BAC Information

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BAC

Clone NameB6Ng01-287P13
Chromosome14 (Build37)
Map Location 105,067,155 - 105,204,220
singlet/doubletdoublet
Overlap geneD130009I18Rik
Upstream geneSlain1, Ednrb, Pou4f1, 2610206B13Rik
Downstream geneLOC435420, Rbm26, LOC621103, LOC100043466, Ndfip2, LOC620376
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-287P13.bB6Ng01-287P13.g
ACCGA085756GA085757
length1,134191
definitionB6Ng01-287P13.b B6Ng01-287P13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(105,203,094 - 105,204,220)(105,067,155 - 105,067,339)
sequence
gaattctcagccccttccccagcatcatgtctgcctacttgcttccatgc
ttcccaccatgatgatactggaccaaacctctgaaactgtaagccagccc
ctattaaatgttttccttcataagaattgccttggtcatggtgtgcttat
gagaaattagaaatatgacaaaagagttttccctcaaagagaactttatt
tagaaaataagggagcaagtatttgctaagttatttttacttttagtagc
ttacaaataatgtttaactgtggcacttttagaaataaaaattgctctca
atgtttcccttgccctttcgtcctggagcgccctccctgcctcccatgtg
tctgcttcctccctccaatctgtttcagtcctctctctcctcccactcgc
ttcttctctttcctgccatttggagttgtgttgttccttacccaggcttt
catcaacacctcttggttttcctctcactgtctctacctagttctattct
ccacacacacacacacacacacacacacacacacacacacacacacacac
acactcacacacactcactcacacacacacacacacacacacacacacac
actcacacacacacacacacacactgagtctgcatatgagcagactagat
catctcgtatcctcctttctaggtccaaccattttttaaaagcaatttat
aatttcatttttctaagtaattaagcaaactctcatggtatatctataca
cctacacacacatatttttagtatccactcttctgtttatgggcatctaa
aacagtttcattccctttcttttgccacagtgccccaacaggcatggaaa
gatgaacatcttctctcattagcattgcaacccacagacacactcacaga
acagtgtggtgtgtgatgtggactaaagactgtcattgcacttagcaaga
aaagagttccaatggccaccccgatgagacaggtttgtaataagattttt
aaatgtaaagtcttggaagacaataagaatttaagaatggatggtgactg
aaataaaaagacatagtgataggtgggttaaattgaacacacgtagaaaa
ggaagctaatgggcagaagccactaattaggagg
tcagcatataattgcagtttctgcccctccctccttctctcccttcttcc
ttccctccctccttcccttcctttctccttccttccttccttccttccat
ccttccttccttccttcctccctccttcccttcctttctccttccttcct
tccttccttccttccttccttagtacctactcatcttcctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_105203094_105204220
seq2: B6Ng01-287P13.b_52_1185 (reverse)

seq1  CCTCCT-ATTAGTTGCTTCTGCCCATTTGGCTCCCTTTTTCTACGTGTGT  49
      |||||| |||||| ||||||||||||| |  |||  ||||||||||||||
seq2  CCTCCTAATTAGTGGCTTCTGCCCATTAGCTTCC--TTTTCTACGTGTGT  48

seq1  TCAATTT-ACCCA-CTATCACTATGTC-TTTTATTTCAGTCACCATCCAT  96
      ||||||| ||||| ||||||||||||| ||||||||||||||||||||||
seq2  TCAATTTAACCCACCTATCACTATGTCTTTTTATTTCAGTCACCATCCAT  98

seq1  TCTT-AATTC-TATTGTCTT-CAAGACTTTACATTTAAAAATCT--ATAC  141
      |||| ||||| ||||||||| |||||||||||||||||||||||   |||
seq2  TCTTAAATTCTTATTGTCTTCCAAGACTTTACATTTAAAAATCTTATTAC  148

seq1  AAACCTGTCTCATCGGGGTGGCCATTGGAACTC-TTTCTTGCTAAGTGCA  190
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AAACCTGTCTCATCGGGGTGGCCATTGGAACTCTTTTCTTGCTAAGTGCA  198

seq1  ATGACAGTCTTTAGTCCACATCACACACCCACACTGTTCTGTGAGTGTGT  240
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ATGACAGTCTTTAGTCCACATCACACA-CCACACTGTTCTGTGAGTGTGT  247

seq1  CTGTGGGTTGCAATGCTAATGAGAGAAGATGTTCATCTTTCCATGCCTGT  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGGTTGCAATGCTAATGAGAGAAGATGTTCATCTTTCCATGCCTGT  297

seq1  TGGGGCACTGTGGCAAAAGAAAGGGAATGAAACTGTTTTAGATGCCCATA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCACTGTGGCAAAAGAAAGGGAATGAAACTGTTTTAGATGCCCATA  347

