BAC Information

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BAC

Clone NameB6Ng01-286E11
Chromosome14 (Build37)
Map Location 21,685,850 - 21,824,147
singlet/doubletdoublet
Overlap geneVcl
Upstream geneGng2, 1810063B07Rik, Kcnk5, LOC100039106, Kcnk16, Nudt13, Ecd, AA536717, Dnajc9, Mrps16, Ttc18, Anxa7, Zmynd17, Ppp3cb, Usp54, Myoz1, Synpo2l, Sec24c, Fut11, Chchd1, 2310021P13Rik, Ndst2, Camk2g, Plau, EG620119
Downstream geneAp3m1, Adk, Myst4, EG435391, Dusp13, Samd8, Vdac2, Comtd1, Zfp503
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-286E11.bB6Ng01-286E11.g
ACCGA084516GA084517
length5071,108
definitionB6Ng01-286E11.b B6Ng01-286E11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(21,685,850 - 21,686,362)(21,823,046 - 21,824,147)
sequence
tttgttactgagcacttgaattcctgagagattcaaatcctgtagacctt
tggttttgagtcttagggtcaatttttaactggttgctgtctgtgtctct
gatttaacttctagttgctattttattttaattgggtatttcaacaagct
gtgatcttatcccagaccatgaaagctatgaagatctagactcagtcatc
cccactggagtttcccatcttgcccacagtcttaactctgagaacagaga
caagatgacccttgtacctaaaatcttagcactcttagaaggatccaccc
ttctccctacatccaaaactgcactgttagagagctaaattcttctaaag
agcctgtttcctaagtgtccatgttagaatgcagagcagagcagagcaga
gcagagcagagcagagcagagcagagcagagcagagcagaaccattcgcc
caagacatcccggaaacagaagagaattcctgtgctccttgctttctctc
gcctcac
gaattcacagtctctgtctttttgctttctgagccagcaatgccctcgtc
agaagattctaatgaatctcttactttgggaggataaaaataggcatttt
tctcacagacaaacagaaatagaacatataagttaagtggaagaaatgga
atattcccagatgtttgactttggttatccttggaaaatagtgctgcagg
actgtggtagaaaagagccacttctttcccatcaatccctctgtaacttt
gctgagggcaggttgagaagttctggcaaggggagtgcagccactatact
acacccctgaccaacattggccctcctctagctctcagaaggctatcctc
atgaacaaaggaactattctggagagataaacatggagcagtgaaggatg
gcaagggcaccaacctcagacaccagatgggccagccagaccaccctcct
cacatcctactgtagcctcctcacatcctactgtagcctcctcacatcct
actgtagcctcctcacatcctactgtagcctcctcacatcctactgtagc
ctcctcacatcctactgtagcctcctcacatcctactgtagcctcctcac
atcctactgtagcctcctcacatcctattgtagcctcctcaattcctact
gtagaacgttctaggaaatggtgctttggtttgctttggtttgctttggc
ttggtttcttcaaacagggtctcatatcaaattcatgatggaaccagagg
agaacttgaatttctgatcttgtctctacttcccagtttccgggattata
gatatcttcctccatgccttattttaggaaatgcttggtgaccaaaccca
gcccttacacaagaactctaccgattaagctgtattccccagcccatggt
gctgttgttgatgtgatttttaaagagagcaatattatttgtcagaacaa
aggaataacttcttttctatataatcaaaggtagtgcgatgaaagccttt
agagagaagctgtggcaaggattgttatttacaggacatcattccaggaa
tgtattttaagattcctttatgttaattgcttactcaagaaattagcact
gctgggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_21685850_21686362
seq2: B6Ng01-286E11.b_44_556

seq1  GAATTCTTTGTTACTGAGCACTTGAATTCCTGAGAGATTCAAATCCTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTACTGAGCACTTGAATTCCTGAGAGATTCAAATCCTGTA  50

seq1  GACCTTTGGTTTTGAGTCTTAGGGTCAATTTTTAACTGGTTGCTGTCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTTGGTTTTGAGTCTTAGGGTCAATTTTTAACTGGTTGCTGTCTGT  100

