BAC Information

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BAC

Clone NameB6Ng01-285L18
Chromosome14 (Build37)
Map Location 97,862,333 - 97,997,472
singlet/doubletdoublet
Overlap genenone
Upstream geneKlhl1, LOC100043366, LOC668654
Downstream geneEG668659, Dach1, LOC635593
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-285L18.bB6Ng01-285L18.g
ACCGA084107GA084108
length1,2021,057
definitionB6Ng01-285L18.b B6Ng01-285L18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,862,333 - 97,863,514)(97,996,407 - 97,997,472)
sequence
gaattctatatcaagagagtgaaacaatgtctcagccaagagttcaaggg
aagataggctccatagcagcctggccttcaaaaagaagaatcaacacatt
tctttcttatatttactgtaaaatgttataatatatgatatggtatggta
tagatgaatagaaaaacaaaataataaaaatgtttacattatatttctaa
ataatataaggacaaagtcatagggtagtttgtatgagtgactcatattt
ttctttattttgaatctatgtaaaataattgacacaaactgtaccatcta
gttctcagagatagtaatgatgtgatttctacaaatacagaggagtcttt
caggttgaggggcaaaaaattttttttcctatgtgcccatgtgtgttcat
gctttggagaaaggaaaataaaatgtactatgtatgtgcttcaatgtatc
tccttataataatattttttctaaattttatttttgattatttgtttact
catttgtgagattgcagtctagtatttaattacaatatttgaaataaaaa
tattttaattcctttgttgtcctccctcccccaagcccttttatataact
ctcattcttcaaattcatggcctatttttattcattaatttttttgcatg
tatgtatttgaatgcacacatatacagaaatatttacatattctaaaata
taaactgctgagtcaatataatgttatttatatgggtattttgagggctt
gccatttgcacttgacagcatactcgaatgctctttcctggggagtattg
ctttaatttacccattctaattcagtatttatttacctgaaatagagaca
atataaaaatcatgaaatatttaacaaatgtgttaattggtatatgttgc
cttttctatatatgtagttgagtagggaactcaaataaatgggaggttgt
aaaataaatttgcttgtaatcatcatccaatcgacagagttcctcattgt
ttatcataatctatatcttttggaaatcgtcaataattctacatttcctg
ttacaaccaaaattttaaaaacatattacaatattttagtaacttaatta
tccttaatgaattttggaataacttaataaactagtaagaaaagcttacc
tggttgctttgaattcacaaagtatgtgttggacattcatttttaggaac
at

gaattctatttaactcagaacaacccctagcgttctctaaacctaggaaa
gggagagcattgtccatagttaatgtgtccagagactaaactgttaactt
ctgttttagccagcagatccctgctttattgttctctgtgtactaataat
ttctgattgtgtaactgccttccccctggaactgctataaaaatagatac
atatctttaaaagtttgtcttaaggaagtagggttcaagtaaacaacaca
atagcttgtcttaaagctaattggagtgctcaaatattagagaaacaaga
gaaaggatagacctgaatagttactgctccttttggtggttcaaatactg
ttagactctcttaaaatataaagtaatatagttaatttgtaacattccta
attataagtggttagatttttatgcacatctttctatttacccttcaagt
gcctctctgcacactaacttgagggacaacacttttatgtacaaatgaat
cacaagtaagctagtaaacacagaacgaattgaagaggaattgaaatata
caagatatatagataatggcacatttcaattgagagttagcaatagttat
cttccaagcaaagtgtaaagcttgattgaacaaaggataaagttaatact
atctaataagaacagaccattatagatcagtgaaactgcaaaacagaacg
ataagacaaagggcaagccacattatctaaattaacatttttccagcatg
aaaaagaagggacactgtaggaaaacaagagctaaatagtacggcctgca
tttagtcaacctgaagtaattattaatttatggttgtcggtgattttaat
gaaaagaaagctgcgagggaagaattgaaagagataatgtgccgtgaaat
tgagtttcatttatttgggggccaccttttccttttttgttgttgttaaa
tggaagaaagttaatgcagatgtccacattaaatttcactaggattatgt
acacagtaacggtaatcattattattgaggagagttaatgcaaagaaatc
gaggcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_97862333_97863514
seq2: B6Ng01-285L18.b_51_1252

seq1  GAATTCTATATCAAGAGAGTGAAACAATGTCTCAGCCAAGAGTTCAAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATATCAAGAGAGTGAAACAATGTCTCAGCCAAGAGTTCAAGGG  50

seq1  AAGATAGGCTCCATAGCAGCCTGGCCTTCAAAAAGAAGAATCAACACATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAGGCTCCATAGCAGCCTGGCCTTCAAAAAGAAGAATCAACACATT  100

seq1  TCTTTCTTATATTTACTGTAAAATGTTATAATATATGATATGGTATGGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTATATTTACTGTAAAATGTTATAATATATGATATGGTATGGTA  150

seq1  TAGATGAATAGAAAAACAAAATAATAAAAATGTTTACATTATATTTCTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGAATAGAAAAACAAAATAATAAAAATGTTTACATTATATTTCTAA  200

