BAC Information

Click to search

BAC

Clone NameB6Ng01-287I19
Chromosome14 (Build37)
Map Location 101,383,943 - 101,384,673
singlet/doubletsinglet
Overlap genenone
Upstream geneKlf12, LOC100043413, EG668683, EG668684
Downstream gene1700110M21Rik, LOC100043421, LOC382936, Tbc1d4, Commd6, Uchl3, Lmo7, LOC100043795, LOC545567
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-287I19.bB6Ng01-287I19.g
ACCGA085444GA085445
length1,162732
definitionB6Ng01-287I19.b B6Ng01-287I19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacttgaggaatactgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcagttgacaac
agatgctggtgaggatgtggaaaaagaggaacactcctccattgttggtg
ggattacaagcttgtacaaccagtctggaaatcagtctgtggttcttcag
aaaattggacatagtactaccagaggatcccacaatacttctccttggca
tatatccaaatgatgttcctactggtaagaaggacacatgctccactttg
ttcatagcagccttatttataatagccagaagctggaaagaacccagatg
cccctcaacagaagaatggatacagaaaatgtggtacatttttacaatgg
aatgctactcagttattaaaaagaatgaatttatgaaattcctaggcaaa
tggatggacctggagggcatcatcctgattgaggtaacccaattacgaaa
gaactcacccaatatgctctcactgataagtggatattagcccagaaaca
gaatacccaagatataagatacaatttgctaaacacatgaaactcaagaa
gaacaaagaccaaagtgtggacactttgccccttcttagaattgggaaca
aaacacctatggaaagagttacagagacacagtttagagctgagatgaaa
ggatggactatctagagactgccatatccggggacccatcccataatcag
cctccaaatgctgacaccattgcatacactagcaagattttgctgaaagg
acccagatatagttgtctcttgtgagactatgccggggcctagcaaacac
agaagtggatgctcacagtcagctattggatggatcacagagccccaata
gagaactagggaaagtaaccaggagctaaagggatctgcaaccctatagg
tggaacaacatatgaactaccagtaccccagagctcttgtcctctagctg
catatgtatcagaaagatgctagtggcatcagtggaaagagacgcccaat
gtcatgcacttatctgcctagtacagaatgcaaggccagaattgatgagt
gggtgggggaat
gaattctcttctcccagagtcctcctgctctctctctctctctctctcgc
tctctctctctctctcccagaagtaccaccttactttcctgcctttgctg
taggccatcatctttttattaaaatcaatcagaagacttgagagtaagca
ttgaaaagatatgatgcaggtgctacttaacaattggagtgacaatatca
aagtccagtctgttctcaactttctgatagcacagaaattagcatttgaa
taacacagagacaatcttcacactgtgcacgaaaagtctatccctagatc
tttcctctctaataaccttgtttgactgaaatcttatttaaatgtaagaa
ttatttatataatctggagaaaaaaatgcattgggagagaggtacatcaa
aaaaaaaaacctattttctctctttttttgagtggtaaaggttgttttgt
cttgttgggaaggttgtggagagggtccatgccagcgcactgtgctgctc
ggcatgcacattctatgaatcctttgtccttccgtccataggactttgat
gagaagaaaccttaaattttgttaaaatttaatttggaacatctttgtgc
tgacaaatcattgtgttctaatgaatttttcctcacttcatgatagaact
gcataattccttttatgtcttctgtatcttctatatttaaaagttctaag
ttctgaattaatttcctggaccatatgacttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_101383943_101384673
seq2: B6Ng01-287I19.g_68_799

seq1  GAATTCTCTTCTCCCAGAGTCCTCCTGCTCTCTCTCTCTCTCTCTCTCGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTCTCCCAGAGTCCTCCTGCTCTCTCTCTCTCTCTCTCTCGC  50

seq1  TCTCTCTCTCTCTCTCCCAGAAGTACCACCTTACTTTCCTGCCTTTGCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCCCAGAAGTACCACCTTACTTTCCTGCCTTTGCTG  100

seq1  TAGGCCATCATCTTTTTATTAAAATCAATCAGAAGACTTGAGAGTAAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCCATCATCTTTTTATTAAAATCAATCAGAAGACTTGAGAGTAAGCA  150

seq1  TTGAAAAGATATGATGCAGGTGCTACTTAACAATTGGAGTGACAATATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAAGATATGATGCAGGTGCTACTTAACAATTGGAGTGACAATATCA  200

seq1  AAGTCCAGTCTGTTCTCAACTTTCTGATAGCACAGAAATTAGCATTTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCAGTCTGTTCTCAACTTTCTGATAGCACAGAAATTAGCATTTGAA  250

seq1  TAACACAGAGACAATCTTCACACTGTGCACGAAAAGTCTATCCCTAGATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACAGAGACAATCTTCACACTGTGCACGAAAAGTCTATCCCTAGATC  300

seq1  TTTCCTCTCTAATAACCTTGTTTGACTGAAATCTTATTTAAATGTAAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCTCTAATAACCTTGTTTGACTGAAATCTTATTTAAATGTAAGAA  350

seq1  TTATTTATATAATCTGGAGAAAAAAATGCATTGGGAGAGAGGTACATCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATATAATCTGGAGAAAAAAATGCATTGGGAGAGAGGTACATCAA  400

seq1  AAAAAAAAACCTATTTTCTCTCTTTTTTTGAGTGGTAAAGGTTGTTTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAACCTATTTTCTCTCTTTTTTTGAGTGGTAAAGGTTGTTTTGT  450

seq1  CTTGTTGGGAAGGTTGTGGAGAGGGTCCATGCCAGCGCACTGTGCTGCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTGGGAAGGTTGTGGAGAGGGTCCATGCCAGCGCACTGTGCTGCTC  500

seq1  GGCATGCACATTCTATGAATCCTTTGTCCTTCCGTCCATAGGACTTTGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGCACATTCTATGAATCCTTTGTCCTTCCGTCCATAGGACTTTGAT  550

seq1  GAGAAGAAACCTTAAATTTTGTTAAAATTTAATTTGGAACATCTTTGTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGAAACCTTAAATTTTGTTAAAATTTAATTTGGAACATCTTTGTGC  600

seq1  TGACAAATCATTGTGTTCTAATGAATTTTTCCTCACTTCATGATAGAACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAATCATTGTGTTCTAATGAATTTTTCCTCACTTCATGATAGAACT  650

seq1  GCATAATTCCTTTTATGTCTTCTGTATCTTCTATATTT-AAAGTTCTAAG  699
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GCATAATTCCTTTTATGTCTTCTGTATCTTCTATATTTAAAAGTTCTAAG  700

seq1  TTCTGAATTAATTTCCTGGACCATATGACTTT  731
      ||||||||||||||||||||||||||||||||
seq2  TTCTGAATTAATTTCCTGGACCATATGACTTT  732