BAC Information

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BAC

Clone NameB6Ng01-268O23
Chromosome14 (Build37)
Map Location 50,275,588 - 50,412,855
singlet/doubletdoublet
Overlap gene3632451O06Rik
Upstream geneOtx2, LOC100041864, LOC666972, Exoc5, 4932432K03Rik, LOC218997, Nat12, 1700011H14Rik, Slc35f4
Downstream geneLOC667006, Olfr722, Olfr723, Olfr724, LOC100041975, Olfr725, LOC100042882, Olfr726, Olfr727, Olfr728, Olfr729, Olfr730, Olfr731, Olfr732, Olfr733, Olfr734, Olfr735, Tlr11, Olfr736, Olfr737-ps1, Olfr738, Olfr739, Olfr740, Olfr741, GA_x5J8B7U07Q4-325-757, GA_x5J8B7TYL6J-3-280, Olfr742, Olfr743-ps1, Olfr744, Olfr745, Olfr746, Olfr747, Olfr748, Olfr749, Ttc5, Gm288
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-268O23.bB6Ng01-268O23.g
ACCGA071666GA071667
length8841,147
definitionB6Ng01-268O23.b B6Ng01-268O23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(50,411,982 - 50,412,855)(50,275,588 - 50,276,741)
sequence
gaattcaaaacccaggatcaaaatctttgaaataaccaaagcaatatttt
gtctttgatattctttctgaagacctgaaacataaaatagacataaaaca
taaaacatccacctcccagaatcagaacaaagcatttctactctaatttg
tttacaaataaaataagggtgaaggggagacttctttcaaatcagaatga
ttggaagcatgactcatcctgagaaaatcatttgctttgggactgctcta
atatatgaggcatccacacaaaaggacaaatgaatttgtccccagtaaag
tcccagtgaaggaaaatggggtggccatgtgacaaactttcctttctctc
tcatttggcttttagacattttctgtgagtagatttcagacagtgacatg
ttttcttttccttctcttgcaaaaggcactttaaggcactgattcctgca
gcttctgctcagctgtgactgttccagcaggccctctgacattttacttg
catcaggttctgttcaattcacaaacaaacaaaacctcagcctacttctt
tgtcgtgctcccctaaatttttattttcgttgtattttccctgacttcct
tttcttgtgtgctactgagttcctagattaaatgtgctgctgttaaatgt
gtgcatattctctatgtgtacatttgttccttgtttcaaagaggaatggt
tgagcactttagtccaatcctgagtctcagggtcttttaatttcagtgag
ccaccatgttgaaaggcagccttttaggagtataacagaatcttgcaaaa
tataatgggattattcattcacacactttttattaggtcaattcttttgc
ccaaagcacaaatatccagcattggccttcatct
gaattcagtgagttactgaaaaaaaaaaaaagacatgactatgggaggga
gttttggggtagaagatcctgagagaaagaaaggggtgaatgtaagcaaa
gtgcattgtgtatatgcttgagatgatcacatacttttaaaaattaaaat
aaatgaagttgatagtaaagatgaccattttgtgacaatattttttttct
acttttcccagagccctaagaacacttgatatatgtctctgtggcagaaa
cagttttctccacttccaaccaattattggagttagtttggtgccaaata
tgccttctgatggaagttggaagatgtttctgctctttaggaattaaaag
ttttaggctcaatttttaagaccctgtgcatacttgccctggcaccgttc
tcacttccacatagaaggatacaggagcaaaaatctcacatgttgctttt
ctatgatccatgatccctcactctggctgtgtatctagagccagttctgc
tacagtggcagttagaagactagagacagtagtgacctacagtgaatggg
gtagagatgttggatgaaatcaggaggttcagacgtgagactggtagact
agaaatagcataagatatctgaaaacctatccaatgaacatttcataggg
agacctagagcaaactccagtgatctaggctatgatgaatacactgtgta
gataaatacactattaatgaatatttgaactgcttcagatccccatcatc
tgaaagctggtgttgagaatgaaggactctgccatagagttaggagctat
agaacaaaagaaatggagaaaaaggcaaatgacggcccatagttgtcaaa
ggcaaggtgaatgtaattacagtgttcagcaagacttgaagtggaaaaca
ggatgtctagaatatggaggcccacaggagccagtactacagggagtgaa
aacagtgcaagcctacaaagcgtctttgagttttaggaccagtgaaatga
aatagtggagacagaagccttgtgagtttacaagtgataggatgatacca
tttccaattggaggcagtgtactgctaggtttgtgttcaacttggacaca
gcctgtagttatcacaagaacagacttcagttggccattgcctccat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_50411982_50412855
seq2: B6Ng01-268O23.b_49_932 (reverse)

seq1  AGATG-AGGCCAATGCTGG-TATTTGTGCTCTGGGCAAAAGAATTGACCT  48
      ||||| ||||||||||||| |||||||||| |||||||||||||||||||
seq2  AGATGAAGGCCAATGCTGGATATTTGTGCTTTGGGCAAAAGAATTGACCT  50

