BAC Information

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BAC

Clone NameB6Ng01-284P23
Chromosome14 (Build37)
Map Location 113,046,980 - 113,166,467
singlet/doubletdoublet
Overlap genenone
Upstream geneSlitrk5, LOC100043501, EG223186
Downstream geneLOC100043509, Tpm3-rs7, LOC100043510
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284P23.bB6Ng01-284P23.g
ACCGA083559GA083560
length9781,040
definitionB6Ng01-284P23.b B6Ng01-284P23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(113,046,980 - 113,047,636)(113,165,426 - 113,166,467)
sequence
gaattcttcttacccaggaacagtatactattgaaatatcaagcacattg
gattttttttctatgtctattgaggttaatgccattgatttgtgatcatt
aggccttagacacatcacttttatatttgaattttacattgctgttacat
aaaattcaagcaaaatatttaaatattttatatatttaaaaataaagtgt
ttaaaaattaagtattttaagaattaagtaggtctgaacaggtgagaggg
tgcgccagagaaccggacagcttctgggacaggcggaagcacagagcccc
tgaggcagcaccctttgcgggccgcagacagccggccaccatcccgacca
gagaacaggtgtccgcctggcttgggaggtagcctcagcctcaggagcag
cggtcgccatcttggttcggggactccctggaacttaggaatttagtctg
cacaggtgagagtctgcaccacagaagctgacagcttcgggaacttccaa
agcaaaacagcttctgagaaaggccctgttttgggccttcttcttcggcc
aggaggaggtccaaacacaagatatctgcgcaccttccctgtaagagagc
ttgccagcagagagtgctctgagcactgaaactcagaggagagaatctgt
ctcccaggtctgctgatagacggtaacagaatcaccagaagaacaatctc
taaacagagtcaactataactactaactccagagattaccagatggcaaa
aggtaaatgtaggaatcttactaacaggaaccaagaccactcaccatcat
cagaacccagcactcccacttcgtccagtccaggacaccccaacacaccc
gaaaacctagacctagatttaaaagcatatctcatgatgatggtagagga
catcaagaagactttaataaatcacttaaagaaatacaggagaacactgc
taagagttacaagtccttaaagaaaaac

gaattcaattgtgttccagggacccttttgcttcctagtacatttaatgt
tgttttcatatagaagtgtattctgatcattctcccttctcatctcctgc
cacacccttcacactacctacctgtaaaactccgcacctcctctctctgt
ctcctgcagacaattaatttttatattgtagtgcatgtctgctggagata
gcctatgggaaataggtgtgagtactcctgacaagttcgcctcttagtgc
tggatcctctctgctttagacccacgcagtctcttgaaatggtgttacag
tttctgtttgttcatataagaaactgcctaatttttcgaaggccacgttt
acactgatacctaaaccacacaaagaaccagtcaaaaaagaaaagaatat
agtaatttgtcttaaatactcaaaaaatacttgccaaaacaatccaatat
tagatcaaaaagattttgcacttcaatcaactagacttcacttcagagat
gtagagatgtctcacatacataagtcaagaaatgcaatccaccatatgaa
catggtaagaataattatctctttacttgtagttactctgctttaataga
aatttcatgagccatgtcccagggtgagccattccttgtttaaagaaact
accattgaatgctttcatgaactgtaaggcatggtagtatattctcttag
ttctaactttctagaatatcaataagccctttatttcagtttcacaaact
gtatgattagagaccaaaactcaagccctgaaagtcactatgttgtattt
atgagccttttgaaaagaattcaacctgaagaataagtggtaggcaagcc
tcatatggctttatggaagaagtatggagttagtcacctccatctctctc
tgattacccctggtctcctgttcacatgccataggcaaattcactcagaa
ttctaaagtagtgaattagtattgcctaggacattagttctagggcagca
tacatttatactaaaacatcatttgtgagtagaaccatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_113046980_113047636
seq2: B6Ng01-284P23.b_45_701