seq1  ATAATATAAGGACAAAGTCATAGGGTAGTTTGTATGAGTGACTCATATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATAAGGACAAAGTCATAGGGTAGTTTGTATGAGTGACTCATATTT  250

seq1  TTCTTTATTTTGAATCTATGTAAAATAATTGACACAAACTGTACCATCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTATTTTGAATCTATGTAAAATAATTGACACAAACTGTACCATCTA  300

seq1  GTTCTCAGAGATAGTAATGATGTGATTTCTACAAATACAGAGGAGTCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCAGAGATAGTAATGATGTGATTTCTACAAATACAGAGGAGTCTTT  350

seq1  CAGGTTGAGGGGCAAAAAATTTTTTTTCCTATGTGCCCATGTGTGTTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTGAGGGGCAAAAAATTTTTTTTCCTATGTGCCCATGTGTGTTCAT  400

seq1  GCTTTGGAGAAAGGAAAATAAAATGTACTATGTATGTGCTTCAATGTATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGGAGAAAGGAAAATAAAATGTACTATGTATGTGCTTCAATGTATC  450

seq1  TCCTTATAATAATATTTTTTCTAAATTTTATTTTTGATTATTTGTTTACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTATAATAATATTTTTTCTAAATTTTATTTTTGATTATTTGTTTACT  500

seq1  CATTTGTGAGATTGCAGTCTAGTATTTAATTACAATATTTGAAATAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTGAGATTGCAGTCTAGTATTTAATTACAATATTTGAAATAAAAA  550

seq1  TATTTTAATTCCTTTGTTGTCCTCCCTCCCCCAAGCCCTTTTATATAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTAATTCCTTTGTTGTCCTCCCTCCCCCAAGCCCTTTTATATAACT  600

seq1  CTCATTCTTCAAATTCATGGCCTATTTTTATTCATTAATTTTTTTGCATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTCTTCAAATTCATGGCCTATTTTTATTCATTAATTTTTTTGCATG  650

seq1  TATGTATTTGAATGCACACATATACAGAAATATTTACATATTCTAAAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATTTGAATGCACACATATACAGAAATATTTACATATTCTAAAATA  700

seq1  TAAACTGCTGAGTCAATATAATGTTATTTATATGGGTATTTTGAGGGCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTGCTGAGTCAATATAATGTTATTTATATGGGTATTTTGAGGGCTT  750

seq1  GCCATTTGCACTTGACAGCATACTCGAATGCTCTTTCCTGGGGAGTATTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTTGCACTTGACAGCATACTCGAATGCTCTTTCCTGGGGAGTATTG  800

seq1  CTTTAATTTACCCATTCTAATTCAGTATTTATTTACCTGAAATAGAGACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATTTACCCATTCTAATTCAGTATTTATTTACCTGAAATAGAGACA  850

seq1  ATATAAAAATCATGAAATA-TTAACAAATGTGTTAATTGGTATATGTTGC  899
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ATATAAAAATCATGAAATATTTAACAAATGTGTTAATTGGTATATGTTGC  900

seq1  C-TTTCTATATATGTAGTTGAGTA-GGAACTCAAATAAAT-GGAGGTTGT  946
      | |||||||||||||||||||||| ||||||||||||||| |||||||||
seq2  CTTTTCTATATATGTAGTTGAGTAGGGAACTCAAATAAATGGGAGGTTGT  950

seq1  -AAATAAATTTGCTTGTAATCATCATCCAATCGACAGAGTTCCTCATTGT  995
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAATTTGCTTGTAATCATCATCCAATCGACAGAGTTCCTCATTGT  1000

seq1  TTATCATAATCTATATC-TTTGGAAATCGTCAATAATTCTACATTT-CTG  1043
      ||||||||||||||||| |||||||||||||||||||||||||||| |||
seq2  TTATCATAATCTATATCTTTTGGAAATCGTCAATAATTCTACATTTCCTG  1050

seq1  TTACAA-CAAAATTTT-AAAACATA-TACAATA-TTTATTAACTTAATTA  1089
      |||||| ||||||||| |||||||| ||||||| |||| |||||||||||
seq2  TTACAACCAAAATTTTAAAAACATATTACAATATTTTAGTAACTTAATTA  1100

seq1  TC--TTATGAAATTTTGATTA--CTAAT-AACTAGGTAGAAAAGC-TAC-  1132
      ||  | ||||| ||| || ||   |||| ||||||  |||||||| ||| 
seq2  TCCTTAATGAATTTTGGAATAACTTAATAAACTAGTAAGAAAAGCTTACC  1150

seq1  -TGTTGCTTTGAAATTCAC-AGGTATGTGGTGGACA-TCATGTTTAGGAA  1179
        ||||||||| ||||||| | ||||||| |||||| |||| ||||||||
seq2  TGGTTGCTTTG-AATTCACAAAGTATGTGTTGGACATTCATTTTTAGGAA  1199

seq1  CAT  1182
      |||
seq2  CAT  1202


seq1: chr14_97996407_97997472
seq2: B6Ng01-285L18.g_67_1123 (reverse)

