BAC Information

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BAC

Clone NameB6Ng01-284B17
Chromosome14 (Build37)
Map Location 121,506,608 - 121,641,661
singlet/doubletdoublet
Overlap geneFarp1, LOC100043837
Upstream geneLOC100043831, Mbnl2, Rap2a, LOC668835, LOC668837, Ranbp5
Downstream geneStk24, Slc15a1, LOC100043577, Dock9, LOC668843, Phgdhl1, Gpr18, Ebi2, Timm8a2, Tm9sf2, LOC621710, Clybl, 1700108J01Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284B17.bB6Ng01-284B17.g
ACCGA082892GA082893
length1,1331,146
definitionB6Ng01-284B17.b B6Ng01-284B17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(121,506,608 - 121,507,719)(121,640,513 - 121,641,661)
sequence
gaattctccagcaagatggtaaccgctgtgggactattattgttgatagt
ggttcttttttttttttttttttttttttttttttgcttgttttgtttcg
tttttcagacagagtctagctctgtagcccaagctagccccaaattcaaa
acctccctccttccctcccttgcttccaagattacagatatgtacaccac
tccctgggggttgttaaagcaaaacaaaacacccacggcctgatcagata
tggccgttactgtatacctagtaagatctgtagacgagtatgtgagctga
gggtaggaggcgcaaacatgtctcaaggcctccagagtcttggaggtgca
gctaaggggtgtgtagggtggtgaccctgcagctcactgaaccccttggc
actggaaaataggagtctgaactaaatcacatatttcccggtaacacctc
gccgataaactcaacatctttgctgaagctggagacaccgccttcacact
tgcctttgacgtcgcagaaaagaccacatcaaaaaaatttctgcttttct
gatggtagcaaaattgcctaagctgttttggaaccctaattaggaacatt
ctggagtcaggcctgcggtgattaaatggggctttcatttccttaccttt
gagatgaaatgggcttttcattgccctgaccctcacagaaacctgggcaa
gccatcaacagaagcttgtgcttccatgctgtctggctcagggaagggca
ggattttaaaagccgtcttcctgatccttgggctctgtcaaagagaaaag
cggacatttgtccctctcggaacaccctgtgggtttttttctggaaaagt
caaagcgtggggcattttaaccaggtctcttctctctctctctctctctc
tttttaagttttcatagaggttgcctgttttctatttttcttttcagccg
tcttaggaaatgagcccttgtttggacaagccccgctagccctgttagtc
tcttggctttccacggggggagatgaagcacacctgttatgggggagggg
aagcttcctgcctgcttggcaacgttctgttggctctctctgggtagcag
gatagacctacattaaatttattgtccttttaa
gtgctgtgggctgtgagaccaggctcctggtggagtggatcttgctgtgc
tttctgagggaatcacacaagacagctaaagtcaggacagctttgattag
atgaagcactttgggtacttcaagcatggaagtacccaaagctttccttt
ctttgtcaatgtgagagatacacaatattttctaaatgccggtgtggaaa
acactatgttctcctcagaatcctgttctagctgctgaaggactgagact
gactgagcactgcctgctggctatggggaaagtcaagagggaggagtaga
caccaggcatccaaggctctcatctgcaagctaacaatgtatccatttgt
acatttccttcagtattttctagatcagatctatgacagggataacgacc
aaagaccatcttactcttttacacaatgtagaccaggagaaaaagctccc
ctgtaagaaaacagagccgtcagggacgacagtgcgagcagtacaggccc
tttctcttgtcccctacctgtgaacaggcattacagactttcaagtactc
atgagatggtgtaactccactccagtgtgcacacatctctccacacggaa
aggccccagggcgtctacctcctgcatggtcttcaacataacacctgcta
gtcatctaagaaaatcatggacttactatccttgggtatacaggcaaggc
tgtttctggtgagctagcggcttggatatataggcaagagcccactggca
tcacatttctgggttctggacacgagaaaccataccagacttatttcagc
aaaattaggataaagcattaaaatgacctaaacatctgttgacagggagt
gggcccgataaaaacacagagtgctctgatttgccggagctccatgtcaa
gtcaatggactcacatgagctcagtagtgacaaggttctaacacctgctc
gtggatatggagtacagcagtattacaagccgtgtgtcagcatgtataga
aatgaaaatttcacacaccagggcatcacccataccacacaggtatgtca
gccatgaactccagagaagacattaagtctagagctcaattggaaaaaca
gagagaggcataagttgtgaaccgaaggtagtctttctctactaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_121506608_121507719
seq2: B6Ng01-284B17.b_46_1178