seq1  AACAGAAGAGTGGATACTAAAAATATGTGTGTGTAGGTGTATAGATATAC  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAAGAGTGGATACTAAAAATATGTGTGTGTAGGTGTATAGATATAC  397

seq1  CATGAGAGTTTGCTTAATTACTTAGAAAAATGAAATTATAAATTGCTTTT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGAGTTTGCTTAATTACTTAGAAAAATGAAATTATAAATTGCTTTT  447

seq1  AAAAAATGGTTGGACCTAGAAAGGAGGATACGAGATGATCTAGTCTGCTC  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATGGTTGGACCTAGAAAGGAGGATACGAGATGATCTAGTCTGCTC  497

seq1  ATATGCAGACTCAGTGTGTGTGTGTGTGTGTGTGAGTGTGTGTGTGTGTG  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCAGACTCAGTGTGTGTGTGTGTGTGTGTGAGTGTGTGTGTGTGTG  547

seq1  TGTGTGTGTGTGTGTGTGAGTGAGTGTGTGTGAGTGTGTGTGTGTGTGTG  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGAGTGAGTGTGTGTGAGTGTGTGTGTGTGTGTG  597

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGAGAATAGAACTAG  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGAGAATAGAACTAG  647

seq1  GTAGAGACAGTGAGAGGAAAACCAAGAGGTGTTGATGAAAGCCTGGGTAA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGACAGTGAGAGGAAAACCAAGAGGTGTTGATGAAAGCCTGGGTAA  697

seq1  GGAACAACACAACTCCAAATGGCAGGAAAGAGAAGAAGCGAGTGGGAGGA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAACACAACTCCAAATGGCAGGAAAGAGAAGAAGCGAGTGGGAGGA  747

seq1  GAGAGAGGACTGAAACAGATTGGAGGGAGGAAGCAGACACATGGGAGGCA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGGACTGAAACAGATTGGAGGGAGGAAGCAGACACATGGGAGGCA  797

seq1  GGGAGGGCGCTCCAGGACGAAAGGGCAAGGGAAACATTGAGAGCAATTTT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGGCGCTCCAGGACGAAAGGGCAAGGGAAACATTGAGAGCAATTTT  847

seq1  TATTTCTAAAAGTGCCACAGTTAAACATTATTTGTAAGCTACTAAAAGTA  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTAAAAGTGCCACAGTTAAACATTATTTGTAAGCTACTAAAAGTA  897

seq1  AAAATAACTTAGCAAATACTTGCTCCCTTATTTTCTAAATAAAGTTCTCT  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAACTTAGCAAATACTTGCTCCCTTATTTTCTAAATAAAGTTCTCT  947

seq1  TTGAGGGAAAACTCTTTTGTCATATTTCTAATTTCTCATAAGCACACCAT  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGGAAAACTCTTTTGTCATATTTCTAATTTCTCATAAGCACACCAT  997

seq1  GACCAAGGCAATTCTTATGAAGGAAAACATTTAATAGGGGCTGGCTTACA  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAAGGCAATTCTTATGAAGGAAAACATTTAATAGGGGCTGGCTTACA  1047

seq1  GTTTCAGAGGTTTGGTCCAGTATCATCATGGTGGGAAGCATGGAAGCAAG  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAGAGGTTTGGTCCAGTATCATCATGGTGGGAAGCATGGAAGCAAG  1097

seq1  TAGGCAGACATGATGCTGGGGAAGGGGCTGAGAATTC  1127
      |||||||||||||||||||||||||||||||||||||
seq2  TAGGCAGACATGATGCTGGGGAAGGGGCTGAGAATTC  1134

seq1: chr14_105067155_105067339
seq2: B6Ng01-287P13.g_69_265

seq1  GAATTCTCAGCATATAATTGCAGTTTCTGCCCCTCCCTCCTTCTCTCCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGCATATAATTGCAGTTTCTGCCCCTCCCTCCTTCTCTCCCT  50

seq1  TCTTCCTTCCCTCCCTCCTTCCCTTCCTTTCTCCTTCCTTCCTTCCTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTTCCCTCCCTCCTTCCCTTCCTTTCTCCTTCCTTCCTTCCTTCC  100

seq1  TTCCTTCCTTCCTTCCTTCCTTCCTCCCTCCTTCCCTTCCTTTCTCCTTC  150
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATCCTTCCTTCCTTCCTTCCTCCCTCCTTCCCTTCCTTTCTCCTTC  150

seq1  CTTCCTTCCTTCCTTCCTTCCTTCCTT------------CCTTCCTT  185
      |||||||||||||||||||||||||||             |||||||
seq2  CTTCCTTCCTTCCTTCCTTCCTTCCTTAGTACCTACTCATCTTCCTT  197