seq1  A--TAAAAGTGTGTGAATGAATAAT-CCATTATATTTTGCAAGATTCTGT  95
      |   ||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AATAAAAAGTGTGTGAATGAATAATCCCATTATATTTTGCAAGATTCTGT  100

seq1  TATACTCCT-AAAGGCTGCC-TTCAACATGGTGGCTCACTGAAATT-AAA  142
      ||||||||| |||||||||| ||||||||||||||||||||||||| |||
seq2  TATACTCCTAAAAGGCTGCCTTTCAACATGGTGGCTCACTGAAATTAAAA  150

seq1  GACCCTGAGACTCAGGATTGGACTAAAGTGCTCAACCATTCCTCTTTGAA  192
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTGAGACTCAGGATTGGACTAAAGTGCTCAACCATTCCTCTTTGAA  200

seq1  ACAAGGAAC-AATGTACACATAGAGAATATGCACACATTTAACAGCAGCA  241
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGAACAAATGTACACATAGAGAATATGCACACATTTAACAGCAGCA  250

seq1  CATTTAATCTAGGAACTCAGTAGCACACAAGAAAAGGAAGTCAGGG-AAA  290
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CATTTAATCTAGGAACTCAGTAGCACACAAGAAAAGGAAGTCAGGGAAAA  300

seq1  TACAACGAAAATAAAAATTTAGGGGAGCACGACAAAGAAGTAGGCTGAGG  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACGAAAATAAAAATTTAGGGGAGCACGACAAAGAAGTAGGCTGAGG  350

seq1  TTTTGTTTGTTTGTGAATTGAACAGAACCTGATGCAAGTAAAATGTCAGA  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTGTTTGTGAATTGAACAGAACCTGATGCAAGTAAAATGTCAGA  400

seq1  GGGCCTGCTGGAACAGTCACAGCTGAGCAGAAGCTGCAGGAATCAGTGCC  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTGCTGGAACAGTCACAGCTGAGCAGAAGCTGCAGGAATCAGTGCC  450

seq1  TTAAAGTGCCTTTTGCAAGAGAAGGAAAAGAAAACATGTCACTGTCTGAA  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTGCCTTTTGCAAGAGAAGGAAAAGAAAACATGTCACTGTCTGAA  500

seq1  ATCTACTCACAGAAAATGTCTAAAAGCCAAATGAGAGAGAAAGGAAAGTT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACTCACAGAAAATGTCTAAAAGCCAAATGAGAGAGAAAGGAAAGTT  550

seq1  TGTCACATGGCCACCCCATTTTCCTTCACTGGGACTTTACTGGGGACAAA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACATGGCCACCCCATTTTCCTTCACTGGGACTTTACTGGGGACAAA  600

seq1  TTCATTTGTCCTTTTGTGTGGATGCCTCATATATTAGAGCAGTCCCAAAG  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTGTCCTTTTGTGTGGATGCCTCATATATTAGAGCAGTCCCAAAG  650

seq1  CAAATGATTTTCTCAGGATGAGTCATGCTTCCAATCATTCTGATTTGAAA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGATTTTCTCAGGATGAGTCATGCTTCCAATCATTCTGATTTGAAA  700

seq1  GAAGTCTCCCCTTCACCCTTATTTTATTTGTAAACAAATTAGAGTAGAAA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCTCCCCTTCACCCTTATTTTATTTGTAAACAAATTAGAGTAGAAA  750

seq1  TGCTTTGTTCTGATTCTGGGAGGTGGATGTTTTATGTTTTATGTCTATTT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTGTTCTGATTCTGGGAGGTGGATGTTTTATGTTTTATGTCTATTT  800

seq1  TATGTTTCAGGTCTTCAGAAAGAATATCAAAGACAAAATATTGCTTTGGT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTTCAGGTCTTCAGAAAGAATATCAAAGACAAAATATTGCTTTGGT  850

seq1  TATTTCAAAGATTTTGATCCTGGGTTTTGAATTC  874
      ||||||||||||||||||||||||||||||||||
seq2  TATTTCAAAGATTTTGATCCTGGGTTTTGAATTC  884

seq1: chr14_50275588_50276741
seq2: B6Ng01-268O23.g_66_1212

seq1  GAATTCAGTGAGTTACTGAAAAAAAAAAAAAGACATGACTATGGGAGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGAGTTACTGAAAAAAAAAAAAAGACATGACTATGGGAGGGA  50

seq1  GTTTTGGGGTAGAAGATCCTGAGAGAAAGAAAGGGGTGAATGTAAGCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGGGGTAGAAGATCCTGAGAGAAAGAAAGGGGTGAATGTAAGCAAA  100

seq1  GTGCATTGTGTATATGCTTGAGATGATCACATACTTTTAAAAATTAAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATTGTGTATATGCTTGAGATGATCACATACTTTTAAAAATTAAAAT  150

