BAC Information

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BAC

Clone NameB6Ng01-289C09
Chromosome14 (Build37)
Map Location 114,783,413 - 114,914,133
singlet/doubletdoublet
Overlap geneLOC100043821
Upstream geneLOC100043510, LOC382947, LOC668791
Downstream geneLOC100043521, Gpc5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-289C09.bB6Ng01-289C09.g
ACCGA086626GA086627
length7581,178
definitionB6Ng01-289C09.b B6Ng01-289C09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(114,783,413 - 114,784,166)(114,912,979 - 114,914,133)
sequence
gaattccctacctggggatccatcctacatgcagaaaccaaacacagaca
ttattgtggatgcccagaagcccttgctgaaaggagctgtctcctgagag
gctgtgtgagatcctgacaaatacagaggagggtgcttgaagccaactat
tgaactaggcatggggtccccaatggaggagttagggtaagtactgaagg
agctgaagaggacttatatggcatcaatgggagtggaatcccttggtctt
ttgaaggtttgatgccccagtgtaagggaatgctaaggctgtgaggcagg
agtgggtgggtggcagagcactctcatagaagcagtagggaggggggagg
gaagatgggatttgcagaggggaaactaggaaaggggataacatttgaaa
tgtaaacaaataaaatatccaatttaaaaaaatactgttctctatcaagt
aaaattgacatcatagattttttttttattatgttcactttctttctgaa
acttttctaactggaaatagcatctccactggaatcatacatgtacactt
aataatatatctgtaaatagtgaagaattagtaaactgccaagtttaatt
aatttaatgaagatgcacctgttaactattgcatagtcttaagacttgat
catcctgagtgaggtaacccaaacacaaaaagaacacacatgttatgcac
tcactggtaagtgaatattagtccagaagctcagaatacccaattataca
attcacat

gaattccaggagcttggttgcattgcctacatgactgatggacacatatt
atatctgtgggggagctgtgggaggcagtagctgtgacaggagccagggg
ccgaggaggtgtggcagaacacctgctgtcccttagggtcactggggttc
aaggcctgtgcttgactggggaccacatatatggatgttttatctgaaaa
aactaatactatgtattggcataaaaaattagtaactaaaataaaaaaga
aaatggtgtttgctctatgttctatgctgtgtgtttatattttaacttta
tcaaagtgggtgaacaaagtctctgaagatgctcagtttagcaccgccta
atccaagatcctcactctgttcctgtagctttttaatcctctgagaaatg
catattcaccttcctgggtattctctaatcggaattggttgacaaacatt
aaataatcaatgacttttctaagacaagaattcagtttaggaaatgggaa
cgcaagtgcagagcactgacatggggtccttgaacatctactctctctac
tcgacatcactaagaattcacagttctttcaactgctttgaatatcagaa
tgatcttctatttttgcataaactaggaatttaaaaataattttatgatt
ctctctctttctttagtttgtctagaggtttatttcatcctatatacaat
gctttgtaactttatatatacaatataactttatgtgtacataaaaatgg
atatattttcatgtaattatatataacccattttaatactactttaactc
tactgtatagctgaatttcttttgcatattttagatttttaatgaccatt
actattacaaaaagtgttgctaaatatattttatatagtttattttttat
taaatcattccattcggtttacatctcaaatgataaccccacttttccag
gttatccctccaccaaatccccatttccaacatctgcccttccccctcct
cccctttgcctgcatgagggtgctcccccaccaccctctctctggactca
actacctccagcaatcctctatgcttgggtataaccctctgaaccaagga
cctcccttcccattgctgtcaggccaggccattccctgctacatatgtat
acctggagtatcctttcccaaggtacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_114783413_114784166
seq2: B6Ng01-289C09.b_47_804

seq1  GAATTCCCTACCTGGGGATCCATCCTACATGCAGAAACCAAACACAGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTACCTGGGGATCCATCCTACATGCAGAAACCAAACACAGACA  50

seq1  TTATTGTGGATGCCCAGAAGCCCTTGCTGAAAGGAGCTGTCTCCTGAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGTGGATGCCCAGAAGCCCTTGCTGAAAGGAGCTGTCTCCTGAGAG  100

seq1  GCTGTGTGAGATCCTGACAAATACAGAGGAGGGTGCTTGAAGCCAACTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGTGAGATCCTGACAAATACAGAGGAGGGTGCTTGAAGCCAACTAT  150

seq1  TGAACTAGGCATGGGGTCCCCAATGGAGGAGTTAGGGTAAGTACTGAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTAGGCATGGGGTCCCCAATGGAGGAGTTAGGGTAAGTACTGAAGG  200

