BAC Information

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BAC

Clone NameB6Ng01-288J12
Chromosome14 (Build37)
Map Location 22,142,543 - 22,143,705
singlet/doubletsinglet
Overlap geneAdk
Upstream geneEcd, AA536717, Dnajc9, Mrps16, Ttc18, Anxa7, Zmynd17, Ppp3cb, Usp54, Myoz1, Synpo2l, Sec24c, Fut11, Chchd1, 2310021P13Rik, Ndst2, Camk2g, Plau, EG620119, Vcl, Ap3m1
Downstream geneMyst4, EG435391, Dusp13, Samd8, Vdac2, Comtd1, Zfp503, 1700112E06Rik, EG665075
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-288J12.bB6Ng01-288J12.g
ACCGA086217GA086218
length1,1541,165
definitionB6Ng01-288J12.b B6Ng01-288J12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagcatgcattgagacttaatgttcttttctcaattatggttgat
tagtaagccagtgtgatggctgatgaggcaaaggcaggaggattgccaag
agttcaaggccagcttagactatagatccagaccctgccttttaaaaaag
taagaaaaataaatgaatgaataattaaataaaacaaaacctttacttaa
ccctattattgtattatatttcccacttttaaatgaaaggcctgagttca
taggttctatcgactgaagaagctttgcttcttctctaggatgtaaactc
tttagctgttatgttttggattaattttttaacatcttcaaagtttaaac
atcttctttagcagcatcatttttcaactaaactcacctgcaatcggctt
aataaaggccattctacgtgcaggtaattataaattatatctattgatgc
cagctcataccagctgctttgtagtcattgtctacctgtacatgactaaa
gaacttgattattcttgtttttcattattattaaattaagaagtttttga
atagagtcattttgaaaatggttcttaagagtaataccttttaaggtttc
ctaatcactagataattaacctgccaggattaagtacactcaactttgcc
tcaggatgctcagttctcaaataaggtcaattatctcctgtaatgactac
tttgtcaagagttaccacttaattccacagtgaagcagcacatcacccag
acagtgcactttaagatatttaaggtggtgaaatacagcttgaaattggc
cagaagagctctgttgaattatttcatacgtactgagaataatatattgc
ttattagcctcccccttctgggcgtactattttgagtctgacaaatgact
taactttataaagatattctatagctctgtctcatcagatccttctctgg
tgaatttgccgcactcccttgtctttacagggagtcctgggctaagcttt
ctgacttcagagtgtagagcaggaagctgagttgctttctctccgatgca
gtcatttcacacgtgctgctttcgtggtagacaggttcactccatccagg
tggcagcttcagcatcacagtgctagtattacaggtccagtgttccattt
ctcc
gaattcttctcagggaactctccagtaccattgctgcctgcacactgccg
tgatgataatggactaaatctctgaactgtaaggcagccccaattaattg
ttttcctttattagacatgccatggtcatagagtctctttacagcaatag
aaaccctaactaagacactatctctgcctccttcagactcatgcttgtgg
attagaagggtcatccatctctctctctgctgccatgctccttgccatag
tggtcttggactcaccctctgaaactgtaagtctccattaaacacttcct
tctgtaaattgcacagcaatagaaaagtgactgagacagaagttggtacc
gggcactgggcaccaggtcattgttgtgacagggctggccatgttggttt
ttgaaggattgtgggaggtgttgggactatggactaggaaagtagttgaa
tgctgtaagtggggccattatggcaggagtttggaagacagaagggctga
gagcagtgtggactatggagactcagctgaacagggaaacaatactagca
acttggatacaggccattcttgtaacattttggcaaataatgtggctgct
ttttgcccttgtcctaagaatctgtctgaggctaaattttggataatttt
gtgggcagaggagatttgaagacggtctcatgttgactctgtcatgtgta
attagcgatcactcaggctggtctacaaagaaaaagagcaagtggggcaa
aaagaaaagtaaactgtagttggagagccaaaggagaccaggaaatgcag
tgttggtaccaaagcctgtgttaaaagagatcagggaaatggggataaaa
gggctgctgccctcagatcagacctcacccagctaatactgtgactgtaa
agaaaggggcgaaggaatttatcttgtccataaagagtagtgacaaagca
aacttaatgtagatgtccacttaaaggagatttccagaattccatgccaa
gcagcagcagtatcttggaagcactagccacattgtttcctggttttaaa
gtcctgaagacacagggcattacggggttggaaagtccttctctgtgtgt
aaggtggtagggaagcactgagagtcatgtcatggttgccaggggaacct
ctctgcacttgtagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_22142543_22143705
seq2: B6Ng01-288J12.b_47_1200

seq1  GAATTCAGCATGCATTGAGACTTAATGTTCTTTTCTCAATTATGGTTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCATGCATTGAGACTTAATGTTCTTTTCTCAATTATGGTTGAT  50

seq1  TAGTAAGCCAGTGTGATGGCTGATGAGGCAAAGGCAGGAGGATTGCCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAAGCCAGTGTGATGGCTGATGAGGCAAAGGCAGGAGGATTGCCAAG  100

