BAC Information

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BAC

Clone NameB6Ng01-276H08
Chromosome14 (Build37)
Map Location 99,370,834 - 99,371,987
singlet/doubletsinglet
Overlap genenone
Upstream geneDach1, LOC635593, LOC619716
Downstream geneLOC100043787, 2410129H14Rik, 6720463M24Rik, Dis3, D14Ertd581e, LOC100043395, LOC100043397, Klf5, LOC100043400, LOC100043789, LOC668671, LOC668672, EG546623, Klf12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-276H08.bB6Ng01-276H08.g
ACCGA077235GA077236
length1,1841,148
definitionB6Ng01-276H08.b B6Ng01-276H08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcccattttctttgtcaagtgaagcatcaagtgagttgacagaagt
gagaagtgtgagttggaggtttgtagccagaggaagggagggaaggccta
aaacagctctcaggagactggaaggatcagggggaaaagcccagcggtgc
cccactggaggctgctaacaacgaattagaagtacttggtgctgctaatg
ggattttctccccagtaatgctcagctagacaaacagaggtgccttgggc
tattttgataaaaagaaagttgaaattaaaggccatcaacaagagagatg
ttaaagatggataaggcagttaagaggatagaaaacatacttttggactg
attcaaccatgtgaattagaaattttgttataaacacatagctgagaact
gtggctgagtattctgatgatgtgcacaagcagagaagcagatgccgatg
tgaagggagatatgcaaaggtgtacaaacctgcagacctgacctggggat
atagctcagaaaacagcacatgtctagcatatgcctagcacatgcaaagc
tctgggctccatccacagcactgaaaaagaactgaaacacagtggggagg
gaaataaaagcacaaacgcttagacagtcacatctgaacgtgacgtcatc
tttaactttcattcacctgacctaattgtcacctgacgtaagtcttggag
gtttatttgccacagtctgctaacctaggctagtcctggaagcttctggc
ctccatacaatctaatctagcctagaatgtttcagcctctgagatttact
gctaaataagctcaccctttctagatctttctgatctctggctacctggc
tcaactcagctgttctggctcaaaactctccaagctgactgattctatct
ggcatctctcttgggcctctgacttttgctctgcttgggcccaaaactaa
ctctagtaatctgtcctaatcttctggctgcttcgcattctctggcttgt
ttctgttttcacctctgtctagcttgtctctctgcagcctgcctctgtac
actgtccccggtaaaactgcccccttagagctccttcccttctcttgctc
tcttgaagtcgagatatctactctgtccagtcttttctgtaatgtcactt
gtctggcctactccaaatataagacattcacact
gaattcctttcttcacctccacagaatctgcatatgtgataaacaagtac
acttctttgatgactgatttgcctgtttaccaaacatgaggtctaatttc
tgttaaaatatttttcaatgtttttaatgaattttaataaaggtttatca
ggcacttgttatggtgcagaacttttattaaattctgtgatccataaaac
gtttttttttttttgaatgacacgtagtttagtttttcatttagaggcta
taaaagtgttcacaaaagttatgttggaaaaaaaagtgattgaaagtgct
aaaacactgtacagaatataaaatcctttcatagactttttatgacacat
gaaacatgagtcttaaaggtttaatgttactgacttttatacaaggcttt
ttaattcttgattccagttatggttctgcaaatgaactgtgacattaaaa
ggaatccggctggaactgcctgggctttctttctagatgagctctgactg
gccatcgaaggcttgccctgagacccaccccgcccacagctgattaacac
tcccttgcttttgtggagcagaggagtgagcctgcctgacagagtccctc
ctacctcaactcagtattaatgtaagggaggtcagaggattaccaggagc
aaatatgaagtgtgaaacattgctacgacttcatccttgtttccttaata
ctgtacaccgtttacggctgtaattgggatgctgccttggtgaactacag
aggcagcactgctgtgtctgtcccattaaaataatggatagaaattcact
ttgactctacctttggggatttcaagttagcgagctgacccgaattctgt
gcagaagacaaaattcatgatttctggtgaagcattagattaagccaaat
gaagttgcttctttcttttcttttttgtcagttaaaacaatagaagcttt
cagttgcgtgggactcaacagttcacagcacttgcaatgactagtctaat
agactgtttaatatcctagaagaattacactgtacagctgatttgtgtgt
cagctgaacacagcctgaatcatcaaagaagaaaagaaggcctcggtgtg
aatggcccaccccacccatggagatgccagctatggcattttctcaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_99370834_99371987
seq2: B6Ng01-276H08.g_64_1211

seq1  GAATTCCTTTCTTCACCTCCACAGAATCTGCATATGTGATAAACAAGTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTCTTCACCTCCACAGAATCTGCATATGTGATAAACAAGTAC  50

seq1  ACTTCTTTGATGACTGATTTGCCTGTTTACCAAACATGAGGTCTAATTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTTTGATGACTGATTTGCCTGTTTACCAAACATGAGGTCTAATTTC  100

seq1  TGTTAAAATATTTTTCAATGTTTTTAATGAATTTTAATAAAGGTTTATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAAATATTTTTCAATGTTTTTAATGAATTTTAATAAAGGTTTATCA  150