seq1  GTCTCTGATTTAACTTCTAGTTGCTATTTTATTTTAATTGGGTATTTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTGATTTAACTTCTAGTTGCTATTTTATTTTAATTGGGTATTTCAA  150

seq1  CAAGCTGTGATCTTATCCCAGACCATGAAAGCTATGAAGATCTAGACTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTGTGATCTTATCCCAGACCATGAAAGCTATGAAGATCTAGACTCA  200

seq1  GTCATCCCCACTGGAGTTTCCCATCTTGCCCACAGTCTTAACTCTGAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCCCCACTGGAGTTTCCCATCTTGCCCACAGTCTTAACTCTGAGAA  250

seq1  CAGAGACAAGATGACCCTTGTACCTAAAATCTTAGCACTCTTAGAAGGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGACAAGATGACCCTTGTACCTAAAATCTTAGCACTCTTAGAAGGAT  300

seq1  CCACCCTTCTCCCTACATCCAAAACTGCACTGTTAGAGAGCTAAATTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCTTCTCCCTACATCCAAAACTGCACTGTTAGAGAGCTAAATTCTT  350

seq1  CTAAAGAGCCTGTTTCCTAAGTGTCCATGTTAGAATGCAGAGCAGAGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGAGCCTGTTTCCTAAGTGTCCATGTTAGAATGCAGAGCAGAGCAG  400

seq1  AGCAGAGCAGAGCAGAGCAGAGCAGAGCAGAGCAGAGCAGAGCAGAACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGCAGAGCAGAGCAGAGCAGAGCAGAGCAGAGCAGAGCAGAACCA  450

seq1  TTCGCCCAAGACATCCCGGAAACAGAAGAGAATTCCTGTGCTCCAGGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||  ||||
seq2  TTCGCCCAAGACATCCCGGAAACAGAAGAGAATTCCTGTGCTCCTTGCTT  500

seq1  TCTCTCTCCTCAC  513
      |||||| ||||||
seq2  TCTCTCGCCTCAC  513

seq1: chr14_21823046_21824147
seq2: B6Ng01-286E11.g_69_1176 (reverse)

seq1  TTCCCAGCAGTGCT-ATTTCTTGAGT-AGCAATT-ACATAAAGGATTCTT  47
      |||||||||||||| ||||||||||| ||||||| |||||||||| ||||
seq2  TTCCCAGCAGTGCTAATTTCTTGAGTAAGCAATTAACATAAAGGAATCTT  50

seq1  AAATTACATTTCCTGG-ATGATTGTTCCTGT-AATAAC-ATCCTTGCCAC  94
      ||| |||| ||||||| |||||   |||||| |||||| |||||||||||
seq2  AAAATACA-TTCCTGGAATGAT--GTCCTGTAAATAACAATCCTTGCCAC  97

seq1  AGCTTCCTCTCTTAAAGGCTTTCATCGCACCTACTTTGATTATATAGAAA  144
      ||||| ||||| ||||||||||||||||||   |||||||||||||||||
seq2  AGCTT-CTCTC-TAAAGGCTTTCATCGCACTACCTTTGATTATATAGAAA  145

seq1  AG-AGTTATTCCTTTGTTCTGACAAAT-ATATTGCTCTCTTTAAAAATCA  192
      || |||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AGAAGTTATTCCTTTGTTCTGACAAATAATATTGCTCTCTTTAAAAATCA  195

seq1  CATCAACAACAGCACCATGGGCTGGGG-ATACAGCTTAATCGGTAGAGTT  241
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CATCAACAACAGCACCATGGGCTGGGGAATACAGCTTAATCGGTAGAGTT  245

seq1  CTTGTGT-AGGGCTGGGTTTGGTCACC-AGCATTTCCTAAAATAAGGCAT  289
      ||||||| ||||||||||||||||||| ||||||||||||||||||||||
seq2  CTTGTGTAAGGGCTGGGTTTGGTCACCAAGCATTTCCTAAAATAAGGCAT  295

