BAC Information

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BAC

Clone NameB6Ng01-273G18
Chromosome14 (Build37)
Map Location 6,942,509 - 6,943,504
singlet/doubletsinglet
Overlap genenone
Upstream geneENSMUSG00000057445, LOC100041598, LOC100041243, EG666684, LOC100041268, LOC100041279, LOC100041651, LOC100041287, LOC100041299, LOC666637, EG622640, LOC100041333, LOC100041678, LOC100041702, LOC100041363, LOC100041721, LOC100041784, LOC100041735, LOC100041406, LOC100041825, LOC100041421, LOC100041817, LOC100041431, LOC100041438, LOC100041442, LOC100041848, LOC100041456, LOC100041758, LOC100041470, LOC100041804, LOC100041487, LOC100041747, LOC100041507, LOC100041836, LOC100041728
Downstream geneLOC100041774, LOC100041530, LOC100041540, LOC100041840, EG666844, LOC666851, LOC100041569, LOC100041970, LOC100042000, EG666874, B930046C15Rik, LOC100041600, LOC100041958, LOC100041964, LOC546590, LOC666906, LOC100042024, LOC100041664, LOC100042077, LOC100041675, LOC666329, EG666833, LOC100042043, EG666918, LOC100041700, LOC100042054, LOC100042100, EG622781, LOC100041740, LOC100038847, LOC100042129, LOC100041770, LOC100042149, LOC544988
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273G18.bB6Ng01-273G18.g
ACCGA074999GA075000
length1,187997
definitionB6Ng01-273G18.b B6Ng01-273G18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccgttttttaatgaggttttttgatt
ttttgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgaagaaactttggagtttca
ttaggtcccatttgtcaattcttgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggctttttcccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgacctcaggacaaggagataggtatggatcaattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccagtggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccatttg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tcagtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagacg
aatttgcaaattgctccttctaattcgttgaagaattgtgttggaatttt
gatggggattgctttgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaaatttttatcata
cagatctttcactttcttagttagagtcacgccaagattatttttatatt
tattttgtgactattgaaaagggtgttgtttccctaaatttctttctcag
cctgtttattctttgtgtagagaaagccatttgacttgttgagtaatttt
atatcagcttatttcacgaagctgttttatcagtttaggagttcctctgg
tggtattttttaaggtcactatatatacattctatatcatttgccagagg
atattttgagtttcatcttttccaatttgtaatcccc
gaattctaatgctcagggcatagaggcaggggataagtgcttcaagacta
tcctcatttacaaagggagtcccaggccagcctgggctacatcaaactct
gtctcaaaaccaaactaacaaaaggccagtgtttaagtaattaaccttgt
ttgaaatactttttgtaaatatttcatgatacactaaagtatttgcatac
taaaatggacattgctttacttgagacatttgaaaagtgtctaggcattt
tcttaattgaaaacattgtacaagctggcaatgggtattttaattatact
gctcagaaggctgaggcaagaggatggtaaatttgactatagtctggcct
atcttgtaaggccctatctcaaaacaacaataagacatgtatgtagcaag
aaatactgtcttagttagggtttcatttctatgaagagacaccttgacca
aggcaacagagggagagcatttaattggggctggcttacaggttcagagg
ttcagtccattatcatcaaggctggagcatggcagtgtccaggcaggcat
ggtataggaatatttgagaattccacatcttgttccaaagtcaagcagga
gaagactagcatccaggcagctaggaggagagtctacaagcccaccccca
cactgtcacacttcttccaataaggccacgccttctttaacaaggccaca
cctcctaatagtgccactccctgggccaagcatattcaaacccacacata
ctaacaatacaagaggctacaggaaaggattctagccatgagagaaatcc
catcttccactgatctctggtttcttctcagaggcaatcgtaaagtgatg
ttttcttgcggtgcttccagaaaatctctatgcacttactagtgttatat
attatttatgtacaacatacacgttaggaatatatatatatatatatata
tatatatatatatatatatatatatgtatatatatggtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_6942509_6943504
seq2: B6Ng01-273G18.g_67_1063 (reverse)

seq1  CACACACACACACATATATATACATATATATATATATATATATATATATA  50
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CACACACACAC-CATATATATACATATATATATATATATATATATATATA  49

seq1  TATATATATATATATATATT-CTTACGTGTATGTTGTACATAAATAATAT  99
      |||||||||||||||||||| || ||||||||||||||||||||||||||
seq2  TATATATATATATATATATTCCTAACGTGTATGTTGTACATAAATAATAT  99

