BAC Information

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BAC

Clone NameB6Ng01-287H05
Chromosome14 (Build37)
Map Location 99,633,059 - 99,776,190
singlet/doubletdoublet
Overlap geneD14Ertd581e, LOC100043395, LOC100043397, Klf5, LOC100043400
Upstream geneLOC635593, LOC619716, LOC100043787, 2410129H14Rik, 6720463M24Rik, Dis3
Downstream geneLOC100043789, LOC668671, LOC668672, EG546623, Klf12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-287H05.bB6Ng01-287H05.g
ACCGA085372GA085373
length621317
definitionB6Ng01-287H05.b B6Ng01-287H05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(99,633,059 - 99,633,679)(99,775,874 - 99,776,190)
sequence
gaattctgaagcatatgctgatactgttttctgacactttgccatataaa
agctatttgcctattgtttccctttgtaactgaagtcttagaatatggaa
agagtaacttttagagctggggtttctctattatacagccccagctgccc
tgaaactcagagatcatctgcctctacctccacctcccaagtgctggggt
taaagatgtttgccacaacccacctggaataagtaacttttaattaaatt
tacatgggcagggagggggacccagagctttgcacatgctaggccggtgg
cactgagctctggaaccaagaattaccttgaaccctcatcctcctgtctc
cacttcctcaggactatacaagagtaatggtacctgtaaatacagatact
cctagacttagagtgggttatgtttcagtagattcaccatatttttaaat
atgctaaacgaaaatacatttaaaacaatttaccaaacattcaaggtggc
aaactttgaatgttctaagaatacttatacaaaattatcaaacataaagc
ctgttctctattacagtattgattatctcatgccaggtgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtg

ttctttgaaaatacatttttttgacactgggtgtcatacagctcagaatg
gcttcaaactcactatgtaggtaaaaaaaatggctttaaacttctgatcc
tgctcccatctccaaagtgtatgcctctgagattacaagcatgtgtcaga
atgcctggttcatgcagtgctgggggcctgactctttaggaagcttggaa
tacgtgagatgctaatttgagagccaaaaaagaacataaacaggttctaa
gaaaagccctatgggggacggaggtgtgtgtgtgtgtgtgcgtgcgtgtg
tgtttgtgggtgtgggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_99633059_99633679
seq2: B6Ng01-287H05.b_46_666

seq1  GAATTCTGAAGCATATGCTGATACTGTTTTCTGACACTTTGCCATATAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAAGCATATGCTGATACTGTTTTCTGACACTTTGCCATATAAA  50

seq1  AGCTATTTGCCTATTGTTTCCCTTTGTAACTGAAGTCTTAGAATATGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATTTGCCTATTGTTTCCCTTTGTAACTGAAGTCTTAGAATATGGAA  100

seq1  AGAGTAACTTTTAGAGCTGGGGTTTCTCTATTATACAGCCCCAGCTGCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAACTTTTAGAGCTGGGGTTTCTCTATTATACAGCCCCAGCTGCCC  150

seq1  TGAAACTCAGAGATCATCTGCCTCTACCTCCACCTCCCAAGTGCTGGGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTCAGAGATCATCTGCCTCTACCTCCACCTCCCAAGTGCTGGGGT  200

seq1  TAAAGATGTTTGCCACAACCCACCTGGAATAAGTAACTTTTAATTAAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGATGTTTGCCACAACCCACCTGGAATAAGTAACTTTTAATTAAATT  250

seq1  TACATGGGCAGGGAGGGGGACCCAGAGCTTTGCACATGCTAGGCCGGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGGGCAGGGAGGGGGACCCAGAGCTTTGCACATGCTAGGCCGGTGG  300

seq1  CACTGAGCTCTGGAACCAAGAATTACCTTGAACCCTCATCCTCCTGTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAGCTCTGGAACCAAGAATTACCTTGAACCCTCATCCTCCTGTCTC  350

seq1  CACTTCCTCAGGACTATACAAGAGTAATGGTACCTGTAAATACAGATACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCCTCAGGACTATACAAGAGTAATGGTACCTGTAAATACAGATACT  400

seq1  CCTAGACTTAGAGTGGGTTATGTTTCAGTAGATTCACCATATTTTTAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGACTTAGAGTGGGTTATGTTTCAGTAGATTCACCATATTTTTAAAT  450

seq1  ATGCTAAACGAAAATACATTTAAAACAATTTACCAAACATTCAAGGTGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTAAACGAAAATACATTTAAAACAATTTACCAAACATTCAAGGTGGC  500

seq1  AAACTTTGAATGTTCTAAGAATACTTATACAAAATTATCAAACATAAAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTGAATGTTCTAAGAATACTTATACAAAATTATCAAACATAAAGC  550

seq1  CTGTTCTCTATTACAGTATTGATTATCTCATGCCAGGTGTGTGTGTGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCTCTATTACAGTATTGATTATCTCATGCCAGGTGTGTGTGTGTGT  600

seq1  GTGTGTGTGTGTGTGTGTGTG  621
      |||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTG  621


seq1: chr14_99775874_99776190
seq2: B6Ng01-287H05.g_73_389 (reverse)

seq1  ACCCACACCCACAAACACACACGCACGCACACACACACACACACCTCCGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACACCCACAAACACACACGCACGCACACACACACACACACCTCCGT  50

seq1  CCCCCATAGGGCTTTTCTTAGAACCTGTTTATGTTCTTTTTTGGCTCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCATAGGGCTTTTCTTAGAACCTGTTTATGTTCTTTTTTGGCTCTCA  100

seq1  AATTAGCATCTCACGTATTCCAAGCTTCCTAAAGAGTCAGGCCCCCAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGCATCTCACGTATTCCAAGCTTCCTAAAGAGTCAGGCCCCCAGCA  150

seq1  CTGCATGAACCAGGCATTCTGACACATGCTTGTAATCTCAGAGGCATACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATGAACCAGGCATTCTGACACATGCTTGTAATCTCAGAGGCATACA  200

seq1  CTTTGGAGATGGGAGCAGGATCAGAAGTTTAAAGCCATTTTTTTTACCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGAGATGGGAGCAGGATCAGAAGTTTAAAGCCATTTTTTTTACCTA  250

seq1  CATAGTGAGTTTGAAGCCATTCTGAGCTGTATGACACCCAGTGTCAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTGAGTTTGAAGCCATTCTGAGCTGTATGACACCCAGTGTCAAAAA  300

seq1  AATGTATTTTCAAAGAA  317
      |||||||||||||||||
seq2  AATGTATTTTCAAAGAA  317


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