seq1  AGGCTTCGATTTCTTTTGCATTAACTCTCCTCAAATATAATGATTACCGT  50
      |||| |||||||| ||||||||||||||||||||  ||||||||||||||
seq2  AGGCCTCGATTTC-TTTGCATTAACTCTCCTCAATAATAATGATTACCGT  49

seq1  TTAACTTGGTGGTTACATAATCCTAGTGAAATTTTAATGTGGACATCTTG  100
      |  |||  |||  |||||||||||||||||| ||||||||||||||| ||
seq2  T--ACT--GTG--TACATAATCCTAGTGAAA-TTTAATGTGGACATC-TG  91

seq1  CATTAACTTTCTTCCCTTTAACAACAACAAAAAAGGAAAAGGTGGCCCCC  150
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CATTAACTTTCTTCCATTTAACAACAACAAAAAAGGAAAAGGTGGCCCCC  141

seq1  AAATAAATGAAACTCAATTTCACGGCACATTATCTCTTTCAATTCTTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATGAAACTCAATTTCACGGCACATTATCTCTTTCAATTCTTCCC  191

seq1  TCGCAGCTTTCTTTTCATTAAAATCACCGACAACCATAAATTAATAATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCAGCTTTCTTTTCATTAAAATCACCGACAACCATAAATTAATAATTA  241

seq1  CTTCAGGTTGACTAAATGCAGGCCGTACTATTTAGCTCTTGTTTTCCTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGGTTGACTAAATGCAGGCCGTACTATTTAGCTCTTGTTTTCCTAC  291

seq1  AGTGTCCCTTCTTTTTCATGCTGGAAAAATGTTAATTTAGATAATGTGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCCCTTCTTTTTCATGCTGGAAAAATGTTAATTTAGATAATGTGGC  341

seq1  TTGCCCTTTGTCTTATCGTTCTGTTTTGCAGTTTCACTGATCTATAATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCTTTGTCTTATCGTTCTGTTTTGCAGTTTCACTGATCTATAATGG  391

seq1  TCTGTTCTTATTAGATAGTATTAACTTTATCCTTTGTTCAATCAAGCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTCTTATTAGATAGTATTAACTTTATCCTTTGTTCAATCAAGCTTT  441

seq1  ACACTTTGCTTGGAAGATAACTATTGCTAACTCTCAATTGAAATGTGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTTGCTTGGAAGATAACTATTGCTAACTCTCAATTGAAATGTGCCA  491

seq1  TTATCTATATATCTTGTATATTTCAATTCCTCTTCAATTCGTTCTGTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTATATATCTTGTATATTTCAATTCCTCTTCAATTCGTTCTGTGTT  541

seq1  TACTAGCTTACTTGTGATTCATTTGTACATAAAAGTGTTGTCCCTCAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGCTTACTTGTGATTCATTTGTACATAAAAGTGTTGTCCCTCAAGT  591

seq1  TAGTGTGCAGAGAGGCACTTGAAGGGTAAATAGAAAGATGTGCATAAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTGCAGAGAGGCACTTGAAGGGTAAATAGAAAGATGTGCATAAAAA  641

seq1  TCTAACCACTTATAATTAGGAATGTTACAAATTAACTATATTACTTTATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACCACTTATAATTAGGAATGTTACAAATTAACTATATTACTTTATA  691

seq1  TTTTAAGAGAGTCTAACAGTATTTGAACCACCAAAAGGAGCAGTAACTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGAGAGTCTAACAGTATTTGAACCACCAAAAGGAGCAGTAACTAT  741

seq1  TCAGGTCTATCCTTTCTCTTGTTTCTCTAATATTTGAGCACTCCAATTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTCTATCCTTTCTCTTGTTTCTCTAATATTTGAGCACTCCAATTAG  791

seq1  CTTTAAGACAAGCTATTGTGTTGTTTACTTGAACCCTACTTCCTTAAGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAGACAAGCTATTGTGTTGTTTACTTGAACCCTACTTCCTTAAGAC  841

seq1  AAACTTTTAAAGATATGTATCTATTTTTATAGCAGTTCCAGGGGGAAGGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTTAAAGATATGTATCTATTTTTATAGCAGTTCCAGGGGGAAGGC  891

seq1  AGTTACACAATCAGAAATTATTAGTACACAGAGAACAATAAAGCAGGGAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACACAATCAGAAATTATTAGTACACAGAGAACAATAAAGCAGGGAT  941

seq1  CTGCTGGCTAAAACAGAAGTTAACAGTTTAGTCTCTGGACACATTAACTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGGCTAAAACAGAAGTTAACAGTTTAGTCTCTGGACACATTAACTA  991

seq1  TGGACAATGCTCTCCCTTTCCTAGGTTTAGAGAACGCTAGGGGTTGTTCT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAATGCTCTCCCTTTCCTAGGTTTAGAGAACGCTAGGGGTTGTTCT  1041

seq1  GAGTTAAATAGAATTC  1066
      ||||||||||||||||
seq2  GAGTTAAATAGAATTC  1057


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