seq1  AGCTGAAGAGGACTTATATGGCATCAATGGGAGTGGAATCCCTTGGTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAAGAGGACTTATATGGCATCAATGGGAGTGGAATCCCTTGGTCTT  250

seq1  TTGAAGGTTTGATGCCCCAGTGTAAGGGAATGCTAAGGCTGTGAGGCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGGTTTGATGCCCCAGTGTAAGGGAATGCTAAGGCTGTGAGGCAGG  300

seq1  AGTGGGTGGGTGGCAGAGCACTCTCATAGAAGCAGTAGGGAGGGGGGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGTGGGTGGCAGAGCACTCTCATAGAAGCAGTAGGGAGGGGGGAGG  350

seq1  GAAGATGGGATTTGCAGAGGGGAAACTAGGAAAGGGGATAACATTTGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATGGGATTTGCAGAGGGGAAACTAGGAAAGGGGATAACATTTGAAA  400

seq1  TGTAAACAAATAAAATATCCAATTTAAAAAAATACTGTTCTCTATCAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAACAAATAAAATATCCAATTTAAAAAAATACTGTTCTCTATCAAGT  450

seq1  AAAATTGACATCATAGATTTTTTTTTTATTATGTTCACTTTCTTTCTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTGACATCATAGATTTTTTTTTTATTATGTTCACTTTCTTTCTGAA  500

seq1  ACTTTTCTAACTGGAAATAGCATCTCCACTGGAATCATACATGTACACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTCTAACTGGAAATAGCATCTCCACTGGAATCATACATGTACACTT  550

seq1  AATAATATATCTGTAAATAGTGAAGAATTAGTAAACTGCCAAG-TTAATT  599
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AATAATATATCTGTAAATAGTGAAGAATTAGTAAACTGCCAAGTTTAATT  600

seq1  AATTTAATGAAGATGCACCTG-TAACTATTGCATAGTCTTAAGACTTGAT  648
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AATTTAATGAAGATGCACCTGTTAACTATTGCATAGTCTTAAGACTTGAT  650

seq1  CATCCTGAGTGAGGTAACCCAAACAC-AAAAGAACACACATGTTATGCAC  697
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CATCCTGAGTGAGGTAACCCAAACACAAAAAGAACACACATGTTATGCAC  700

seq1  TCACTGGTAAGTGAATATTAGCCCAGAAGCTCAGAATACCCAA-TATACA  746
      ||||||||||||||||||||| ||||||||||||||||||||| ||||||
seq2  TCACTGGTAAGTGAATATTAGTCCAGAAGCTCAGAATACCCAATTATACA  750

seq1  ATTCACAT  754
      ||||||||
seq2  ATTCACAT  758


seq1: chr14_114912979_114914133
seq2: B6Ng01-289C09.g_68_1245 (reverse)

seq1  GTGTACCT---GGAAGGAT-CTCCAG--ATACATATGTAGCAGAGGATGG  44
      ||||||||   | |||||| ||||||  ||||||||||||||| | ||||
seq2  GTGTACCTTGGGAAAGGATACTCCAGGTATACATATGTAGCAGGGAATGG  50

seq1  CCTTGCCTGACAGCAATGGGAGGGGAGGCCCTTGGTTCAGAGGTTTAATA  94
      ||| ||||||||||||||||| |||||| |||||||||||||| || |||
seq2  CCTGGCCTGACAGCAATGGGAAGGGAGGTCCTTGGTTCAGAGGGTT-ATA  99

seq1  CCCAAGCATAGAAGGATGCTGGA-GTAGTTGAGT-CAGAGAGAGGGTGGG  142
      |||||||||||| |  ||||||| |||||||||| |||||||||||| ||
seq2  CCCAAGCATAGAGGATTGCTGGAGGTAGTTGAGTCCAGAGAGAGGGT-GG  148

seq1  TGGGGGAGCACCCTCATGCAGGCAAAGGGGA-GAGGGG--AGGGCAGATG  189
      ||||||||||||||||||||||||||||||| ||||||  ||||||||||
seq2  TGGGGGAGCACCCTCATGCAGGCAAAGGGGAGGAGGGGGAAGGGCAGATG  198

seq1  T--GGAATGGGGATTTGGTGGAGGGATAA-CTGG-AAAGT-GGGTTATCA  234
      |  | |||||||||||||||||||||||| |||| ||||| |||||||||
seq2  TTGGAAATGGGGATTTGGTGGAGGGATAACCTGGAAAAGTGGGGTTATCA  248