seq1  GAATTCTTCTTACCCAGGAACAGTATACTATTGAAATATCAAGCACATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTTACCCAGGAACAGTATACTATTGAAATATCAAGCACATTG  50

seq1  GATTTTTTTTCTATGTCTATTGAGGTTAATGCCATTGATTTGTGATCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTTTTCTATGTCTATTGAGGTTAATGCCATTGATTTGTGATCATT  100

seq1  AGGCCTTAGACACATCACTTTTATATTTGAATTTTACATTGCTGTTACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTTAGACACATCACTTTTATATTTGAATTTTACATTGCTGTTACAT  150

seq1  AAAATTCAAGCAAAATATTTAAATATTTTATATATTTAAAAATAAAGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCAAGCAAAATATTTAAATATTTTATATATTTAAAAATAAAGTGT  200

seq1  TTAAAAATTAAGTATTTTAAGAATTAAGTAGGTCTGAACAGGTGAGAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAATTAAGTATTTTAAGAATTAAGTAGGTCTGAACAGGTGAGAGGG  250

seq1  TGCGCCAGAGAACCGGACAGCTTCTGGGACAGGCGGAAGCACAGAGCCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGCCAGAGAACCGGACAGCTTCTGGGACAGGCGGAAGCACAGAGCCCC  300

seq1  TGAGGCAGCACCCTTTGCGGGCCGCAGACAGCCGGCCACCATCCCGACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCAGCACCCTTTGCGGGCCGCAGACAGCCGGCCACCATCCCGACCA  350

seq1  GAGAACAGGTGTCCGCCTGGCTTGGGAGGTAGCCTCAGCCTCAGGAGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACAGGTGTCCGCCTGGCTTGGGAGGTAGCCTCAGCCTCAGGAGCAG  400

seq1  CGGTCGCCATCTTGGTTCGGGGACTCCCTGGAACTTAGGAATTTAGTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTCGCCATCTTGGTTCGGGGACTCCCTGGAACTTAGGAATTTAGTCTG  450

seq1  CACAGGTGAGAGTCTGCACCACAGAAGCTGACAGCTTCGGGAACTTCCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGTGAGAGTCTGCACCACAGAAGCTGACAGCTTCGGGAACTTCCAA  500

seq1  AGCAAAACAGCTTCTGAGAAAGGCCCTGTTTTGGGCCTTCTTCTTCGGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAACAGCTTCTGAGAAAGGCCCTGTTTTGGGCCTTCTTCTTCGGCC  550

seq1  AGGAGGAGGTCCAAACACAAGATATCTGCGCACCTTCCCTGTAAGAGAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGAGGTCCAAACACAAGATATCTGCGCACCTTCCCTGTAAGAGAGC  600

seq1  TTGCCAGCAGAGAGTGCTCTGAGCACTGAAACTCAGAGGAGAGAATCTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCAGCAGAGAGTGCTCTGAGCACTGAAACTCAGAGGAGAGAATCTGT  650

seq1  CTCCCAG  657
      |||||||
seq2  CTCCCAG  657


seq1: chr14_113165426_113166467
seq2: B6Ng01-284P23.g_69_1108 (reverse)

seq1  TGAT-GTTCTAATTCACAAATGAATGTTTAGTATAAATGTATGCTGCCCT  49
      |||| ||||| | ||||||||||   ||||||||||||||||||||||||
seq2  TGATGGTTCT-ACTCACAAATGATGTTTTAGTATAAATGTATGCTGCCCT  49

seq1  AAGAACTAATGTTCTAGGCAATACTAATTCACTAACTTTAGAATTCTGAG  99
       ||||||||||| |||||||||||||||||||| ||||||||||||||||
seq2  -AGAACTAATGTCCTAGGCAATACTAATTCACT-ACTTTAGAATTCTGAG  97

seq1  TGAATTTGCCTATGGCATGTGAACAGGAGACCAGGGGTAATCAGAGAGAG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTGCCTATGGCATGTGAACAGGAGACCAGGGGTAATCAGAGAGAG  147

