BAC Information

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BAC

Clone NameB6Ng01-266G13
Chromosome14 (Build37)10 (Build37)
Map Location 60,423,463 - 60,423,79448,130,465 - 48,131,498
singlet/doubletsingletsinglet
Overlap geneAtp8a2
Upstream geneEG668177, EG668182, 1700129C05Rik, EG380907, Rcbtb1, EG628693, Phf11, EG236451, D14Ertd668e, EG628705, Setdb2, Cab39l, Cdadc1, Tmem46
Downstream geneLOC668162, LOC628768, Nupl1, Mtmr6, 2600011E07Rik, Ppia-ps14_696.1, EG628836, Spata13, C1qtnf9, Mipep
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266G13.bB6Ng01-266G13.g
ACCGA069813GA069814
length1,0091,035
definitionB6Ng01-266G13.b B6Ng01-266G13.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(60,423,463 - 60,423,794)(48,130,465 - 48,131,498)
sequence
gaattcaaattgatacataactatctccttgtacatagctcaagtccaag
tggatcaaggacctcaacctaaaaccagacatactgaaacctatagaata
ggaagtagggataatacttgaatacttgaacacagggcaaaacttcctga
agagaataccaatgacttatgctttaagagtaacaataaacaaatgggac
ctcagaaaattgaaaagcttctataaagcaagagacattatcaatagacc
aaaatggcaacccacagattgggaaaagatatttaccaacccttcatttg
atagagagttaatatccaaaatatacaaagaacacaagaaagcagacccc
agagaaacaaataatcctattaaaaagtggagtacacagaaacacactaa
tagagaatttctactatttagttaaatacaggaaaagacggttctgccca
agtcctgaatcttttaagcatggcaggttctcttgaatctaccatcttct
gtgaactttaattaggtcctctcaaaacaagggctgtactcaattactta
gaaagcccctcaggaacctggcagcggtggggcatgcctttaatcccagc
acttggaaggcagaggcaggcagatttctgagttcgaggccagcctggtc
tacaaagtgagttccaggacagccagggctacacagagaaaccctgtctc
aaaaaaacagaagaaagaaagaaagagagagagagagaaagagagagaga
gagagaaagagagagagagagaaagaaagagagggaaagagaaagagagg
gaaagagagagagacagagagaggagagagagagcaagccagcccctcag
ttcttatatgtgacaagaaaatattgtatatagagtattaataaactcta
tgtgcatcaaattaatggcaccagaatcatgttgttacaattataatgtg
aatatagtaatgatagtatgaaaatgggtctttgtgtataaatatgtggt
catacatca
gaattcactatttgctttttataacatttttcagaacttcaatatccttt
tcctctttgaatatttagttgtttaaatagaaagtaaaacacagggcttt
atattcatatatttggtttgtgtctataatcctgctattgtgaatgaagc
taatgcatacttagtgtatatgtcttcttatgcatttattttcagaattc
tagatataagattaatgagaatactgctgaataactgcatttttatttga
ggatccctttagagccggcagtatgatgttcaaacacagctatcatctta
agagagggctgagtaactaccatagattcaagaatgtcatatttacctga
gaatttcataattaagaatacgtacaattagagttttatacctcccttgc
agacttgtcttgattgcttttggttttattcttttttgaaatttgaaaat
actagttattttaagagccattcttaccactgtcttccctctagaacaag
agcagcttgtttgtagccaggaaatactctggtttttatatttgcttttc
aaatctctattcaccacccactgacttaccatcactatactccaagagat
tagcattgctctccaaaaataatgtaatcaggtatctccatgtctattta
tcattttttccatgattttcaaatgcccaattgacagcactagctaacta
tatttctttgaagggttatgttgtatctatttcctatctgtgaaatttgt
ggaaatatatctcgtagctctatgttaggctgccttagttgtacactcat
ggtcaagggaatattcctaattgccagtgtcctggaaagaaatcaattaa
ttcatcctaaaggatgacactttctgcattacttcatggacaaatgttac
ctacgattatttcttatttgaatatagtatccctgattgaagagtaaaag
cactgtttatgcaattgggaaacaaatgaaaatcacacacacactcatat
agtcccccctacacacacacatgtgcacagcataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_60423463_60423794
seq2: B6Ng01-266G13.b_631_881 (reverse)

seq1  CTCTCTCTCTCCTTCTCTTCCCTTTCTCTCTTTCTCTTCTTTCACTTTCT  50
      ||||||||||||            ||||||| |||||       || |||
seq2  CTCTCTCTCTCC------------TCTCTCTGTCTCT-------CTCTCT  31

seq1  TTTCTTCCTTCTTTTCTGTCTTTCTTTCTCTTTTTTCCTTCCTTCCTTCC  100
      || |               || ||||||||||                  
seq2  TTCC---------------CTCTCTTTCTCTT------------------  48

seq1  TTCCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCCTCTCTCTCT  150
      | ||| |||| |                         || ||||||||||
seq2  TCCCTCTCTTTC-------------------------TTTCTCTCTCTCT  73