seq1  GGCACTTGTTATGGTGCAGAACTTTTATTAAATTCTGTGATCCATAAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTTGTTATGGTGCAGAACTTTTATTAAATTCTGTGATCCATAAAAC  200

seq1  GTTTTTTTTTTTTTGAATGACACGTAGTTTAGTTTTTCATTTAGAGGCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTTTTTTTTGAATGACACGTAGTTTAGTTTTTCATTTAGAGGCTA  250

seq1  TAAAAGTGTTCACAAAAGTTATGTTGGAAAAAAAAGTGATTGAAAGTGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTGTTCACAAAAGTTATGTTGGAAAAAAAAGTGATTGAAAGTGCT  300

seq1  AAAACACTGTACAGAATATAAAATCCTTTCATAGACTTTTTATGACACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACTGTACAGAATATAAAATCCTTTCATAGACTTTTTATGACACAT  350

seq1  GAAACATGAGTCTTAAAGGTTTAATGTTACTGACTTTTATACAAGGCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACATGAGTCTTAAAGGTTTAATGTTACTGACTTTTATACAAGGCTTT  400

seq1  TTAATTCTTGATTCCAGTTATGGTTCTGCAAATGAACTGTGACATTAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTCTTGATTCCAGTTATGGTTCTGCAAATGAACTGTGACATTAAAA  450

seq1  GGAATCCGGCTGGAACTGCCTGGGCTTTCTTTCTAGATGAGCTCTGACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCCGGCTGGAACTGCCTGGGCTTTCTTTCTAGATGAGCTCTGACTG  500

seq1  GCCATCGAAGGCTTGCCCTGAGACCCACCCCGCCCACAGCTGATTAACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCGAAGGCTTGCCCTGAGACCCACCCCGCCCACAGCTGATTAACAC  550

seq1  TCCCTTGCTTTTGTGGAGCAGAGGAGTGAGCCTGCCTGACAGAGTCCCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTGCTTTTGTGGAGCAGAGGAGTGAGCCTGCCTGACAGAGTCCCTC  600

seq1  CTACCTCAACTCAGTATTAATGTAAGGGAGGTCAGAGGATTACCAGGAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTCAACTCAGTATTAATGTAAGGGAGGTCAGAGGATTACCAGGAGC  650

seq1  AAATATGAAGTGTGAAACATTGCTACGACTTCATCCTTGTTTCCTTAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGAAGTGTGAAACATTGCTACGACTTCATCCTTGTTTCCTTAATA  700

seq1  CTGTACACCGTTTACGGCTGTAATTGGGATGCTGCCTTGGTGAACTACAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACACCGTTTACGGCTGTAATTGGGATGCTGCCTTGGTGAACTACAG  750

seq1  AGGCAGCACTGCTGTGTCTGTCCCATTAAAATAATGGATAGAAATTCACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGCACTGCTGTGTCTGTCCCATTAAAATAATGGATAGAAATTCACT  800

seq1  TTGACTCTACCTTTGGGGATTTCAAGTTAGCGAGCTGACCCGAATTCTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTCTACCTTTGGGGATTTCAAGTTAGCGAGCTGACCCGAATTCTGT  850

seq1  GCAGAAGAC-AAATTCATGATTTCTGGTGAAGCATTAGATTAAGCCAAAT  899
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAGACAAAATTCATGATTTCTGGTGAAGCATTAGATTAAGCCAAAT  900

seq1  GAAGTTGCTTCTTTCTTTTCTTTTTTGTCAGTTAAAACAATAGAAGCTTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTGCTTCTTTCTTTTCTTTTTTGTCAGTTAAAACAATAGAAGCTTT  950

seq1  CAGTTGCGTGGGACTCAACAGTTCACAGCACTTGCAATGACTAGTCT-AT  998
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CAGTTGCGTGGGACTCAACAGTTCACAGCACTTGCAATGACTAGTCTAAT  1000

seq1  AGACTGTTTAATATCCTAGAAGAATTACACTGTACCAGCTGGATTTGTGT  1048
      |||||||||||||||||||||||||||||||||| ||||| |||||||||
seq2  AGACTGTTTAATATCCTAGAAGAATTACACTGTA-CAGCT-GATTTGTGT  1048

seq1  GTCAGCTTGACACAGCTGGAATCATCACAG-AGAAA--GAGGCCTCGGTT  1095
      |||||||  |||||||  ||||||||| || |||||   ||||||||| |
seq2  GTCAGCTGAACACAGCCTGAATCATCAAAGAAGAAAAGAAGGCCTCGG-T  1097

seq1  GTGGAAATGCCCCACCCCCACCCCTGTGAGATGCCCCAGCTGTTGGGCAT  1145
      |||  |||| |||| |||||||| || ||||||  |||||| |  |||||
seq2  GTG--AATGGCCCA-CCCCACCCATG-GAGATG--CCAGCTAT--GGCAT  1139

seq1  TTTCTCAAT  1154
      |||||||||
seq2  TTTCTCAAT  1148