BAC Information

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BAC

Clone NameB6Ng01-270G03
Chromosome14 (Build37)
Map Location 25,733,250 - 25,734,382
singlet/doubletsinglet
Overlap genenone
Upstream geneKcnma1, LOC620499, Dlg5, LOC100039335, E330034G19Rik, LOC669325, Polr3a, Rps24, LOC669315
Downstream geneLOC100039411, Zmiz1, I920194n01, LOC100039007, 4931406H21Rik, Ppif, 2310047A01Rik, Anxa11, Plac9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-270G03.bB6Ng01-270G03.g
ACCGA072737GA072738
length3391,133
definitionB6Ng01-270G03.b B6Ng01-270G03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tttgttcagttctgagccccattttttaatggggttatttgattttctga
agtccaccttcttgagttctttatatatgttggatattagtcccctatct
gatttaggataggtaaagatcctttcccaatctgttggtggtctttttgt
cttattgacggtgtcttttgccttgcagaaactttggagtttcattaggt
cccatttgtcaattctcgatcttacagcacaagccattgctgttctgttc
aggagaggcccattggacatgcaaactttatatgccccagtacagggtaa
cgccagggccaaaaagggggagtgggtgggtaggggagt
gaattcatactcactcctatgtctgtctatttaaataacaatgtgatcaa
aataatgttagttgacgctggggatctctgatagtttggttccctttaaa
tgcgtatgtctggggcagcaagatggctcagcaggtaagtgactgctgct
cggtcccgatgatctgagttaaatctctgtaacccacgtttaaaaaagaa
tcattgtggtatggtggtatacgtctgtaatcgcaacactcctactgtgg
aatgggagctaggggagaagcacctagaagcttatgagtcgggtaacctg
gaaaagaagcacagcgggaacaacaaggaagaatccgcttcaataaagac
ggaggagaggctcccagagtttctctctggcctctacgcacactttccat
ggcataggagcaccctggtgttgcagctaccggcactcagatgcacatat
acctgcacaagaataactcaatgaacacttcgaatgcatctagtaatgaa
cttgaagaatcgctgagactgttctgtaacacacagctaaatgcacacat
cactgacttttaaaagttctgggtagaactggcactgcacagagaattat
gggaaagggtgtaatggtataagtctcatgagaatttagatcttttctaa
agtagaagctagtgggtagccatctcggatggctttgaatttcaaactac
ccacatccttttcttttttcctgctgatccttggtgtcacagcctaggtg
ggtatgagtagctgctgcatacacagatagatgctcagaacctgaatcct
gtatgtgacagacacggctgggaaagtccccagcatctgccagagtgata
gctccatgcctcctcagaccccagacccagaggctcagcgctgtgcaccc
ctgggctgtactgtggcaggcactgttactactgtaggtacttcctttat
cccatctgtccctagatcaaagcagagactagaaagaccaactgacttat
atggggtccataactgatgatggtgtgttggcatgggctcaaatacctgc
agagcctcagtttcattctacttgatcctgtcctctgtgcctgcagttca
ttgagacagggttgatgctgaatcccaacacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_25733250_25734382
seq2: B6Ng01-270G03.g_63_1195 (reverse)

seq1  GTGTGTTTGGGATCAGCAAC-ACCCTGTCTC-ATG-ACTGCAGCCACAGA  47
      ||||||| ||  |||||| | |||||||||| ||| ||||||| ||||||
seq2  GTGTGTTGGGATTCAGCATCAACCCTGTCTCAATGAACTGCAGGCACAGA  50

seq1  GGACAGGAACCAGTAGGATGAACTGGAGGCTCTGCAGGTATTTGAGCCCA  97
      |||||||| | ||||| |||||   |||||||||||||||||||||||||
seq2  GGACAGGATCAAGTAGAATGAAACTGAGGCTCTGCAGGTATTTGAGCCCA  100

seq1  TGCCCAACACACCATCATTCAGTTATGGACCCCATATAAGTCAGTTGGTC  147
      || |||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TG-CCAACACACCATCA-TCAGTTATGGACCCCATATAAGTCAGTTGGTC  148

seq1  TTTCCTAGTCTCTGCTTTGATCTAGGGACAGATGGGATAAAGGAAGTACC  197
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTT-CTAGTCTCTGCTTTGATCTAGGGACAGATGGGATAAAGGAAGTACC  197

