BAC Information

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BAC

Clone NameB6Ng01-267B03
Chromosome14 (Build37)
Map Location 110,930,611 - 110,931,749
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC640892
Downstream geneSlitrk6, EG668772, EG622052, LOC100043491, LOC100043494
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267B03.bB6Ng01-267B03.g
ACCGA070298GA070299
length1,1871,149
definitionB6Ng01-267B03.b B6Ng01-267B03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttatttatctctgtaccccatttttaaaagggttacttggttc
tctggattctaacttcttgagttctttgtatattggataaatagatgaat
atatatggaagagccctctatcagatttaggggtagtaaagatctttccc
caatttgttggttgccgttttgtccttttgacaatgtcctttgccttaca
gaagctttgcaattttatgaggttccatttgtctatttttgatcttagag
cttaaaacactagtgtttggttaaggaaattttcccctgtgcccatgtgt
tcaaagatctttcccacttttattaatttcaatggatctagttttatgtg
gaagtccttgatctacttggacttgagcttttttcaaggattgatatgca
ttcttctacatgctgaccaccagttgaatcagcaccatttgttgaaaaca
ctgtcttttttccactggatggttttagctccttttcaaaaggtcaagtg
atcatagttatgtgggttcatttctggatcttcaattctgttccattgat
ctacctgcctgtctctgtacccatactatacagtttttttatcactattg
ctctgtaatacaacttgaggtcagggatggtaattctcccagaagttctt
tttgttgttgttgttgttgttgagaatagtttttcactatcctggttttt
tgttattccaaatgaatttgtaaattgctctttctaactctatgaagaat
tgagttgaaattttgatgaagattgcattgaatttataagttgctttcag
caagatgaccatttttactatagtaatcctgccaatctatgagcatggga
gatctatccatctgctgagatctttttttaatttctttcttcagaggcat
gaagctctttgtcatacagatctttctcttgcttggatagagtcacacca
aagtgtttattatatttttactatgtgaggtgtcattcctaattttttct
cagcctctatcctttgatagagtaaagttactaatttgttgattatttga
tatcaggactttcctgaaggttgtttattcagttagggtctctgtgattt
tgggatcagtagtataccatctcatatcaactgaatacgcaattgactct
ctttcagtttcatccttggaccttcatttggttgtca
gaattcccaagggcagaggtgggtgggggtgtgtagcatatgctcagagg
agaggaggaaccaagatgggggaagaattttgagagaggctgatttggag
gagcaagtaagggagatataagcataataaataaattgatgatgatgatg
attatagtaataataataataaagaaagaaagcattggtgaaggaaaaca
gaaaaagagaaagttcttaaacactggaggcagagtgaacccatgagtgt
gaaacatcttgtgatccgtgtgacagcaagtcagcacacatccctaaaca
tcagcagcacatccgtagtggaactctgtttcaaatatgaaaaaacaaaa
caaaaacttttattgtataacgttcaagatataatcaaaaaagaacaatt
actcttctggctcagcaatagcctaccctaagtaaaatagtgacttgtgc
caacacgacaggagtctgacattctaggcaagtacagctttccagcccct
tgtacaaacaagttttaagttgttgactacatttataagcttcatctaac
actaaaagtacaggtttcttctctccattaggtgtaagtcataaaattac
aaaatttatcccttttgaattcaacacagttaaaaataaactagtatatg
tcaaatggaagttatgattttttttattggttatgttcctttttctgtgt
ttctctgaaatgaaccaggtttcctcagcaaatgcttaggacatatgcat
ccctttggattttaactttacaaagacatcactgaactgtgagacctaat
taaggtatattcaacttcagactgaccaataatttcttgtccttagcaca
gtactactatgagatttcattggtgtccagaattgggtgatagatatatg
ggaacacataatgaaaaggaattccagggacacttggggctatgtttgat
agattagttcacaattgtactactacatattacagcttggatagaattga
atacttcagagtttcctgtgtaatttattattcccagacctggacattca
ggtccagggttctgatctttattcacaattaggtaaaacaggtcttgtta
cacatatgtgtataaatgtgaaccaaatttttaaatatactgttccttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_110930611_110931749
seq2: B6Ng01-267B03.g_67_1215

seq1  GAATTCCCAAGGGCAGAGGTGGGTGGGGGTGTGTAGCATATGCTCAGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAAGGGCAGAGGTGGGTGGGGGTGTGTAGCATATGCTCAGAGG  50

seq1  AGAGGAGGAACCAAGATGGGGGAAGAATTTTGAGAGAGGCTGATTTGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAGGAACCAAGATGGGGGAAGAATTTTGAGAGAGGCTGATTTGGAG  100

seq1  GAGCAAGTAAGGGAGATATAAGCATAATAAATAAATTGATGATGATGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAGTAAGGGAGATATAAGCATAATAAATAAATTGATGATGATGATG  150

