BAC Information

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BAC

Clone NameB6Ng01-279M07
Chromosome14 (Build37)
Map Location 110,962,113 - 110,962,771
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC640892
Downstream geneSlitrk6, EG668772, EG622052, LOC100043491, LOC100043494
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-279M07.bB6Ng01-279M07.g
ACCGA079665GA079666
length1,0031,034
definitionB6Ng01-279M07.b B6Ng01-279M07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctccttcacctaggacgtgtcactccctgattggctgcagcccat
cggccgagttgacgtcacggggaaggcagagcacaccctcggcacatgcg
cagattatttgtttaccacttagaacacagctgtcagcgccatcttgtaa
cggcgaatgtgggcgcggctcccaacaatagggcagcagccaccacttta
gtggccttatctgccaaatcatttcccagagccatggggccaggtaggcc
tgaatgggctctaacatgagtaatataaacaggaaatcttctagataaca
aaactaattgtatttgctgaaaaatattggcaactctactggaaggctta
atcactccagccacttctaaaagatttactgcattaaccacataacagga
atctgacacaatattaaggggttctaaaaaggtttttaaaacttctaaaa
ccactaaacattctaccacttgaggtgaattttcattatattgtttggat
accactttaccattagccacataggcacctatgccagtttttgatccatc
agtatataccacaatcccatttttaagtgggtttcttactgttatttgtg
gaaaaacaacagattgattttgggcaaactgtaaaattggatgttttgga
taatggttatctatttgtcctgaaaaggaggtaactaaaactgcccaatc
attagatgtggctgccaaggtttgaacctgtgcagcggtataaggtacaa
ttaaaagatatggactttgcccaaagtgggtgattgctgcttttaggcct
ttaagggcaagctgtgcaattgcatcacgataccaatctattattttagc
tggggatacgtttggatggatccacaacaatggcccattctgccacaaaa
ctgcggttggcaattgtgctgtcttaaagacacacaaactgaaaagctgc
gaatcctcatacgttgtaattgtgcattctgtaggctttttccacctttt
gta
gaattcaaactcaaatcagtcagctctgtgcagctcagagttagggattt
ggaagtctgtgcagtggagtacaggcagtgggattgatttcaggacagtt
ctgttcagtcaggtgagttcagtttggtcagtcaggacaggtgactgact
gtgcagaggagttgaactcatttctgtttgatgcaggtcagcagagacag
ttaaaggtaaaaaatgaagaggaatcaggacatgagaatatattgccaga
cttagttttaggctaaacagagcaattcaatgagaagccaaattgcatca
ggcatcttggagaggagtttgagtcagaatagttgagttgaaccagcaag
agttcagaagggtgaacttattcagcagtaatcctcagagatgacaatta
cttcaggggaataaaagttacttttataagtttcctttggatgtaacaac
atattggacctataaagtcacagcagctgtggtgaccagtaggagactta
caaaagagtaaatttatcaacattcagaatggaatgagaaatgactctta
agttctcacacttgagcaattggttattgatgctgttgtgcccaaagaga
cagttttcttcaggcaactgccccatggcaacttgctgctccagtggtta
gcttgaccctgatgtacttatggggaatattaactgagtggtttattaaa
taaagaaaagggaggaaatgaaattgggagaagaatgttagaggagattc
tcagagaaatgagataggtgatgtgtgtggttattgtgtaaatatgttgc
attcatgtatgggatttctagagaatgatttttaaaataaatatgtattt
tcattttttgttttggttatcatatttaaagttatcaaaaacaagaacaa
gattatttgaatcttttatgttttctgatatctaaggggtacataattct
tttaaaaaataattttattttctttacttacatttcagccatttgttcct
cttccaaaccccccttgcaaggttccctcatccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_110962113_110962771
seq2: B6Ng01-279M07.g_447_1101 (reverse)

seq1  GGGATGAGGAATGGAGTGAGGAACTTTGCA--GGGGGGTTGGGAGAGGAA  48
      ||||||||           ||||| |||||  ||||| |||| |||||||
seq2  GGGATGAG-----------GGAACCTTGCAAGGGGGGTTTGGAAGAGGAA  39

seq1  C-AATGGCTGAAATGTAAGTAA--GAAATAAAA-TATTTTTAAAAAG-AT  93
      | ||||||||||||||||||||   |||||||| ||||||| ||||| ||
seq2  CAAATGGCTGAAATGTAAGTAAAGAAAATAAAATTATTTTTTAAAAGAAT  89

seq1  TATGTACCCCTTAGATATCAGAAAACATAAAAGA-TCAAATAAATCTGTT  142
      |||||||||||||||||||||||||||||||||| ||||||||   ||||
seq2  TATGTACCCCTTAGATATCAGAAAACATAAAAGATTCAAATAATCTTGTT  139

seq1  CTTTGTTTTTGATAACTTAAAATATGATAACCAAAACAAAAAATGAAAAT  192
      | |||||||||||||||| |||||||||||||||||||||||||||||||
seq2  C-TTGTTTTTGATAACTTTAAATATGATAACCAAAACAAAAAATGAAAAT  188

seq1  ACATATTTATTTTAAAAATCATTCTCTAGAAATCCCATACATGAATGCAA  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTTATTTTAAAAATCATTCTCTAGAAATCCCATACATGAATGCAA  238

seq1  CATATTTACACAATAACCACACACATCACCTATCTCATTTCTCTGAGAAT  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTACACAATAACCACACACATCACCTATCTCATTTCTCTGAGAAT  288

seq1  CTCCTCTAACATTCTTCTCCCAATTTCATTTCCTCCCTTTTCTTTATTTA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCTAACATTCTTCTCCCAATTTCATTTCCTCCCTTTTCTTTATTTA  338

seq1  ATAAACCACTCAGTTAATATTCCCCATAAGTACATCAGGGTCAAGCTAAC  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACCACTCAGTTAATATTCCCCATAAGTACATCAGGGTCAAGCTAAC  388

seq1  CACTGGAGCAGCAAGTTGCCATGGGGCAGTTGCCTGAAGAAAACTGTCTC  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGAGCAGCAAGTTGCCATGGGGCAGTTGCCTGAAGAAAACTGTCTC  438

seq1  TTTGGGCACAACAGCATCAATAACCAATTGCTCAAGTGTGAGAACTTAAG  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGCACAACAGCATCAATAACCAATTGCTCAAGTGTGAGAACTTAAG  488

seq1  AGTCATTTCTCATTCCATTCTGAATGTTGATAAATTTACTCTTTTGTAAG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATTTCTCATTCCATTCTGAATGTTGATAAATTTACTCTTTTGTAAG  538

seq1  TCTCCTACTGGTCACCACAGCTGCTGTGACTTTATAGGTCCAATATGTTG  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTACTGGTCACCACAGCTGCTGTGACTTTATAGGTCCAATATGTTG  588

seq1  TTACATCCAAAGGAAACTTATAAAAGTAACTTTTATTCCCCTGAAGTAAT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATCCAAAGGAAACTTATAAAAGTAACTTTTATTCCCCTGAAGTAAT  638

seq1  TGTCATCTCTGAGGATT  659
      |||||||||||||||||
seq2  TGTCATCTCTGAGGATT  655