seq1  ATGGAGGTGACTAACTCCATACTTCTTCCATAAAGCCATATGAGGCTTGC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGGTGACTAACTCCATACTTCTTCCATAAAGCCATATGAGGCTTGC  197

seq1  CTACCACTTATTCTTCAGGTTGAATTCTTTTCAAAAGGCTCATAAATACA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCACTTATTCTTCAGGTTGAATTCTTTTCAAAAGGCTCATAAATACA  247

seq1  ACATAGTGACTTTCAGGGCTTGAGTTTTGGTCTCTAATCATACAGTTTGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGTGACTTTCAGGGCTTGAGTTTTGGTCTCTAATCATACAGTTTGT  297

seq1  GAAACTGAAATAAAGGGCTTATTGATATTCTAGAAAGTTAGAACTAAGAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTGAAATAAAGGGCTTATTGATATTCTAGAAAGTTAGAACTAAGAG  347

seq1  AATATACTACCATGCCTTACAGTTCATGAAAGCATTCAATGGTAGTTTCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATACTACCATGCCTTACAGTTCATGAAAGCATTCAATGGTAGTTTCT  397

seq1  TTAAACAAGGAATGGCTCACCCTGGGACATGGCTCATGAAATTTCTATTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACAAGGAATGGCTCACCCTGGGACATGGCTCATGAAATTTCTATTA  447

seq1  AAGCAGAGTAACTACAAGTAAAGAGATAATTATTCTTACCATGTTCATAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGAGTAACTACAAGTAAAGAGATAATTATTCTTACCATGTTCATAT  497

seq1  GGTGGATTGCATTTCTTGACTTATGTATGTGAGACATCTCTACATCTCTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGATTGCATTTCTTGACTTATGTATGTGAGACATCTCTACATCTCTG  547

seq1  AAGTGAAGTCTAGTTGATTGAAGTGCAAAATCTTTTTGATCTAATATTGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAAGTCTAGTTGATTGAAGTGCAAAATCTTTTTGATCTAATATTGG  597

seq1  ATTGTTTTGGCAAGTATTTTTTGAGTATTTAAGACAAATTACTATATTCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTTGGCAAGTATTTTTTGAGTATTTAAGACAAATTACTATATTCT  647

seq1  TTTCTTTTTTGACTGGTTCTTTGTGTGGTTTAGGTATCAGTGTAAACGTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTTTGACTGGTTCTTTGTGTGGTTTAGGTATCAGTGTAAACGTG  697

seq1  GCCTTCGAAAAATTAGGCAGTTTCTTATATGAACAAACAGAAACTGTAAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCGAAAAATTAGGCAGTTTCTTATATGAACAAACAGAAACTGTAAC  747

seq1  ACCATTTCAAGAGACTGCGTGGGTCTAAAGCAGAGAGGATCCAGCACTAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTTCAAGAGACTGCGTGGGTCTAAAGCAGAGAGGATCCAGCACTAA  797

seq1  GAGGCGAACTTGTCAGGAGTACTCACACCTATTTCCCATAGGCTATCTCC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCGAACTTGTCAGGAGTACTCACACCTATTTCCCATAGGCTATCTCC  847

seq1  AGCAGACATGCACTACAATATAAAAATTAATTGTCTGCAGGAGACAGAGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGACATGCACTACAATATAAAAATTAATTGTCTGCAGGAGACAGAGA  897

seq1  GAGGAGGTGCGGAGTTTTACAGGTAGGTAGTGTGAAGGGTGTGGCAGGAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGGTGCGGAGTTTTACAGGTAGGTAGTGTGAAGGGTGTGGCAGGAG  947

seq1  ATGAGAAGGGAGAATGATCAGAATACACTTCTATATGAAAACAACATTAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAAGGGAGAATGATCAGAATACACTTCTATATGAAAACAACATTAA  997

seq1  ATGTACTAGGAAGCAAAAGGGTCCCTGGAACACAATTGAATTC  1042
      |||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACTAGGAAGCAAAAGGGTCCCTGGAACACAATTGAATTC  1040


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