seq1  GGAGGAAGATATCTATAATCCCGGAAACTGGGAAGTAGAGACAAGATCAG  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAAGATATCTATAATCCCGGAAACTGGGAAGTAGAGACAAGATCAG  345

seq1  AAATTCAAGTTCTCCTCTGGTTCCATCATGAATTTGATATGAGACCCTGT  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCAAGTTCTCCTCTGGTTCCATCATGAATTTGATATGAGACCCTGT  395

seq1  TTGAAGAAACCAAGCCAAAGCAAACCAAAGCAAACCAAAGCACCATTTCC  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGAAACCAAGCCAAAGCAAACCAAAGCAAACCAAAGCACCATTTCC  445

seq1  TAGAACGTTCTACAGTAGGAATTGAGGAGGCTACAATAGGATGTGAGGAG  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACGTTCTACAGTAGGAATTGAGGAGGCTACAATAGGATGTGAGGAG  495

seq1  GCTACAGTAGGATGTGAGGAGGCTACAGTAGGATGTGAGGAGGCTACAGT  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACAGTAGGATGTGAGGAGGCTACAGTAGGATGTGAGGAGGCTACAGT  545

seq1  AGGATGTGAGGAGGCTACAGTAGGATGTGAGGAGGCTACAGTAGGATGTG  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGTGAGGAGGCTACAGTAGGATGTGAGGAGGCTACAGTAGGATGTG  595

seq1  AGGAGGCTACAGTAGGATGTGAGGAGGCTACAGTAGGATGTGAGGAGGCT  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGCTACAGTAGGATGTGAGGAGGCTACAGTAGGATGTGAGGAGGCT  645

seq1  ACAGTAGGATGTGAGGAGGGTGGTCTGGCTGGCCCATCTGGTGTCTGAGG  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAGGATGTGAGGAGGGTGGTCTGGCTGGCCCATCTGGTGTCTGAGG  695

seq1  TTGGTGCCCTTGCCATCCTTCACTGCTCCATGTTTATCTCTCCAGAATAG  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGCCCTTGCCATCCTTCACTGCTCCATGTTTATCTCTCCAGAATAG  745

seq1  TTCCTTTGTTCATGAGGATAGCCTTCTGAGAGCTAGAGGAGGGCCAATGT  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTGTTCATGAGGATAGCCTTCTGAGAGCTAGAGGAGGGCCAATGT  795

seq1  TGGTCAGGGGTGTAGTATAGTGGCTGCACTCCCCTTGCCAGAACTTCTCA  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCAGGGGTGTAGTATAGTGGCTGCACTCCCCTTGCCAGAACTTCTCA  845

seq1  ACCTGCCCTCAGCAAAGTTACAGAGGGATTGATGGGAAAGAAGTGGCTCT  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCCCTCAGCAAAGTTACAGAGGGATTGATGGGAAAGAAGTGGCTCT  895

seq1  TTTCTACCACAGTCCTGCAGCACTATTTTCCAAGGATAACCAAAGTCAAA  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTACCACAGTCCTGCAGCACTATTTTCCAAGGATAACCAAAGTCAAA  945

seq1  CATCTGGGAATATTCCATTTCTTCCACTTAACTTATATGTTCTATTTCTG  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGGGAATATTCCATTTCTTCCACTTAACTTATATGTTCTATTTCTG  995

seq1  TTTGTCTGTGAGAAAAATGCCTATTTTTATCCTCCCAAAGTAAGAGATTC  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTGTGAGAAAAATGCCTATTTTTATCCTCCCAAAGTAAGAGATTC  1045

seq1  ATTAGAATCTTCTGACGAGGGCATTGCTGGCTCAGAAAGCAAAAAGACAG  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAATCTTCTGACGAGGGCATTGCTGGCTCAGAAAGCAAAAAGACAG  1095

seq1  AGACTGTGAATTC  1102
      |||||||||||||
seq2  AGACTGTGAATTC  1108