seq1  ATTATAGTAATAATAATAATAAAGAAAGAAAGCATTGGTGAAGGAAAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAGTAATAATAATAATAAAGAAAGAAAGCATTGGTGAAGGAAAACA  200

seq1  GAAAAAGAGAAAGTTCTTAAACACTGGAGGCAGAGTGAACCCATGAGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAGAGAAAGTTCTTAAACACTGGAGGCAGAGTGAACCCATGAGTGT  250

seq1  GAAACATCTTGTGATCCGTGTGACAGCAAGTCAGCACACATCCCTAAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACATCTTGTGATCCGTGTGACAGCAAGTCAGCACACATCCCTAAACA  300

seq1  TCAGCAGCACATCCGTAGTGGAACTCTGTTTCAAATATGAAAAAACAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAGCACATCCGTAGTGGAACTCTGTTTCAAATATGAAAAAACAAAA  350

seq1  CAAAAACTTTTATTGTATAACGTTCAAGATATAATCAAAAAAGAACAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAACTTTTATTGTATAACGTTCAAGATATAATCAAAAAAGAACAATT  400

seq1  ACTCTTCTGGCTCAGCAATAGCCTACCCTAAGTAAAATAGTGACTTGTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTCTGGCTCAGCAATAGCCTACCCTAAGTAAAATAGTGACTTGTGC  450

seq1  CAACACGACAGGAGTCTGACATTCTAGGCAAGTACAGCTTTCCAGCCCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACGACAGGAGTCTGACATTCTAGGCAAGTACAGCTTTCCAGCCCCT  500

seq1  TGTACAAACAAGTTTTAAGTTGTTGACTACATTTATAAGCTTCATCTAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACAAACAAGTTTTAAGTTGTTGACTACATTTATAAGCTTCATCTAAC  550

seq1  ACTAAAAGTACAGGTTTCTTCTCTCCATTAGGTGTAAGTCATAAAATTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAAGTACAGGTTTCTTCTCTCCATTAGGTGTAAGTCATAAAATTAC  600

seq1  AAAATTTATCCCTTTTGAATTCAACACAGTTAAAAATAAACTAGTATATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTATCCCTTTTGAATTCAACACAGTTAAAAATAAACTAGTATATG  650

seq1  TCAAATGGAAGTTATGATTTTTTTTATTGGTTATGTTCCTTTTTCTGTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATGGAAGTTATGATTTTTTTTATTGGTTATGTTCCTTTTTCTGTGT  700

seq1  TTCTCTGAAATGAACCAGGTTTCCTCAGCAAATGCTTAGGACATATGCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGAAATGAACCAGGTTTCCTCAGCAAATGCTTAGGACATATGCAT  750

seq1  CCCTTTGGATTTTAACTTTACAAAGACATCACTGAACTGTGAGACCTAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTGGATTTTAACTTTACAAAGACATCACTGAACTGTGAGACCTAAT  800

seq1  TAAGGTATATTCAACTTCAGACTGACCAATAATTTCTTGTCCTTAGCACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTATATTCAACTTCAGACTGACCAATAATTTCTTGTCCTTAGCACA  850

seq1  GTACTACTATGAGATTTCATTGGTGTCCAGAATT-GGTGATAGATATAT-  898
      |||||||||||||||||||||||||||||||||| |||||||||||||| 
seq2  GTACTACTATGAGATTTCATTGGTGTCCAGAATTGGGTGATAGATATATG  900

seq1  GGAACACATAATGAAAA-GAATTCCA-GGACACTT-GGGCTATG-TTGAT  944
      ||||||||||||||||| |||||||| |||||||| |||||||| |||||
seq2  GGAACACATAATGAAAAGGAATTCCAGGGACACTTGGGGCTATGTTTGAT  950

seq1  AGAATTAGTTCACAA-TGTACTACTACATATTACAGCTTGGATAGAATTG  993
      || |||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AG-ATTAGTTCACAATTGTACTACTACATATTACAGCTTGGATAGAATTG  999

seq1  ATAACTTCAGAGTTTCCTGTGTAAATTATTA-TCCCAGAACTGGACATTC  1042
      |  ||||||||||||||||||||| |||||| ||||||| ||||||||||
seq2  AATACTTCAGAGTTTCCTGTGTAATTTATTATTCCCAGACCTGGACATTC  1049

seq1  A-GTCCA-GGTTCTGAATCTTTAATTCACCATTAG--TAAACA-GTCTTG  1087
      | ||||| ||||||| |||||| |||||| |||||   ||||| ||||||
seq2  AGGTCCAGGGTTCTG-ATCTTT-ATTCACAATTAGGTAAAACAGGTCTTG  1097

seq1  -TACACATATGTGTATAAAATGTGA--CACAATTTTAAATAATACCTGTT  1134
       ||||||||||||||| ||||||||  || | |||||||| ||| |||||
seq2  TTACACATATGTGTAT-AAATGTGAACCAAATTTTTAAAT-ATA-CTGTT  1144

seq1  CCTTT  1139
      |||||
seq2  CCTTT  1149