seq1  AGTTCAAGGCCAGCTTAGACTATAGATCCAGACCCTGCCTTTTAAAAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAAGGCCAGCTTAGACTATAGATCCAGACCCTGCCTTTTAAAAAAG  150

seq1  TAAGAAAAATAAATGAATGAATAATTAAATAAAACAAAACCTTTACTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAAAATAAATGAATGAATAATTAAATAAAACAAAACCTTTACTTAA  200

seq1  CCCTATTATTGTATTATATTTCCCACTTTTAAATGAAAGGCCTGAGTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTATTATTGTATTATATTTCCCACTTTTAAATGAAAGGCCTGAGTTCA  250

seq1  TAGGTTCTATCGACTGAAGAAGCTTTGCTTCTTCTCTAGGATGTAAACTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTCTATCGACTGAAGAAGCTTTGCTTCTTCTCTAGGATGTAAACTC  300

seq1  TTTAGCTGTTATGTTTTGGATTAATTTTTTAACATCTTCAAAGTTTAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCTGTTATGTTTTGGATTAATTTTTTAACATCTTCAAAGTTTAAAC  350

seq1  ATCTTCTTTAGCAGCATCATTTTTCAACTAAACTCACCTGCAATCGGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCTTTAGCAGCATCATTTTTCAACTAAACTCACCTGCAATCGGCTT  400

seq1  AATAAAGGCCATTCTACGTGCAGGTAATTATAAATTATATCTATTGATGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAGGCCATTCTACGTGCAGGTAATTATAAATTATATCTATTGATGC  450

seq1  CAGCTCATACCAGCTGCTTTGTAGTCATTGTCTACCTGTACATGACTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCATACCAGCTGCTTTGTAGTCATTGTCTACCTGTACATGACTAAA  500

seq1  GAACTTGATTATTCTTGTTTTTCATTATTATTAAATTAAGAAGTTTTTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTGATTATTCTTGTTTTTCATTATTATTAAATTAAGAAGTTTTTGA  550

seq1  ATAGAGTCATTTTGAAAATGGTTCTTAAGAGTAATACCTTTTAAGGTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGTCATTTTGAAAATGGTTCTTAAGAGTAATACCTTTTAAGGTTTC  600

seq1  CTAATCACTAGATAATTAACCTGCCAGGATTAAGTACACTCAACTTTGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATCACTAGATAATTAACCTGCCAGGATTAAGTACACTCAACTTTGCC  650

seq1  TCAGGATGCTCAGTTCTCAAATAAGGTCAATTATCTCCTGTAATGACTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGATGCTCAGTTCTCAAATAAGGTCAATTATCTCCTGTAATGACTAC  700

seq1  TTTGTCAAGAGTTACCACTTAATTCCACAGTGAAGCAGCACATCACCCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCAAGAGTTACCACTTAATTCCACAGTGAAGCAGCACATCACCCAG  750

seq1  ACAGTGCACTTTAAGATATTTAAGGTGGTGAAATACAGCTTGAAATTGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGCACTTTAAGATATTTAAGGTGGTGAAATACAGCTTGAAATTGGC  800

seq1  CAGAAGAGCTCTGTTGAATTATTTCATACGTACTGAGAATAATATATTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGAGCTCTGTTGAATTATTTCATACGTACTGAGAATAATATATTGC  850

seq1  TTATTAGCCTCCCCCTTCTGGGCGTACTATTTTGAGTCTGACAAATGACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAGCCTCCCCCTTCTGGGCGTACTATTTTGAGTCTGACAAATGACT  900

seq1  TAACTTTATAAAGATATTCTATAGCTCTGTCTCATCAGATCCTTCTCTGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTTATAAAGATATTCTATAGCTCTGTCTCATCAGATCCTTCTCTGG  950

seq1  TGAATTTGCCGCACTCCCTTGTCTTTACAGGGAGTCCTGGGCTAAAGCTT  1000
      |||||||||||||||||||||||||||||||||||||||||||||   ||
seq2  TGAATTTGCCGCACTCCCTTGTCTTTACAGGGAGTCCTGGGCTAAGCTTT  1000

seq1  CTGACTTCAGAGTGTAGAGCAGGGAAGCTGAGGTTGCTTTCTCTCCGATG  1050
      ||||||||||||||||||||| ||||||||| ||||||||||||||||||
seq2  CTGACTTCAGAGTGTAGAGCA-GGAAGCTGA-GTTGCTTTCTCTCCGATG  1048

seq1  CAGTCATTTCACACGTGCTGCTTTCGGTGGTAAGACAGGGTTTCACTCCA  1100
      ||||||||||||||||||||||||| ||||| |||||||  |||||||||
seq2  CAGTCATTTCACACGTGCTGCTTTC-GTGGT-AGACAGG--TTCACTCCA  1094

seq1  TCCCAGTTGGCCAGCCTCAGCATCCACAGTGCTAGTATTACAGGTTCCAG  1150
      | |||| ||| |||| ||||||| |||||||||||||||||||| |||||
seq2  T-CCAGGTGG-CAGCTTCAGCAT-CACAGTGCTAGTATTACAGG-TCCAG  1140

seq1  TGTTCC-TTTCTCC  1163
      |||||| |||||||
seq2  TGTTCCATTTCTCC  1154