCTCCCGGCTCCTTCTTATCTGAACCGGGTTTGGAGTAAGGCT  747

seq1  TGAAACTCGACTTGTCCTCCACGCCGATGTCGCTCAGCTTCAAGGGGCCC  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTCGACTTGTCCTCCACGCCGATGTCGCTCAGCTTCAAGGGGCCC  797

seq1  GACTTGGCGTCCTTGTCGCCCCCAGCTCCGTTGCCTGCACCACCCGCGCC  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGGCGTCCTTGTCGCCCCCAGCTCCGTTGCCTGCACCACCCGCGCC  847

seq1  GCCGCCGTTGGAGGCGACCGAGGAGAGTTTGGAAGAAGGCGAAGGGTCCG  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGCCGTTGGAGGCGACCGAGGAGAGTTTGGAAGAAGGCGAAGGGTCCG  897

seq1  GCTTCCCTATCTGCGAACATGTTTGAGCCAGCAGCGCCAGTGGGCTCTTC  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCCTATCTGCGAACATGTTTGAGCCAGCAGCGCCAGTGGGCTCTTC  947

seq1  TTGGCGTCCAGCTGCGGAGTCAGATGGGGAGGGGTTCACACAGAGAAAGA  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCGTCCAGCTGCGGAGTCAGATGGGGAGGGGTTCACACAGAGAAAGA  997

seq1  GAGAAACCCTTTAGAAACCTGCACTTAGGGTTCTAGTGCCCTTCGTAACA  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAACCCTTTAGAAACCTGCACTTAGGGTTCTAGTGCCCTTCGTAACA  1047

seq1  GCCCGCGAAAAGCATTTCAACTTCCAGGCGCAATTCTAAGTGGCACCCCA  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCGCGAAAAGCATTTCAACTTCCAGGCGCAATTCTAAGTGGCACCCCA  1097

seq1  CTCCGTATCCTTGGGAAAGATGCCAGAACCCCCTGGTCGCTCTAGGATCC  1137
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCGTATCCTTGGGAAAGATGCCAGAACCCCCTGGTCGCTCTAGGATCC  1147

seq1  TTCCTGAATTC  1148
      |||||||||||
seq2  TTCCTGAATTC  1158