seq1  GAATTCTCCAGCAAGATGGTAACCGCTGTGGGACTATTATTGTTGATAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCAGCAAGATGGTAACCGCTGTGGGACTATTATTGTTGATAGT  50

seq1  GGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTTGTTTTGTTTCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTTGTTTTGTTTCG  100

seq1  TTTTTCAGACAGAGTCTAGCTCTGTAGCCCAAGCTAGCCCCAAATTCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCAGACAGAGTCTAGCTCTGTAGCCCAAGCTAGCCCCAAATTCAAA  150

seq1  ACCTCCCTCCTTCCCTCCCTTGCTTCCAAGATTACAGATATGTACACCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCCTCCTTCCCTCCCTTGCTTCCAAGATTACAGATATGTACACCAC  200

seq1  TCCCTGGGGGTTGTTAAAGCAAAACAAAACACCCACGGCCTGATCAGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGGGGGTTGTTAAAGCAAAACAAAACACCCACGGCCTGATCAGATA  250

seq1  TGGCCGTTACTGTATACCTAGTAAGATCTGTAGACGAGTATGTGAGCTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCGTTACTGTATACCTAGTAAGATCTGTAGACGAGTATGTGAGCTGA  300

seq1  GGGTAGGAGGCGCAGACATGTCTCAAGGCCTCCAGAGTCTTGGAGGTGCA  350
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GGGTAGGAGGCGCAAACATGTCTCAAGGCCTCCAGAGTCTTGGAGGTGCA  350

seq1  GCTAAGGGGTGTGTAGGGTGGTGACCCTGCAGCTCACTGAACCCCTTGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGGGGTGTGTAGGGTGGTGACCCTGCAGCTCACTGAACCCCTTGGC  400

seq1  ACTGGAAAATAGGAGTCTGAACTAAATCACATATTTCCCGGTAACACCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAAAATAGGAGTCTGAACTAAATCACATATTTCCCGGTAACACCTC  450

seq1  GCCGATAAACTCAACATCTTTGCTGAAGCTGGAGACACCGCCTTCACACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGATAAACTCAACATCTTTGCTGAAGCTGGAGACACCGCCTTCACACT  500

seq1  TGCCTTTGACGTCGCAGAAAAGACCACATCAAAAAAATTTCTGCTTTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTGACGTCGCAGAAAAGACCACATCAAAAAAATTTCTGCTTTTCT  550

seq1  GATGGTAGCAAAATTGCCTAAGCTGTTTTGGAACCCTAATTAGGAACATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTAGCAAAATTGCCTAAGCTGTTTTGGAACCCTAATTAGGAACATT  600

seq1  CTGGAGTCAGGCCTGCGGTGATTAAATGGGGCTTTCATTTCCTTACCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGTCAGGCCTGCGGTGATTAAATGGGGCTTTCATTTCCTTACCTTT  650

seq1  GAGATGAAATGGGCTTTTCATTGCCCTGACCCTCACAGAAACCTGGGCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGAAATGGGCTTTTCATTGCCCTGACCCTCACAGAAACCTGGGCAA  700

seq1  GCCATCAACAGAGGCTTGTGCTTCCATGCTGTCTGGCTCAGGGAAGGGCA  750
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GCCATCAACAGAAGCTTGTGCTTCCATGCTGTCTGGCTCAGGGAAGGGCA  750

seq1  GGATTTTAAAAGCCGTCTTCCTGATCCTTGGGCTCTGTCAAAGAGAAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTTAAAAGCCGTCTTCCTGATCCTTGGGCTCTGTCAAAGAGAAAAG  800

