BAC Information

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BAC

Clone NameB6Ng01-285B16
Chromosome14 (Build37)
Map Location 79,768,010 - 79,769,159
singlet/doubletsinglet
Overlap geneNarg1l
Upstream geneLOC219180, Akap11, Dgkh, LOC673649, 1300010F03Rik, LOC629709, LOC100043765, AU017455, 1190002H23Rik
Downstream geneMtrf1, Kbtbd7, EG432879, Wbp4, Elf1, LOC668560, Sugt1, Lect1, Pcdh8, EG629734, Olfm4, LOC672828
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-285B16.bB6Ng01-285B16.g
ACCGA083638GA083639
length1,1601,193
definitionB6Ng01-285B16.b B6Ng01-285B16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttatggacattaggggacatgtcacctggaacattgctttcta
tgtgacaaggtggcgctgacttgggttacgtctgcttgcagagtcattgc
tctgaggggctttctgttcagatcttgaagagttgactcaatcaaccaca
gtttgcttttatctctaggtaagaagtttcgagaactcatggataagttc
ctgagaccaaactttagcaaagggtgtccacctctgttcactactttgaa
atccttgtattgtgatacagaaaaggtaagtttggtttttatgcagattt
gctattattatagcaagatttttataaactatgttatgatttaattattt
tctctattgtgccatttccctttttatcttctatactaaatagttgtacc
tgacatatcagttctgtataccgaaagtatatgcatatggtataagtata
ccgaaagtatatgcatatggtataagtgataacaaaggaattgcgcatgg
tgctgtaaagtgtagagaaaagtaaagtattttcaaaagactgagatagg
ctgagcacacctttaaccccagcactagggaggcagaggtaggcagattt
cttgagttcagggccatcctggtctatagagcaagctttgggtcagccag
tactactgcagaaagaaatcctgtcccgaaaaaccaaaaaaaagaaaagt
gatacacagctggatgtgatggaccacgtttgtaatcctagtccttgaaa
ggctgaggcagaagaactggcaagactatgaagctagctcgactttcaca
gttaattccaggtctgtctgggctacatagtgagacctgctccccccccc
cccaaaaaaaaaaacaaaacaaaacaaacatattattagaactttatatt
tagctattcataagtcatatatttcacagtatagggttgttttggttttt
ttttttttttttaattttccccagtttgtaatcatatcaaagttgggcat
ggatcgctgaaatttccacagtgaaataccatttaggtcaggtgaatggg
aacagctagttttaggtcattaggttggagtccttaatagtgcagtagtg
gtagcgttggggaggctcgctcaatcagcactgtagagcttgctatgtta
gcgtacgtgc
gaattctcacctgaggaataccgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactatggaaatcagtctggcggttcctca
gaaaactggatatagttctaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taagatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtgaacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagataa
aaggatggaccatgtagacactagcatatccggggatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcaagattatgctgaaa
ggaccctgatatagctgtctcttgtcagagtatgcctgggcctagcaaac
atagaagtggatgctcacagtcggctattggatggatcacatgggccccc
aatgaaggaggtagagaaagtaccaagaagctaaagggatctgcaaccct
atagtggaacacattatgaactaacaagtaccccggagcttcttgactct
agctgcattattgcatcaaaagatggccttagtcgtccatcacctggaaa
gaagaggtccattgggaacacgcaaacctttaattgccagttacaggacg
cccaggtccatataaacggggactgtgtgtggtggatttatag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_79768010_79769159
seq2: B6Ng01-285B16.b_48_1207 (reverse)

seq1  GCACGTACGCT-ACATAGCAAGCTCTACAGTGCTGAATGAGCGAGCCT-C  48
      ||||||||||| |||||||||||||||||||||||| ||||||||||| |
seq2  GCACGTACGCTAACATAGCAAGCTCTACAGTGCTGATTGAGCGAGCCTCC  50

seq1  CCAACGCCTAACACTACTGCACCTATT-AGGACT-CAACCT-ATTAACTA  95
      |||||| ||| |||||||||| ||||| |||||| |||||| || | |||
seq2  CCAACG-CTACCACTACTGCA-CTATTAAGGACTCCAACCTAATGACCTA  98

seq1  AAACTAGCTGTTCCCATTCCACTGACCT-AATGGTATTTCACTGTG--AA  142
      |||||||||||||||||||  ||||||| |||||||||||||||||  ||
seq2  AAACTAGCTGTTCCCATTCACCTGACCTAAATGGTATTTCACTGTGGAAA  148