seq1  AAATGAAGTTGATAGTAAAGATGACCATTTTGTGACAATATTTTTTTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAAGTTGATAGTAAAGATGACCATTTTGTGACAATATTTTTTTTCT  200

seq1  ACTTTTCCCAGAGCCCTAAGAACACTTGATATATGTCTCTGTGGCAGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTCCCAGAGCCCTAAGAACACTTGATATATGTCTCTGTGGCAGAAA  250

seq1  CAGTTTTCTCCACTTCCAACCAATTATTGGAGTTAGTTTGGTGCCAAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTTCTCCACTTCCAACCAATTATTGGAGTTAGTTTGGTGCCAAATA  300

seq1  TGCCTTCTGATGGAAGTTGGAAGATGTTTCTGCTCTTTAGGAATTAAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTCTGATGGAAGTTGGAAGATGTTTCTGCTCTTTAGGAATTAAAAG  350

seq1  TTTTAGGCTCAATTTTTAAGACCCTGTGCATACTTGCCCTGGCACCGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGGCTCAATTTTTAAGACCCTGTGCATACTTGCCCTGGCACCGTTC  400

seq1  TCACTTCCACATAGAAGGATACAGGAGCAAAAATCTCACATGTTGCTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTCCACATAGAAGGATACAGGAGCAAAAATCTCACATGTTGCTTTT  450

seq1  CTATGATCCATGATCCCTCACTCTGGCTGTGTATCTAGAGCCAGTTCTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGATCCATGATCCCTCACTCTGGCTGTGTATCTAGAGCCAGTTCTGC  500

seq1  TACAGTGGCAGTTAGAAGACTAGAGACAGTAGTGACCTACAGTGAATGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTGGCAGTTAGAAGACTAGAGACAGTAGTGACCTACAGTGAATGGG  550

seq1  GTAGAGATGTTGGATGAAATCAGGAGGTTCAGACGTGAGACTGGTAGACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGATGTTGGATGAAATCAGGAGGTTCAGACGTGAGACTGGTAGACT  600

seq1  AGAAATAGCATAAGATATCTGAAAACCTATCCAATGAACATTTCATAGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATAGCATAAGATATCTGAAAACCTATCCAATGAACATTTCATAGGG  650

seq1  AGACCTAGAGCAAACTCCAGTGATCTAGGCTATGATGAATACACTGTGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTAGAGCAAACTCCAGTGATCTAGGCTATGATGAATACACTGTGTA  700

seq1  GATAAATACACTATTAATGAATATTTGAACTGCTTCAGATCCCCATCATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAATACACTATTAATGAATATTTGAACTGCTTCAGATCCCCATCATC  750

seq1  TGAAAGCTGGTGTTGAGAATGAAGGACTCTGCCATAGAGTTAGGAGCTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGCTGGTGTTGAGAATGAAGGACTCTGCCATAGAGTTAGGAGCTAT  800

seq1  AGAACAAAAGAAATGGAGAAAAAGGCAAATGACGGCCCATAGTTGTCAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAAAAGAAATGGAGAAAAAGGCAAATGACGGCCCATAGTTGTCAAA  850

seq1  GGCAAGGTGAATGTAATTACAGTGTTCAGCAAGACTTGAAGTGGAAAACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGGTGAATGTAATTACAGTGTTCAGCAAGACTTGAAGTGGAAAACA  900

seq1  GGATGTCTAGAATAATGGAGGCCCACAGGAGCCAGTACTACAGGGAGTGA  950
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GGATGTCTAGAAT-ATGGAGGCCCACAGGAGCCAGTACTACAGGGAGTGA  949

seq1  AAACAGTGCAAAGCCTACAAAGCGTTCTTTGAGTTTTAGGACCAGTGAAA  1000
      ||||||||| |||||||||||||| |||||||||||||||||||||||||
seq2  AAACAGTGC-AAGCCTACAAAGCG-TCTTTGAGTTTTAGGACCAGTGAAA  997

seq1  TGAAATAGTGGGAGGACAGAAGCCCTTGTGAG-TTAC-AGTGATAGAATG  1048
      |||||||||||   |||||||| ||||||||| |||| |||||||| |||
seq2  TGAAATAGTGG--AGACAGAAG-CCTTGTGAGTTTACAAGTGATAGGATG  1044

seq1  ATACCATTTCCAAATTGGAGGCAAGTGTACTGGCTAGTTTTGTG-TCAAC  1097
      ||||||||||| |||||||||| |||||||| ||||| |||||| |||||
seq2  ATACCATTTCC-AATTGGAGGC-AGTGTACT-GCTAGGTTTGTGTTCAAC  1091

seq1  TT-GACACAG-CTGTAGTTATCACAGAGACAGGAGCTTCAGTTGGGGAAA  1145
      || ||||||| ||||||||||||||   ||||   |||||||| ||  | 
seq2  TTGGACACAGCCTGTAGTTATCACAAGAACAG--ACTTCAGTT-GGCCAT  1138

seq1  TGCCTCCAT  1154
      |||||||||
seq2  TGCCTCCAT  1147