seq1  CGGACATTTGT-CCTCTCGGAACACCCTGTGGG-TTTTTTCTGGAAAAGT  848
      ||||||||||| ||||||||||||||||||||| ||||||||||||||||
seq2  CGGACATTTGTCCCTCTCGGAACACCCTGTGGGTTTTTTTCTGGAAAAGT  850

seq1  CAAGGC--TGGGCA-TTTAACCAGGTCTC-TCTCTCTCTCTCTCTCTCTC  894
      ||| ||   ||||| |||||||||||||| ||||||||||||||||||||
seq2  CAAAGCGTGGGGCATTTTAACCAGGTCTCTTCTCTCTCTCTCTCTCTCTC  900

seq1  TTTTT-AGTTTTCATAGA-GTTG-CTG-TTTCTATTTT--CTTTCAGCGG  938
      ||||| |||||||||||| |||| ||| ||||||||||   ||||||| |
seq2  TTTTTAAGTTTTCATAGAGGTTGCCTGTTTTCTATTTTTCTTTTCAGCCG  950

seq1  TCTTAGGAAATGAGCCCT--GTTGGACAAG-CCCGCTAG-CCTGTTAGTC  984
      ||||||||||||||||||   ||||||||| |||||||| ||||||||||
seq2  TCTTAGGAAATGAGCCCTTGTTTGGACAAGCCCCGCTAGCCCTGTTAGTC  1000

seq1  TC-TGGCTTTCCAC--GGGGAGATGAAGCACACCTG-TATGGGG--AGGG  1028
      || |||||||||||  |||||||||||||||||||| |||||||   |||
seq2  TCTTGGCTTTCCACGGGGGGAGATGAAGCACACCTGTTATGGGGGAGGGG  1050

seq1  AAGCTCCCTGCCCTGCTTTGCAGCGTTCTG-TGGCTCTC-CTGGAGAAGC  1076
      ||||| |||| ||||||| ||| ||||||| |||||||| |||| | |||
seq2  AAGCTTCCTG-CCTGCTTGGCAACGTTCTGTTGGCTCTCTCTGG-GTAGC  1098

seq1  AGGATAGACCTACATAAAATTTAATTGTCCCTTTAA  1112
      ||||||||||||||| |||||| ||||||| |||||
seq2  AGGATAGACCTACATTAAATTT-ATTGTCCTTTTAA  1133

seq1: chr14_121640513_121641661
seq2: B6Ng01-284B17.g_74_1219 (reverse)

seq1  TCTAGTAGA-AAAAACTACC-TCGGGTCACAACTTTTTTTTCCTCTCTCT  48
      ||||||||| ||| |||||| |||| ||||||||| |   | |||||| |
seq2  TCTAGTAGAGAAAGACTACCTTCGGTTCACAACTTATGCCT-CTCTCTGT  49

seq1  TTTTCCAAATGAAACTTCTAGA-TTTATGTCTCTTCTGGAGTTCAATGCT  97
      |||||||| ||  |  |||||| || ||||||  |||||||||||  |||
seq2  TTTTCCAATTG--AGCTCTAGACTTAATGTCTTCTCTGGAGTTCATGGCT  97

seq1  GACATACTTGTGT-GTATGGGTGATTGCCCTTGGTGTGTG-AATTTTCAT  145
      ||||||| ||||| |||||||||| ||||| ||||||||| |||||||||
seq2  GACATACCTGTGTGGTATGGGTGA-TGCCC-TGGTGTGTGAAATTTTCAT  145

seq1  TTCTATACATGCTGACACACGGCTTGTAATACTGCTGTACTCCATATCCA  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATACATGCTGACACACGGCTTGTAATACTGCTGTACTCCATATCCA  195

seq1  CGGAGCAGGTGTTAGAACCTTGTCACCTACTGAGCTCATGTGAGTCCATT  245
      | ||||||||||||||||||||||| |||||||||||||||||||||| |
seq2  C-GAGCAGGTGTTAGAACCTTGTCA-CTACTGAGCTCATGTGAGTCCA-T  242

seq1  TGACTTGACATGGAGCTCCGGCAAATCAGAGCACTCTGTGTTTTTATCGG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTGACATGGAGCTCCGGCAAATCAGAGCACTCTGTGTTTTTATCGG  292

