BAC Information

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BAC

Clone NameB6Ng01-268L01
Chromosome14 (Build37)11 (Build37)
Map Location 73,937,516 - 73,938,57872,428,099 - 72,428,144
singlet/doubletsingletsinglet
Overlap geneNudt15
Upstream geneFndc3a, LOC100043721, LOC100043723, LOC668487, LOC668489, Cysltr2, LOC100043149, Rcbtb2, Rb1, P2ry5, Itm2b, LOC100043152, Med4
Downstream geneSucla2, LOC100043734, EG629578, LOC629583
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-268L01.bB6Ng01-268L01.g
ACCGA071481GA071482
length1,068345
definitionB6Ng01-268L01.b B6Ng01-268L01.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(73,937,516 - 73,938,578)(72,428,099 - 72,428,144)
sequence
gaattcatttggcctcataccagggaagtattcagctatacacagaagtt
gcccaaaaatgggatgattgtgagggacttggcagccgtgtttttgaaag
accagagataaaagggaaaagtgaggtcccacttagttccaggcaaaact
acaagagttatatttacccaactgccagtggtcactcccactactaagtg
gtcatgtgagtgcctctgttttgggagcaaactgaacgatgctcagttgg
aaagaaaacttggtttgcaaatgttgacattgttaccctactgtcagtac
ccatggggcggtgggatctgggggaatggagccagtaaatgagatagact
gaagtctcatgcaaaggcagcttttatttagagcatcagacaatctatac
tctgaggattaagaagagtcatatgagccagtggtggctcacacctttaa
tctcagcacttgggaggcagaggcagagacaggtggatttctgagttcga
ggccagcctggtctacagagtgatttccaggacagccagggctacacaga
gaaaccctgtctgagaagccacaatggccaaaacatgtttttccatagag
gaatataaacatttaattgaatagcagcagcaagcaatagtgaataatct
gaagtacactcgctcctatctgctacacctggaaggagcatgaaaacaca
ttcaagatatcccttccaactctcccctctctccttctccatctctctgt
ctctgtctccctcccccaactctttctgcctgtggattgttatgtagctt
tcagctattgctctagcaccatgcataccatcatgctccctccctgccgt
gaagagaatggactaagacttttataagagttgccttggtcatggcgtct
cttcacagcagtaaacagagactaaagacacccaacataggttgaaagaa
atagtgtaaagaatgtacctatcttatttatcatatgattcttaccccag
aatatcagcgttgtgattgcatgaggagaaacatgtaaggaacataggat
ggtgtcttcagcactaag
caggcaaccagttaatgctggaagagggagacttagttttccccagagat
gaaccccttaactggttctaatatcaagtggtcagacctggtcatgcatg
tacaagcaacacaaaactgaacagactcagaaggttgtatttatgtattc
atgcacatatatcaataataattagagaaaaagagaccagggatttgaag
gaagtcagggaggagacatggggaaggttagtggaaggaaaatgtaggag
ggagataatgtgattatattttaattaaattttaaaaaatacagtcagag
gctggagagatggctcagtggttaagagcactgactgttcttcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_73937516_73938578
seq2: B6Ng01-268L01.b_45_1112

seq1  GAATTCATTTGGCCTCATACCAGGGAAGTATTCAGCTATACACAGAAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTGGCCTCATACCAGGGAAGTATTCAGCTATACACAGAAGTT  50

seq1  GCCCAAAAATGGGATGATTGTGAGGGACTTGGCAGCCGTGTTTTTGAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAAAAATGGGATGATTGTGAGGGACTTGGCAGCCGTGTTTTTGAAAG  100

seq1  ACCAGAGATAAAAGGGAAAAGTGAGGTCCCACTTAGTTCCAGGCAAAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAGATAAAAGGGAAAAGTGAGGTCCCACTTAGTTCCAGGCAAAACT  150

seq1  ACAAGAGTTATATTTACCCAACTGCCAGTGGTCACTCCCACTACTAAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAGTTATATTTACCCAACTGCCAGTGGTCACTCCCACTACTAAGTG  200

seq1  GTCATGTGAGTGCCTCTGTTTTGGGAGCAAACTGAACGATGCTCAGTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGTGAGTGCCTCTGTTTTGGGAGCAAACTGAACGATGCTCAGTTGG  250

