BAC Information

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BAC

Clone NameB6Ng01-288D13
Chromosome14 (Build37)
Map Location 97,564,492 - 97,687,376
singlet/doubletdoublet
Overlap genenone
Upstream geneKlhl1, LOC100043366, LOC668654
Downstream geneEG668659, Dach1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-288D13.bB6Ng01-288D13.g
ACCGA085941GA085942
length1,138738
definitionB6Ng01-288D13.b B6Ng01-288D13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,686,234 - 97,687,376)(97,564,492 - 97,565,050)
sequence
gaattcatgaatatagttgaatgttcagcatagtgctgtttacccatcac
ctcaggcccaagctaaaatgctgtcttttcgtatacttgtacttccaaca
ccagcttcactctcatctaaaacattctgtgtactgttataaaacaataa
caacaaaatacaattcaagtttttaattcaggaaagggaacgatgtgaga
ccaaagaagatattccagcaataccaaatgctgctggacaagctctgtat
aggacctacatcacttcaagggactcagtgattactctttatgctgttaa
tgatttcagatggccaaggccaatgaatcatacagatagaaaacctgctt
gcttatcctatatcccagttttccactgatctaaaaaaaaataaacttca
acttgatctgagaaatactgtgctgggttgtttattacagggctagcatt
tctaaaactaaggccatcattgtaaagtcatgtcaggaaatgactgtggc
tgcattcaaaagaggaagcatttcctctatggggcatagaagcatgctgg
gaagaaacagggaaactaattgtgtgcaaataattttgttgaccagttta
tagcagactttgtggtagttgataaaagttggcatttaatttattcaagg
tctactatgtggtttttaaagagaaaaccaattactccttacaactaaga
gctttctttttcttagagaatctaaagtgagttaataaaaaatgataaag
atgcaatgatttaacagtgggtcaggggagcaacagtgaattcaggccat
gaaaaaatctaaaccatctcaagatcaacttcaaatttatacagttttta
catttcctgagttgataaataggatcttaaaatatttgtaaagatatttg
gaaaaaaaagtctcttaatatgattttcaaaattagagattattggactg
tccacataattatgaagtatggattagtaaaattattctcatcgtttaaa
agtactaatatgggaagatatttatcaaaagagttacagaagtggggggt
ggaaagattctaagcaaacgaagttagacttccgggtaacagtgttttct
gacacagtaggatgatggaagagagtatgtgtgatcaa

gaattccaggcaactaagtatgctgagagcagaacaaatagttgtcccca
ggagtaagcaaaccggttggttatctaataccaaaaaactcagccctgaa
aacatacatataagtaacagtagaaagactgagctagatatagttaggaa
atcatatgtatttccatatacaagtatgcatttaatgacaaataacgaaa
gaagaggctatacgttttgagcagaacaaatacatttatgggaatgttta
ggagtgtggggagcgggtgtggcagtagtcccaagatggcgcccgggact
gcagccaagtcttatgacttgcacctgacttcctcatcacctgaaaataa
gccacgtccatagtgagatctgcgcaggtgcaccatgacacaagatcagg
ccatttgatgaaggccagtgaactgagattacacgaactgggctgatggg
gcgtggttgaggggttatataagggattgtgattgggggctcagagattc
ctgcttgcatgttgaaaggttcctgaaaaaactgctttgagaagaacgct
gtgtcattgctcttttctgctggttggagacagaagtgacaaaggaggag
agaggaaatgtcatcatttagattacaatctcaaaaaaaaaaaaaaagaa
gaaaagtccaaaatgtgtaccctataagacagtgaacgatattgaggctt
ttgtgacacgaaggacagcagcaatggtagggaagata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_97686234_97687376
seq2: B6Ng01-288D13.b_49_1186 (reverse)

seq1  TTGATCACACATACTCTTCTTTCATCATCCCCTACTGTGTCCAGAAACAC  50
      |||||||||||||||| |||| ||||||  |||||||||||   ||||||
seq2  TTGATCACACATACTC-TCTTCCATCAT--CCTACTGTGTCAGAAAACAC  47