seq1  ATTCAGCGATCCATG-CCAACTTTGATATGATTACAAACTGGGGAAAATT  191
       |||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTTCAGCGATCCATGCCCAACTTTGATATGATTACAAACTGGGGAAAATT  198

seq1  --AAAAAAAAAAAAAAACCAAAACAACCCTATACTGTGAAATATATGACT  239
        ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAAACCAAAACAACCCTATACTGTGAAATATATGACT  248

seq1  TATGAATAGCTAAATATAAAGTTCTAATAATATGTTTGTTTTGTTTTG-T  288
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TATGAATAGCTAAATATAAAGTTCTAATAATATGTTTGTTTTGTTTTGTT  298

seq1  TTTTTTTTTGGGGGGGGGGGGAGCAGGTCTCACTATGTAGCCCAGACAGA  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTGGGGGGGGGGGGAGCAGGTCTCACTATGTAGCCCAGACAGA  348

seq1  CCTGGAATTAACTGTGAAAGTCGAGCTAGCTTCATAGTCTTGCCAGTTCT  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAATTAACTGTGAAAGTCGAGCTAGCTTCATAGTCTTGCCAGTTCT  398

seq1  TCTGCCTCAGCCTTTCAAGGACTAGGATTACAAACGTGGTCCATCACATC  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCAGCCTTTCAAGGACTAGGATTACAAACGTGGTCCATCACATC  448

seq1  CAGCTGTGTATCACTTTTCTTTTTTTTGGTTTTTCGGGACAGGATTTCTT  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGTGTATCACTTTTCTTTTTTTTGGTTTTTCGGGACAGGATTTCTT  498

seq1  TCTGCAGTAGTACTGGCTGACCCAAAGCTTGCTCTATAGACCAGGATGGC  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAGTAGTACTGGCTGACCCAAAGCTTGCTCTATAGACCAGGATGGC  548

seq1  CCTGAACTCAAGAAATCTGCCTACCTCTGCCTCCCTAGTGCTGGGGTTAA  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAACTCAAGAAATCTGCCTACCTCTGCCTCCCTAGTGCTGGGGTTAA  598

seq1  AGGTGTGCTCAGCCTATCTCAGTCTTTTGAAAATACTTTACTTTTCTCTA  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTGCTCAGCCTATCTCAGTCTTTTGAAAATACTTTACTTTTCTCTA  648

seq1  CACTTTACAGCACCATGCGCAATTCCTTTGTTATCACTTATACCATATGC  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTACAGCACCATGCGCAATTCCTTTGTTATCACTTATACCATATGC  698

seq1  ATATACTTTCGGTATACTTATACCATATGCATATACTTTCGGTATACAGA  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACTTTCGGTATACTTATACCATATGCATATACTTTCGGTATACAGA  748

seq1  ACTGATATGTCAGGTACAACTATTTAGTATAGAAGATAAAAAGGGAAATG  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATATGTCAGGTACAACTATTTAGTATAGAAGATAAAAAGGGAAATG  798

seq1  GCACAATAGAGAAAATAATTAAATCATAACATAGTTTATAAAAATCTTGC  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAATAGAGAAAATAATTAAATCATAACATAGTTTATAAAAATCTTGC  848

seq1  TATAATAATAGCAAATCTGCATAAAAACCAAACTTACCTTTTCTGTATCA  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATAATAGCAAATCTGCATAAAAACCAAACTTACCTTTTCTGTATCA  898

seq1  CAATACAAGGATTTCAAAGTAGTGAACAGAGGTGGACACCCTTTGCTAAA  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACAAGGATTTCAAAGTAGTGAACAGAGGTGGACACCCTTTGCTAAA  948

seq1  GTTTGGTCTCAGGAACTTATCCATGAGTTCTCGAAACTTCTTACCTAGAG  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGTCTCAGGAACTTATCCATGAGTTCTCGAAACTTCTTACCTAGAG  998

seq1  ATAAAAGCAAACTGTGGTTGATTGAGTCAACTCTTCAAGATCTGAACAGA  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGCAAACTGTGGTTGATTGAGTCAACTCTTCAAGATCTGAACAGA  1048

seq1  AAGCCCCTCAGAGCAATGACTCTGCAAGCAGACGTAACCCAAGTCAGCGC  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCCTCAGAGCAATGACTCTGCAAGCAGACGTAACCCAAGTCAGCGC  1098

seq1  CACCTTGTCACATAGAAAGCAATGTTCCAGGTGACATGTCCCCTAATGTC  1138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTGTCACATAGAAAGCAATGTTCCAGGTGACATGTCCCCTAATGTC  1148

seq1  CATAAGGAATTC  1150
      ||||||||||||
seq2  CATAAGGAATTC  1160