seq1  AAAGAAAACTTGGTTTGCAAATGTTGACATTGTTACCCTACTGTCAGTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAACTTGGTTTGCAAATGTTGACATTGTTACCCTACTGTCAGTAC  300

seq1  CCATGGGGCGGTGGGATCTGGGGGAATGGAGCCAGTAAATGAGATAGACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGGGCGGTGGGATCTGGGGGAATGGAGCCAGTAAATGAGATAGACT  350

seq1  GAAGTCTCATGCAAAGGCAGCTTTTATTTAGAGCATCAGACAATCTATAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCTCATGCAAAGGCAGCTTTTATTTAGAGCATCAGACAATCTATAC  400

seq1  TCTGAGGATTAAGAAGAGTCATATGAGCCAGTGGTGGCTCACACCTTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGGATTAAGAAGAGTCATATGAGCCAGTGGTGGCTCACACCTTTAA  450

seq1  TCTCAGCACTTGGGAGGCAGAGGCAGAGACAGGTGGATTTCTGAGTTCGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGCACTTGGGAGGCAGAGGCAGAGACAGGTGGATTTCTGAGTTCGA  500

seq1  GGCCAGCCTGGTCTACAGAGTGATTTCCAGGACAGCCAGGGCTACACAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGCCTGGTCTACAGAGTGATTTCCAGGACAGCCAGGGCTACACAGA  550

seq1  GAAACCCTGTCTGAGAAGCCACAATGGCCAAAACATGTTTTTCCATAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCCTGTCTGAGAAGCCACAATGGCCAAAACATGTTTTTCCATAGAG  600

seq1  GAATATAAACATTTAATTGAATAGCAGCAGCAAGCAATAGTGAATAATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATAAACATTTAATTGAATAGCAGCAGCAAGCAATAGTGAATAATCT  650

seq1  GAAGTACACTCGCTCCTATCTGCTACACCTGGAAGGAGCATGAAAACACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTACACTCGCTCCTATCTGCTACACCTGGAAGGAGCATGAAAACACA  700

seq1  TTCAAGATATCCCTTCCAACTCTCCCCTCTCTCCTTCTCCATCTCTCTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGATATCCCTTCCAACTCTCCCCTCTCTCCTTCTCCATCTCTCTGT  750

seq1  CTCTGTCTCCCTCCCCCAACTCTTTCTGCCTGTGGATTGTTATGTAGCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCTCCCTCCCCCAACTCTTTCTGCCTGTGGATTGTTATGTAGCTT  800

seq1  TCAGCTATTGCTCTAGCACCATGCATACCATCATGCTCCCTCCCTGCCGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTATTGCTCTAGCACCATGCATACCATCATGCTCCCTCCCTGCCGT  850

seq1  GAAGAGAATGGACTAAGAC-TTTATAAGAGTTGCCTTGGTCATGGCGTCT  899
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GAAGAGAATGGACTAAGACTTTTATAAGAGTTGCCTTGGTCATGGCGTCT  900

seq1  CTTCACAGCAGTAAACAGAGACT-AAGACACCCAACATAGGTTGAAAGAA  948
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CTTCACAGCAGTAAACAGAGACTAAAGACACCCAACATAGGTTGAAAGAA  950

seq1  ATAGTGTAAAGAATGTACCTATCTTATTTATCATATGATTCTTACCCCAG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGTAAAGAATGTACCTATCTTATTTATCATATGATTCTTACCCCAG  1000

seq1  AATATCAGCGTTGTGATTGCATGAGGAG-AACATGT-AGGAACATAGGAT  1046
      |||||||||||||||||||||||||||| ||||||| |||||||||||||
seq2  AATATCAGCGTTGTGATTGCATGAGGAGAAACATGTAAGGAACATAGGAT  1050

seq1  GGTGTC-TCAGCACTAGG  1063
      |||||| ||||||||| |
seq2  GGTGTCTTCAGCACTAAG  1068

seq1: chr11_72428099_72428144
seq2: B6Ng01-268L01.g_369_414 (reverse)

seq1  TGGAAGAGCAGTCAGTGCTCTTACCCACTGAGCCATCTCACCAGCC  46
      ||||||| ||||||||||||||| ||||||||||||||| ||||||
seq2  TGGAAGAACAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCC  46