seq1  GCCCACTCCCTGTCAACAGATGTTTAGGTCATTTTAATGCTTTATCCTAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCACTCCCTGTCAACAGATGTTTAGGTCATTTTAATGCTTTATCCTAA  342

seq1  TTTTGCTGAAATAAGTCTGGTATGGTTTCTCGTGTCCAGAACCCAGAAAT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTGAAATAAGTCTGGTATGGTTTCTCGTGTCCAGAACCCAGAAAT  392

seq1  GTGATGCCAGTGGGCTCTTGCCTATATATCCAAGCCGCTAGCTCACCAGA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGCCAGTGGGCTCTTGCCTATATATCCAAGCCGCTAGCTCACCAGA  442

seq1  AACAGCCTTGCCTGTATACCCAAGGATAGTAAGTCCATGATTTTCTTAGA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCCTTGCCTGTATACCCAAGGATAGTAAGTCCATGATTTTCTTAGA  492

seq1  TGACTAGCAGGTGTTATGTTGAAGACCATGCAGGAGGTAGACGCCCTGGG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTAGCAGGTGTTATGTTGAAGACCATGCAGGAGGTAGACGCCCTGGG  542

seq1  GCCTTTCCGTGTGGAGAGATGTGTGCACACTGGAGTGGAGTTACACCATC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTCCGTGTGGAGAGATGTGTGCACACTGGAGTGGAGTTACACCATC  592

seq1  TCATGAGTACTTGAAAGTCTGTAATGCCTGTTCACAGGTAGGGGACAAGA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGAGTACTTGAAAGTCTGTAATGCCTGTTCACAGGTAGGGGACAAGA  642

seq1  GAAAGGGCCTGTACTGCTCGCACTGTCGTCCCTGACGGCTCTGTTTTCTT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGGCCTGTACTGCTCGCACTGTCGTCCCTGACGGCTCTGTTTTCTT  692

seq1  ACAGGGGAGCTTTTTCTCCTGGTCTACATTGTGTAAAAGAGTAAGATGGT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGGAGCTTTTTCTCCTGGTCTACATTGTGTAAAAGAGTAAGATGGT  742

seq1  CTTTGGTCGTTATCCCTGTCATAGATCTGATCTAGAAAATACTGAAGGAA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGTCGTTATCCCTGTCATAGATCTGATCTAGAAAATACTGAAGGAA  792

seq1  ATGTACAAATGGATACATTGTTAGCTTGCAGATGAGAGCCTTGGATGCCT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACAAATGGATACATTGTTAGCTTGCAGATGAGAGCCTTGGATGCCT  842

seq1  GGTGTCTACTCCTCCCTCTTGACTTTCCCCATAGCCAGCAGGCAGTGCTC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCTACTCCTCCCTCTTGACTTTCCCCATAGCCAGCAGGCAGTGCTC  892

seq1  AGTCAGTCTCAGTCCTTCAGCAGCTAGAACAGGATTCTGAGGAGAACATA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGTCTCAGTCCTTCAGCAGCTAGAACAGGATTCTGAGGAGAACATA  942

seq1  GTGTTTTCCACACCGGCATTTAGAAAATATTGTGTATCTCTCACATTGAC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTCCACACCGGCATTTAGAAAATATTGTGTATCTCTCACATTGAC  992

seq1  AAAGAAAGGAAAGCTTTGGGTACTTCCATGCTTGAAGTACCCAAAGTGCT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGGAAAGCTTTGGGTACTTCCATGCTTGAAGTACCCAAAGTGCT  1042

seq1  TCATCTAATCAAAGCTGTCCTGACTTTAGCTGTCTTGTGTGATTCCCTCA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTAATCAAAGCTGTCCTGACTTTAGCTGTCTTGTGTGATTCCCTCA  1092

seq1  GAAAGCACAGCAAGATCCACTCCACCAGGAGCCTGGTCTCACAGCCCACA  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCACAGCAAGATCCACTCCACCAGGAGCCTGGTCTCACAGCCCACA  1142

seq1  GCAC  1149
      ||||
seq2  GCAC  1146