BAC Information

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BAC

Clone NameB6Ng01-288B18
Chromosome14 (Build37)
Map Location 83,130,811 - 83,131,959
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100043773
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-288B18.bB6Ng01-288B18.g
ACCGA085859GA085860
length1,1441,173
definitionB6Ng01-288B18.b B6Ng01-288B18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgattcccaccttatggggagacagcccgtgtccacacacaca
cacacacacacacacaagtttactttaattaagttggcaaggatttggat
tggtggtctttcttttcacctctgttgagttaacaatgtatatagtacat
cgaagtattacatatcctacaaaagttctttttcatttggctacctcaat
ttgctaaattatcaactgagaacttgtaatgctctttcctcagatatggc
catttcaattctaggccttggaaaatggcattgttccctcttatgtggaa
tcttatatattaggagaaaaagttatacatttccaagcaatagaaaatag
tcctagagctttgcaaagactaagcaagtattccactgctcagctatatc
tgcagaccttgagttcttgattcagttacagaatcaaactaaagaccaat
ttggtatcattatataagtctctggttgttaaagaatctcatcccatcat
ggatgatttgaagctagtctctgatcatgtgtatgtaacagacactgtta
gatagtgttatttttcaaatcaatagtatttgaattacttgtatctttaa
acatgcatgtgagatattgcctggactatggtaattgatgcaggaagact
cattttaattgtgggctggtccatatcttgatcaaaagatatcagaatgt
ggaagatagagaaagccaactgattagtatcaaactcaggtgtttgttgt
tttttgttgttgttttgttttgtttttgttgatgttttggttctcatgac
tgagattacaatgtgagtaggtacttcaaggaccctctgcctggacttcc
tcaccaagatggactgcacctcgaaatatgagaaaaaaaaagtaaactac
catgtgatttcatattaatcagtaaaaatgctagggaaaaaaaaacacct
tagtttggggaggggggtatcccatgacactgatggtcctgtccttcact
aagtaagtgcatatttaggcacttccacattctaaagctagccacaataa
ccatttccttattacgccatttcttatggctgacttgtcctgaaataatc
acaactctaagcctgtcagcacaccaaaggtccagcagtaaaaa

gaattctcacccaaggaataccaaatggcagagaagcccctgaaaaaatt
ttcaacatccttagtcatcagggaaatgcaaatcaaaacaagcctgagat
accacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggtggttactca
gaaaattggacatagtactactggaggatcccgcaatacctctcctgggc
atatatccagaagaggtcccaacctgtaagaaggcacatgctccactatg
ttcatcgcagccttatttataatggccagaagctgtaaagaacccagatg
cccctcaacagaggaatggatacagaaaatgtggtacatttacacaatgg
agtactactcatttattaaaaagaatgaatttatgaaattcctaggcaaa
tggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaag
gaactcacataatatgtactcactgataagtggatattagcccagaatct
taggatacccaagatataagatacaatttgctaaacgcatgaaacccaag
aataacaaagaccaaagtgtggacactttgccccttcttagaattgggaa
caaaacaccgatggaaggagttacagagacaaagtttggagctgtgacga
aaggatggaccatctagagactaacatatctggtgatccatcccatagtc
agcttccaagcactgacaccattgcacaccctagcaagattttgctgaaa
ggacctagatagagctctctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatgggatcacaggcctcca
atggagaagctagagaaagtaaccaagagctaaagagatctgcaacccta
tagtgcaacacatatgactccaccagttcccctgagctcttgtctctagc
tgcatatgatcagaagatgctagtcgcatcaactggaaaggagagcccat
gactgcaactttaattgccagttacaggcatgcagggtctaaagggccaa
gtaggtggtgctataggggcgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_83130811_83131959
seq2: B6Ng01-288B18.b_45_1188 (reverse)

seq1  TTTTTACTGCTGGACCTTT-GTGTGCTGACAG--CTAGAGTTTGTGGATT  47
      ||||||||||||||||||| ||||||||||||   ||||| |||| ||||
seq2  TTTTTACTGCTGGACCTTTGGTGTGCTGACAGGCTTAGAG-TTGT-GATT  48

seq1  AATCTCAGGAACAAGTCAGGCATAAGGAAATGGCGTAATAAGGGAATGGG  97
       || ||||| ||||||||| ||||| ||||||||||||||||| ||||| 
seq2  -ATTTCAGG-ACAAGTCAGCCATAA-GAAATGGCGTAATAAGGAAATGGT  95

seq1  TATTTGTGGCTAGCTTTAAGAATGTGGAAGTGCCTAAATAATGCACTTAC  147
      || |||||||||||||| ||||||||||||||||||||| ||||||||||
seq2  TA-TTGTGGCTAGCTTT-AGAATGTGGAAGTGCCTAAAT-ATGCACTTAC  142