seq1  TACAGTAGTAACAGTGCCTGCCACAGTACAGCCCAGGGGTGCACAGCGCT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTAGTAACAGTGCCTGCCACAGTACAGCCCAGGGGTGCACAGCGCT  247

seq1  GAGCCTCTGGGTCTGGGGTCTGAGGAGGCATGGAGCTATCACTCTGGCAG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTCTGGGTCTGGGGTCTGAGGAGGCATGGAGCTATCACTCTGGCAG  297

seq1  ATGCTGGGGACTTTCCCAGCCGTGTCTGTCACATACAGGATTCAGGTTCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGGGGACTTTCCCAGCCGTGTCTGTCACATACAGGATTCAGGTTCT  347

seq1  GAGCATCTATCTGTGTATGCAGCAGCTACTCATACCCACCTAGGCTGTGA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATCTATCTGTGTATGCAGCAGCTACTCATACCCACCTAGGCTGTGA  397

seq1  CACCAAGGATCAGCAGGAAAAAAGAAAAGGATGTGGGTAGTTTGAAATTC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAGGATCAGCAGGAAAAAAGAAAAGGATGTGGGTAGTTTGAAATTC  447

seq1  AAAGCCATCCGAGATGGCTACCCACTAGCTTCTACTTTAGAAAAGATCTA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCATCCGAGATGGCTACCCACTAGCTTCTACTTTAGAAAAGATCTA  497

seq1  AATTCTCATGAGACTTATACCATTACACCCTTTCCCATAATTCTCTGTGC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTCATGAGACTTATACCATTACACCCTTTCCCATAATTCTCTGTGC  547

seq1  AGTGCCAGTTCTACCCAGAACTTTTAAAAGTCAGTGATGTGTGCATTTAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCAGTTCTACCCAGAACTTTTAAAAGTCAGTGATGTGTGCATTTAG  597

seq1  CTGTGTGTTACAGAACAGTCTCAGCGATTCTTCAAGTTCATTACTAGATG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTGTTACAGAACAGTCTCAGCGATTCTTCAAGTTCATTACTAGATG  647

seq1  CATTCGAAGTGTTCATTGAGTTATTCTTGTGCAGGTATATGTGCATCTGA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCGAAGTGTTCATTGAGTTATTCTTGTGCAGGTATATGTGCATCTGA  697

seq1  GTGCCGGTAGCTGCAACACCAGGGTGCTCCTATGCCATGGAAAGTGTGCG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCGGTAGCTGCAACACCAGGGTGCTCCTATGCCATGGAAAGTGTGCG  747

seq1  TAGAGGCCAGAGAGAAACTCTGGGAGCCTCTCCTCCGTCTTTATTGAAGC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGCCAGAGAGAAACTCTGGGAGCCTCTCCTCCGTCTTTATTGAAGC  797

seq1  GGATTCTTCCTTGTTGTTCCCGCTGTGCTTCTTTTCCAGGTTACCCGACT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCTTCCTTGTTGTTCCCGCTGTGCTTCTTTTCCAGGTTACCCGACT  847

seq1  CATAAGCTTCTAGGTGCTTCTCCCCTAGCTCCCATTCCACAGTAGGAGTG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGCTTCTAGGTGCTTCTCCCCTAGCTCCCATTCCACAGTAGGAGTG  897

seq1  TTGCGATTACAGACGTATACCACCATACCACAATGATTCTTTTTTAAACG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCGATTACAGACGTATACCACCATACCACAATGATTCTTTTTTAAACG  947

seq1  TGGGTTACAGAGATTTAACTCAGATCATCGGGACCGAGCAGCAGTCACTT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTACAGAGATTTAACTCAGATCATCGGGACCGAGCAGCAGTCACTT  997

seq1  ACCTGCTGAGCCATCTTGCTGCCCCAGACATACGCATTTAAAGGGAACCA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCTGAGCCATCTTGCTGCCCCAGACATACGCATTTAAAGGGAACCA  1047

seq1  AACTATCAGAGATCCCCAGCGTCAACTAACATTATTTTGATCACATTGTT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATCAGAGATCCCCAGCGTCAACTAACATTATTTTGATCACATTGTT  1097

seq1  ATTTAAATAGACAGACATAGGAGTGAGTATGAATTC  1133
      ||||||||||||||||||||||||||||||||||||
seq2  ATTTAAATAGACAGACATAGGAGTGAGTATGAATTC  1133