seq1  TGTTACCCGGAAGTCCTTAACTCCCTTTTGCCTTTAGAATCTTTCCA--C  98
      |||||||||||||||  |||||  | |||||  ||||||||||||||  |
seq2  TGTTACCCGGAAGTC--TAACT-TCGTTTGC--TTAGAATCTTTCCACCC  92

seq1  CCCACTTCTGTAACTCTTTTGATAAATATCTT-CCATATTAGTACTTTTA  147
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CCCACTTCTGTAACTCTTTTGATAAATATCTTCCCATATTAGTACTTTTA  142

seq1  AACGATGAGAATAATTTTACTAATCCATACTTCATAATTATGTGGACAGT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGATGAGAATAATTTTACTAATCCATACTTCATAATTATGTGGACAGT  192

seq1  CCAATAATCTCTAATTTTGAAAATCATATTAAGAGACTTTTTTTTCCAAA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATAATCTCTAATTTTGAAAATCATATTAAGAGACTTTTTTTTCCAAA  242

seq1  TATCTTTACAAATATTTTAAGATCCTATTTATCAACTCAGGAAATGTAAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTTACAAATATTTTAAGATCCTATTTATCAACTCAGGAAATGTAAA  292

seq1  AACTGTATAAATTTGAAGTTGATCTTGAGATGGTTTAGATTTTTTCATGG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTATAAATTTGAAGTTGATCTTGAGATGGTTTAGATTTTTTCATGG  342

seq1  CCTGAATTCACTGTTGCTCCCCTGACCCACTGTTAAATCATTGCATCTTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAATTCACTGTTGCTCCCCTGACCCACTGTTAAATCATTGCATCTTT  392

seq1  ATCATTTTTTATTAACTCACTTTAGATTCTCTAAGAAAAAGAAAGCTCTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTTTTATTAACTCACTTTAGATTCTCTAAGAAAAAGAAAGCTCTT  442

seq1  AGTTGTAAGGAGTAATTGGTTTTCTCTTTAAAAACCACATAGTAGACCTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTAAGGAGTAATTGGTTTTCTCTTTAAAAACCACATAGTAGACCTT  492

seq1  GAATAAATTAAATGCCAACTTTTATCAACTACCACAAAGTCTGCTATAAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAATTAAATGCCAACTTTTATCAACTACCACAAAGTCTGCTATAAA  542

seq1  CTGGTCAACAAAATTATTTGCACACAATTAGTTTCCCTGTTTCTTCCCAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCAACAAAATTATTTGCACACAATTAGTTTCCCTGTTTCTTCCCAG  592

seq1  CATGCTTCTATGCCCCATAGAGGAAATGCTTCCTCTTTTGAATGCAGCCA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTTCTATGCCCCATAGAGGAAATGCTTCCTCTTTTGAATGCAGCCA  642

seq1  CAGTCATTTCCTGACATGACTTTACAATGATGGCCTTAGTTTTAGAAATG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCATTTCCTGACATGACTTTACAATGATGGCCTTAGTTTTAGAAATG  692

seq1  CTAGCCCTGTAATAAACAACCCAGCACAGTATTTCTCAGATCAAGTTGAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCCCTGTAATAAACAACCCAGCACAGTATTTCTCAGATCAAGTTGAA  742

seq1  GTTTATTTTTTTTTAGATCAGTGGAAAACTGGGATATAGGATAAGCAAGC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTTTTTTTTAGATCAGTGGAAAACTGGGATATAGGATAAGCAAGC  792

seq1  AGGTTTTCTATCTGTATGATTCATTGGCCTTGGCCATCTGAAATCATTAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTTCTATCTGTATGATTCATTGGCCTTGGCCATCTGAAATCATTAA  842

seq1  CAGCATAAAGAGTAATCACTGAGTCCCTTGAAGTGATGTAGGTCCTATAC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATAAAGAGTAATCACTGAGTCCCTTGAAGTGATGTAGGTCCTATAC  892