seq1  TTAGTGAAGGACAAGGACCATCAGTGTCATGGGATACCCCCCT-CCCAAA  196
      |||||||||||| |||||||||||||||||||||||||||||| ||||||
seq2  TTAGTGAAGGAC-AGGACCATCAGTGTCATGGGATACCCCCCTCCCCAAA  191

seq1  CTAAGGTGTTTTTTTTTCCCTAGCATTTTTACTGATTTAATATGAAATCA  246
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CTAAGGTGTTTTTTTTTCCCTAGCATTTTTACTGA-TTAATATGAAATCA  240

seq1  CATGGTAGTTTAC-TTTTTTTTCTCATATTTCGAGGTGCAGTCCATCTTG  295
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CATGGTAGTTTACTTTTTTTTTCTCATATTTCGAGGTGCAGTCCATCTTG  290

seq1  GTGAGGAAGTCCAGGCAGAGGGTCCTTGAAGTACCTACTCACATTGTAAT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGAAGTCCAGGCAGAGGGTCCTTGAAGTACCTACTCACATTGTAAT  340

seq1  CTCAGTCATGAGAACCAAAACATCAACAAAAACAAAACAAAACAACAACA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTCATGAGAACCAAAACATCAACAAAAACAAAACAAAACAACAACA  390

seq1  AAAAACAACAAACACCTGAGTTTGATACTAATCAGTTGGCTTTCTCTATC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAACAAACACCTGAGTTTGATACTAATCAGTTGGCTTTCTCTATC  440

seq1  TTCCACATTCTGATATCTTTTGATCAAGATATGGACCAGCCCACAATTAA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACATTCTGATATCTTTTGATCAAGATATGGACCAGCCCACAATTAA  490

seq1  AATGAGTCTTCCTGCATCAATTACCATAGTCCAGGCAATATCTCACATGC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGTCTTCCTGCATCAATTACCATAGTCCAGGCAATATCTCACATGC  540

seq1  ATGTTTAAAGATACAAGTAATTCAAATACTATTGATTTGAAAAATAACAC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTAAAGATACAAGTAATTCAAATACTATTGATTTGAAAAATAACAC  590

seq1  TATCTAACAGTGTCTGTTACATACACATGATCAGAGACTAGCTTCAAATC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAACAGTGTCTGTTACATACACATGATCAGAGACTAGCTTCAAATC  640

seq1  ATCCATGATGGGATGAGATTCTTTAACAACCAGAGACTTATATAATGATA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATGATGGGATGAGATTCTTTAACAACCAGAGACTTATATAATGATA  690

seq1  CCAAATTGGTCTTTAGTTTGATTCTGTAACTGAATCAAGAACTCAAGGTC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATTGGTCTTTAGTTTGATTCTGTAACTGAATCAAGAACTCAAGGTC  740

seq1  TGCAGATATAGCTGAGCAGTGGAATACTTGCTTAGTCTTTGCAAAGCTCT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGATATAGCTGAGCAGTGGAATACTTGCTTAGTCTTTGCAAAGCTCT  790

seq1  AGGACTATTTTCTATTGCTTGGAAATGTATAACTTTTTCTCCTAATATAT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTATTTTCTATTGCTTGGAAATGTATAACTTTTTCTCCTAATATAT  840

seq1  AAGATTCCACATAAGAGGGAACAATGCCATTTTCCAAGGCCTAGAATTGA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTCCACATAAGAGGGAACAATGCCATTTTCCAAGGCCTAGAATTGA  890

seq1  AATGGCCATATCTGAGGAAAGAGCATTACAAGTTCTCAGTTGATAATTTA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCCATATCTGAGGAAAGAGCATTACAAGTTCTCAGTTGATAATTTA  940

seq1  GCAAATTGAGGTAGCCAAATGAAAAAGAACTTTTGTAGGATATGTAATAC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATTGAGGTAGCCAAATGAAAAAGAACTTTTGTAGGATATGTAATAC  990

seq1  TTCGATGTACTATATACATTGTTAACTCAACAGAGGTGAAAAGAAAGACC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGATGTACTATATACATTGTTAACTCAACAGAGGTGAAAAGAAAGACC  1040

seq1  ACCAATCCAAATCCTTGCCAACTTAATTAAAGTAAACTTGTGTGTGTGTG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATCCAAATCCTTGCCAACTTAATTAAAGTAAACTTGTGTGTGTGTG  1090

seq1  TGTGTGTGTGTGTGGACACGGGCTGTCTCCCCATAAGGTGGGAATCAAGA  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGGACACGGGCTGTCTCCCCATAAGGTGGGAATCAAGA  1140

seq1  ATTC  1149
      ||||
seq2  ATTC  1144


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