BAC Information

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BAC

Clone NameB6Ng01-269N01
Chromosome14 (Build37)
Map Location 70,827,065 - 70,972,547
singlet/doubletdoublet
Overlap genePiwil2, Polr3d, Phyhip, Bmp1, Sftpc, Lgi3, Reep4, Hr
Upstream geneSlc25a37, D930020E02Rik, Entpd4, Loxl2, R3hcc1, Chmp7, Tnfrsf10b, Rhobtb2, LOC100043701, 1700081D17Rik, LOC668397, Egr3, Bin3, 2610301G19Rik, 9930012K11Rik, Pdlim2, Sorbs3, Ppp3cc, LOC100043115, Slc39a14, EG668450
Downstream geneNudt18, Rai16, Epb4.9, Fgf17, Npm2, Xpo7, LOC668443, Dok2, Gfra2, LOC100043132
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-269N01.bB6Ng01-269N01.g
ACCGA072313GA072314
length722185
definitionB6Ng01-269N01.b B6Ng01-269N01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,827,065 - 70,827,786)(70,972,357 - 70,972,547)
sequence
gaattctttttttttaagatatatttatttattatatgtaaatacactgt
agctgtcttcagacaccccagaagagggtgtcagatctcattacagatgg
ttgtgagccaccatgtggttgctgggatttgaatttcagacattcgaaag
agcagtcagtgctcttaggtgctgatccatctctccagtttttttcttta
gaagcaggccagaatctcgctatggagccctacctggccctgaatgcttg
acaatcctcctgcctcaggctcccaagttctgggaaaacaggcatgtacc
accatacctgtcttatttttgagaaagcatcttgctgcatagcacaggca
ggccttgaacttgccatcttcctgtgtgctggaattacagaaataagctc
ctgtgtgccatgaaggctccaatttgagctaagaacctcccactagccaa
agcacctttagctgctctacctaaatgacctctcagggaactgtccatca
actaaccacctagtgtcaaaaggaacaattttttacatatagggatgact
tctgttgtagttaatacctccataccacaaaattattctgtcaacaaata
cgtttgggttttagtttttcttctatatcagttttttttctctgtcatct
ataactgcattcaacttattggatttagttgcttttctgaatcttttcca
gttttttattggggggggggtg
tgtggctcccggtccagtagacctacagagtcagaagggctttgtgtgga
tgttggtgtgagctggggtgagggtggggtgcgggggatcatgataaagc
atctaggggaagtgttgttttttccaatttatcccaagtttttcctatgt
attatgttttcccttgcggtggagtgcaggggtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_70827065_70827786
seq2: B6Ng01-269N01.b_49_770

seq1  GAATTCTTTTTTTTTAAGATATATTTATTTATTATATGTAAATACACTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTTTTTAAGATATATTTATTTATTATATGTAAATACACTGT  50

seq1  AGCTGTCTTCAGACACCCCAGAAGAGGGTGTCAGATCTCATTACAGATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTCTTCAGACACCCCAGAAGAGGGTGTCAGATCTCATTACAGATGG  100

seq1  TTGTGAGCCACCATGTGGTTGCTGGGATTTGAATTTCAGACATTCGAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAGCCACCATGTGGTTGCTGGGATTTGAATTTCAGACATTCGAAAG  150

seq1  AGCAGTCAGTGCTCTTAGGTGCTGATCCATCTCTCCAGTTTTTTTCTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTCAGTGCTCTTAGGTGCTGATCCATCTCTCCAGTTTTTTTCTTTA  200

seq1  GAAGCAGGCCAGAATCTCGCTATGGAGCCCTACCTGGCCCTGAATGCTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAGGCCAGAATCTCGCTATGGAGCCCTACCTGGCCCTGAATGCTTG  250

seq1  ACAATCCTCCTGCCTCAGGCTCCCAAGTTCTGGGAAAACAGGCATGTACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCCTCCTGCCTCAGGCTCCCAAGTTCTGGGAAAACAGGCATGTACC  300

seq1  ACCATACCTGTCTTATTTTTGAGAAAGCATCTTGCTGCATAGCACAGGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATACCTGTCTTATTTTTGAGAAAGCATCTTGCTGCATAGCACAGGCA  350

seq1  GGCCTTGAACTTGCCATCTTCCTGTGTGCTGGAATTACAGAAATAAGCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTGAACTTGCCATCTTCCTGTGTGCTGGAATTACAGAAATAAGCTC  400

seq1  CTGTGTGCCATGAAGGCTCCAATTTGAGCTAAGAACCTCCCACTAGCCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTGCCATGAAGGCTCCAATTTGAGCTAAGAACCTCCCACTAGCCAA  450

seq1  AGCACCTTTAGCTGCTCTACCTAAATGACCTCTCAGGGAACTGTCCATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCTTTAGCTGCTCTACCTAAATGACCTCTCAGGGAACTGTCCATCA  500

seq1  ACTAACCACCTAGTGTCAAAAGGAACAATTTTTTACATATAGGGATGACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACCACCTAGTGTCAAAAGGAACAATTTTTTACATATAGGGATGACT  550

seq1  TCTGTTGTAGTTAATACCTCCATACCACAAAATTATTCTGTCAACAAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTGTAGTTAATACCTCCATACCACAAAATTATTCTGTCAACAAATA  600

seq1  CGTTTGGGTTTTAGTTTTTCTTCTATATCAGTTTTTTTTCTCTGTCATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTGGGTTTTAGTTTTTCTTCTATATCAGTTTTTTTTCTCTGTCATCT  650

seq1  ATAACTGCATTCAACTTATTGGATTTAGTTGCTTTTCTGAATCTTTTCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTGCATTCAACTTATTGGATTTAGTTGCTTTTCTGAATCTTTTCCA  700

seq1  GTTTTTTATTGGGGGGGGGGTG  722
      ||||||||||||||||||||||
seq2  GTTTTTTATTGGGGGGGGGGTG  722

seq1: chr14_70972357_70972547
seq2: B6Ng01-269N01.g_70_254 (reverse)

seq1  TAACCCCTGCACTCCACCCCAGGGGATGAACATCCTTCCTTGGGGAAGCT  50
      | |||||||||||||||| || ||||  |||||  | | | ||  || ||
seq2  TGACCCCTGCACTCCACCGCAAGGGA-AAACATAATACATAGGAAAAACT  49

seq1  TGGGATTGTTTTGGTTTAAGCAACACTTCCCCTTGCTGCTTTATCCTGTG  100
      ||||| |   ||||   || ||||||||||||| | |||||||||   ||
seq2  TGGGA-TAAATTGGAAAAAACAACACTTCCCCTAGATGCTTTATC--ATG  96

seq1  TTGCCCCTGGCACCCCACCCTCACCCCAGCTCACACCAACATCCACACAA  150
       | ||||  |||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCC--GCACCCCACCCTCACCCCAGCTCACACCAACATCCACACAA  144

seq1  AGCCCTTCTGACTCTGTAGGTCTACTGGACCGGGAGCCACA  191
      |||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTTCTGACTCTGTAGGTCTACTGGACCGGGAGCCACA  185