seq1  AGAGCTTGTCCAGCAGCATTTGGTATTGCTGGAATATCTTCTTTGGTCTC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTTGTCCAGCAGCATTTGGTATTGCTGGAATATCTTCTTTGGTCTC  942

seq1  ACATCGTTCCCTTTCCTGAATTAAAAACTTGAATTGTATTTTGTTGTTAT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCGTTCCCTTTCCTGAATTAAAAACTTGAATTGTATTTTGTTGTTAT  992

seq1  TGTTTTATAACAGTACACAGAATGTTTTAGATGAGAGTGAAGCTGGTGTT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTATAACAGTACACAGAATGTTTTAGATGAGAGTGAAGCTGGTGTT  1042

seq1  GGAAGTACAAGTATACGAAAAGACAGCATTTTAGCTTGGGCCTGAGGTGA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTACAAGTATACGAAAAGACAGCATTTTAGCTTGGGCCTGAGGTGA  1092

seq1  TGGGTAAACAGCACTATGCTGAACATTCAACTATATTCATGAATTC  1143
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTAAACAGCACTATGCTGAACATTCAACTATATTCATGAATTC  1138


seq1: chr14_97564492_97565050
seq2: B6Ng01-288D13.g_247_806

seq1  CATTTAATGACAAATAACGAAAGAAGAGGCTATACGTTTTGAGCAGAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAATGACAAATAACGAAAGAAGAGGCTATACGTTTTGAGCAGAACA  50

seq1  AATACATTTATGGGAATGTTTAGGAGTGTGGGGAGCGGGTGTGGCAGTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACATTTATGGGAATGTTTAGGAGTGTGGGGAGCGGGTGTGGCAGTAG  100

seq1  TCCCAAGATGGCGCCCGGGACTGCAGCCAAGTCTTATGACTTGCACCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAGATGGCGCCCGGGACTGCAGCCAAGTCTTATGACTTGCACCTGA  150

seq1  CTTCCTCATCACCTGAAAATAAGCCACGTCCATAGTGAGATCTGCGCAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCATCACCTGAAAATAAGCCACGTCCATAGTGAGATCTGCGCAGG  200

seq1  TGCACCATGACACAAGATCAGGCCATTTGATGAAGGCCAGTGAACTGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACCATGACACAAGATCAGGCCATTTGATGAAGGCCAGTGAACTGAGA  250

seq1  TTACACGAACTGGGCTGATGGGGCGTGGTTGAGGGGTTATATAAGGGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACGAACTGGGCTGATGGGGCGTGGTTGAGGGGTTATATAAGGGATT  300

seq1  GTGATTGGGGGCTCAGAGATTCCTGCTTGCATGTTGAAAGGTTCCTGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTGGGGGCTCAGAGATTCCTGCTTGCATGTTGAAAGGTTCCTGAAA  350

seq1  AAACTGCTTTGAGAAGAACGCTGTGTCATTGCTCTTTTCTGCTGGTTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGCTTTGAGAAGAACGCTGTGTCATTGCTCTTTTCTGCTGGTTGGA  400

seq1  GACAGAAGTGACAAAGGAGGAGAGAGGAAATGTCATCA-TTAGATTACAA  449
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GACAGAAGTGACAAAGGAGGAGAGAGGAAATGTCATCATTTAGATTACAA  450

seq1  TCTCAAAAAAAAAAAAAAAGAAGAAAAGTTCAAACATGTGTA-CCTAGAA  498
      ||||||||||||||||||||||||||||| |||| ||||||| |||| ||
seq2  TCTCAAAAAAAAAAAAAAAGAAGAAAAGTCCAAA-ATGTGTACCCTATAA  499

seq1  GACAGTGAACGATATTGAGGCTTTTGTGACACGAAGGACAGTAGCAATGG  548
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GACAGTGAACGATATTGAGGCTTTTGTGACACGAAGGACAGCAGCAATGG  549

seq1  TAGTGAAGATA  559
      ||| |||||||
seq2  TAGGGAAGATA  560


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