seq1  ATAACACTTGTAAGTGCATAGAGATTTTCTGGAAGCACCGCAAGAAAACA  149
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ATAACACTAGTAAGTGCATAGAGATTTTCTGGAAGCACCGCAAGAAAACA  149

seq1  TCAC-TTACGATTGCCTCTGAGAGGAAACCAGAGATCAGTGGAAGATGGG  198
      |||| |||||||||||||||||| ||||||||||||||||||||||||||
seq2  TCACTTTACGATTGCCTCTGAGAAGAAACCAGAGATCAGTGGAAGATGGG  199

seq1  ATTTCTCTCATGGCTAGAATCCTTTCCTGTAGCCTCTTGTATTGTTAGTA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCTCATGGCTAGAATCCTTTCCTGTAGCCTCTTGTATTGTTAGTA  249

seq1  TGTGTGGGTTTGAATATGCTTGGCCCAGGGAGTGGCACTATTAGGAGGTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGGGTTTGAATATGCTTGGCCCAGGGAGTGGCACTATTAGGAGGTG  299

seq1  TGGCCTTGTTAAAGAAGGCGTGGCCTTATTGGAAGAAGTGTGACAGTGTG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTTGTTAAAGAAGGCGTGGCCTTATTGGAAGAAGTGTGACAGTGTG  349

seq1  GGGGTGGGCTTGTAGACTCTCCTCCTAGCTGCCTGGATGCTAGTCTTCTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGGGCTTGTAGACTCTCCTCCTAGCTGCCTGGATGCTAGTCTTCTC  399

seq1  CTGCTTGACTTTGGAACAAGATGTGGAATTCTCAAATATTCCTATACCAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTGACTTTGGAACAAGATGTGGAATTCTCAAATATTCCTATACCAT  449

seq1  GCCTGCCTGGACACTGCCATGCTCCAGCCTTGATGATAATGGACTGAACC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCCTGGACACTGCCATGCTCCAGCCTTGATGATAATGGACTGAACC  499

seq1  TCTGAACCTGTAAGCCAGCCCCAATTAAATGCTCTCCCTCTGTTGCCTTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAACCTGTAAGCCAGCCCCAATTAAATGCTCTCCCTCTGTTGCCTTG  549

seq1  GTCAAGGTGTCTCTTCATAGAAATGAAACCCTAACTAAGACAGTATTTCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGGTGTCTCTTCATAGAAATGAAACCCTAACTAAGACAGTATTTCT  599

seq1  TGCTACATACATGTCTTATTGTTGTTTTGAGATAGGGCCTTACAAGATAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACATACATGTCTTATTGTTGTTTTGAGATAGGGCCTTACAAGATAG  649

seq1  GCCAGACTATAGTCAAATTTACCATCCTCTTGCCTCAGCCTTCTGAGCAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGACTATAGTCAAATTTACCATCCTCTTGCCTCAGCCTTCTGAGCAG  699

seq1  TATAATTAAAATACCCATTGCCAGCTTGTACAATGTTTTCAATTAAGAAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTAAAATACCCATTGCCAGCTTGTACAATGTTTTCAATTAAGAAA  749

seq1  ATGCCTAGACACTTTTCAAATGTCTCAAGTAAAGCAATGTCCATTTTAGT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTAGACACTTTTCAAATGTCTCAAGTAAAGCAATGTCCATTTTAGT  799

seq1  ATGCAAATACTTTAGTGTATCATGAAATATTTACAAAAAGTATTTCAAAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAATACTTTAGTGTATCATGAAATATTTACAAAAAGTATTTCAAAC  849

seq1  AAGGTTAATTACTTAAACACTGGCCTTTTGTTAGTTTGGTTTTGAGACAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTAATTACTTAAACACTGGCCTTTTGTTAGTTTGGTTTTGAGACAG  899

seq1  AGTTTGATGTAGCCCAGGCTGGCCTGGGACTCCCTTTGTAAATGAGGATA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGATGTAGCCCAGGCTGGCCTGGGACTCCCTTTGTAAATGAGGATA  949

seq1  GTCTTGAAGCACTTATCCCCTGCCTCTATGCCCTGAGCATTAGAATTC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGAAGCACTTATCCCCTGCCTCTATGCCCTGAGCATTAGAATTC  997