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCT  200
      |||| ||||||||||||||||| ||||||||||||||| ||| |||||||
seq2  CTCTTTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTTTCTTTCTTTCT  123

seq1  CTCTCTTCCCACTAGATAGGGTTTCTCTGTGTAGTGCTAGCTGTCCTGGA  250
       ||| ||      ||| |||||||||||||||||  || |||||||||||
seq2  -TCTGTTTTTTTGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGA  172

seq1  ACTCCACTCTGTAGACCAGGCTGGCCTTAAACTCAGAGAAATCTGCCTGC  300
      ||| |||| ||||||||||||||||||  |||||  ||||||||||||||
seq2  ACT-CACTTTGTAGACCAGGCTGGCCTCGAACTC--AGAAATCTGCCTGC  219

seq1  CTCTTCCTCCCAAGTGCTGAGATTAAAGGCAT  332
      |||| ||| |||||||||| ||||||||||||
seq2  CTCTGCCTTCCAAGTGCTGGGATTAAAGGCAT  251

seq1: chr10_48130465_48131498
seq2: B6Ng01-266G13.g_66_1100

seq1  GAATTCACTATTTGCTTTTTATAACATTTTTCAGAACTTCAATATCCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATTTGCTTTTTATAACATTTTTCAGAACTTCAATATCCTTT  50

seq1  TCCTCTTTGAATATTTAGTTGTTTAAATAGAAAGTAAAACACAGGGCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTTGAATATTTAGTTGTTTAAATAGAAAGTAAAACACAGGGCTTT  100

seq1  ATATTCATATATTTGGTTTGTGTCTATAATCCTGCTATTGTGAATGAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCATATATTTGGTTTGTGTCTATAATCCTGCTATTGTGAATGAAGC  150

seq1  TAATGCATACTTAGTGTATATGTCTTCTTATGCATTTATTTTCAGAATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCATACTTAGTGTATATGTCTTCTTATGCATTTATTTTCAGAATTC  200

seq1  TAGATATAAGATTAATGAGAATACTGCTGAATAACTGCATTTTTATTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATATAAGATTAATGAGAATACTGCTGAATAACTGCATTTTTATTTGA  250

seq1  GGATCCCTTTAGAGCCGGCAGTATGATGTTCAAACACAGCTATCATCTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCCCTTTAGAGCCGGCAGTATGATGTTCAAACACAGCTATCATCTTA  300

seq1  AGAGAGGGCTGAGTAACTACCATAGATTCAAGAATGTCATATTTACCTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGGCTGAGTAACTACCATAGATTCAAGAATGTCATATTTACCTGA  350

seq1  GAATTTCATAATTAAGAATACGTACAATTAGAGTTTTATACCTCCCTTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTCATAATTAAGAATACGTACAATTAGAGTTTTATACCTCCCTTGC  400

seq1  AGACTTGTCTTGATTGCTTTTGGTTTTATTCTTTTTTGAAATTTGAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTGTCTTGATTGCTTTTGGTTTTATTCTTTTTTGAAATTTGAAAAT  450

seq1  ACTAGTTATTTTAAGAGCCATTCTTACCACTGTCTTCCCTCTAGAACAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTTATTTTAAGAGCCATTCTTACCACTGTCTTCCCTCTAGAACAAG  500

seq1  AGCAGCTTGTTTGTAGCCAGGAAATACTCTGGTTTTTATATTTGCTTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCTTGTTTGTAGCCAGGAAATACTCTGGTTTTTATATTTGCTTTTC  550

seq1  AAATCTCTATTCACCACCCACTGACTTACCATCACTATACTCCAAGAGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTCTATTCACCACCCACTGACTTACCATCACTATACTCCAAGAGAT  600

seq1  TAGCATTGCTCTCCAAAAATAATGTAATCAGGTATCTCCATGTCTATTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATTGCTCTCCAAAAATAATGTAATCAGGTATCTCCATGTCTATTTA  650

seq1  TCATTTTTTCCATGATTTTCAAATGCCCAATTGACAGCACTAGCTAACTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTTTCCATGATTTTCAAATGCCCAATTGACAGCACTAGCTAACTA  700

seq1  TATTTCTTTGAAGGGTTATGTTGTATCTATTTCCTATCTGTGAAATTTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTTTGAAGGGTTATGTTGTATCTATTTCCTATCTGTGAAATTTGT  750

seq1  GGAAATATATCTCGTAGCTCTATGTTAGGCTGCCTTAGTTGTACACTCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATATATCTCGTAGCTCTATGTTAGGCTGCCTTAGTTGTACACTCAT  800

seq1  GGTCAAGGGAATATTCCTAATTGCCAGTGTCCTGGAAAGAAATCAATTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAAGGGAATATTCCTAATTGCCAGTGTCCTGGAAAGAAATCAATTAA  850

seq1  TTCATCCTAAAGGATGACACTTTCTGCATTACTTCATGGACAAATGTTAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCCTAAAGGATGACACTTTCTGCATTACTTCATGGACAAATGTTAC  900

seq1  CTACGATTATTTCTTATTTGAATATAGTATCCCTGATTGAAGAGTAAAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACGATTATTTCTTATTTGAATATAGTATCCCTGATTGAAGAGTAAAAG  950

seq1  CACTGTTTATGCAATT-GGAAACAAATGAAAATCACACACACACTCATAT  999
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CACTGTTTATGCAATTGGGAAACAAATGAAAATCACACACACACTCATAT  1000

seq1  AGTCCCCCCTACACACACACATGTGCACAGCATAA  1034
      |||||||||||||||||||||||||||||||||||
seq2  AGTCCCCCCTACACACACACATGTGCACAGCATAA  1035