seq1  TTTGAGATGTAAA-CGAATGGAATGA-TTAATAAAAAAT-AACTATAT-A  280
      ||||||||||||| |||||||||||| |||||||||||| |||||||| |
seq2  TTTGAGATGTAAACCGAATGGAATGATTTAATAAAAAATAAACTATATAA  298

seq1  AATATATTTAGCAACAC-TTTTGTAATAGTAATGGTCATT-AAAATCT-A  327
      ||||||||||||||||| |||||||||||||||||||||| ||||||| |
seq2  AATATATTTAGCAACACTTTTTGTAATAGTAATGGTCATTAAAAATCTAA  348

seq1  AATATGCAAAAGAAATTCAGCTATACAGTAGAGTTAAAGTAGTATTAAAA  377
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGCAAAAGAAATTCAGCTATACAGTAGAGTTAAAGTAGTATTAAAA  398

seq1  TGGGTTATATATAATTACATGAAAATATATCCATTTTTATGTACACATAA  427
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTATATATAATTACATGAAAATATATCCATTTTTATGTACACATAA  448

seq1  AGTTATATTGTATATATAAAGTTACAAAGCATTGTATATAGGATG-AATA  476
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AGTTATATTGTATATATAAAGTTACAAAGCATTGTATATAGGATGAAATA  498

seq1  AACCTCTAGACAAACTAAAGAAAGAGAGAGAATCATAAAATTATTTTTAA  526
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCTAGACAAACTAAAGAAAGAGAGAGAATCATAAAATTATTTTTAA  548

seq1  ATTCCTAGTTTATGCAAAAATAGAAGATCATTCTGATATTCAAAGCAGTT  576
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTAGTTTATGCAAAAATAGAAGATCATTCTGATATTCAAAGCAGTT  598

seq1  GAAAGAACTGTGAATTCTTAGTGATGTCGAGTAGAGAGAGTAGATGTTCA  626
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAACTGTGAATTCTTAGTGATGTCGAGTAGAGAGAGTAGATGTTCA  648

seq1  AGGACCCCATGTCAGTGCTCTGCACTTGCGTTCCCATTTCCTAAACTGAA  676
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCCCATGTCAGTGCTCTGCACTTGCGTTCCCATTTCCTAAACTGAA  698

seq1  TTCTTGTCTTAGAAAAGTCATTGATTATTTAATGTTTGTCAACCAATTCC  726
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTCTTAGAAAAGTCATTGATTATTTAATGTTTGTCAACCAATTCC  748

seq1  GATTAGAGAATACCCAGGAAGGTGAATATGCATTTCTCAGAGGATTAAAA  776
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAGAGAATACCCAGGAAGGTGAATATGCATTTCTCAGAGGATTAAAA  798

seq1  AGCTACAGGAACAGAGTGAGGATCTTGGATTAGGCGGTGCTAAACTGAGC  826
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACAGGAACAGAGTGAGGATCTTGGATTAGGCGGTGCTAAACTGAGC  848

seq1  ATCTTCAGAGACTTTGTTCACCCACTTTGATAAAGTTAAAATATAAACAC  876
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCAGAGACTTTGTTCACCCACTTTGATAAAGTTAAAATATAAACAC  898

seq1  ACAGCATAGAACATAGAGCAAACACCATTTTCTTTTTTATTTTAGTTACT  926
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCATAGAACATAGAGCAAACACCATTTTCTTTTTTATTTTAGTTACT  948

seq1  AATTTTTTATGCCAATACATAGTATTAGTTTTTTCAGATAAAACATCCAT  976
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTTATGCCAATACATAGTATTAGTTTTTTCAGATAAAACATCCAT  998

seq1  ATATGTGGTCCCCAGTCAAGCACAGGCCTTGAACCCCAGTGACCCTAAGG  1026
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTGGTCCCCAGTCAAGCACAGGCCTTGAACCCCAGTGACCCTAAGG  1048

seq1  GACAGCAGGTGTTCTGCCACACCTCCTCGGCCCCTGGCTCCTGTCACAGC  1076
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCAGGTGTTCTGCCACACCTCCTCGGCCCCTGGCTCCTGTCACAGC  1098

seq1  TACTGCCTCCCACAGCTCCCCCACAGATATAATATGTGTCCATCAGTCAT  1126
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCCTCCCACAGCTCCCCCACAGATATAATATGTGTCCATCAGTCAT  1148

seq1  GTAGGCAATGC-CCCAAGCTCCTGGAATTC  1155
      |||||||||||  |||||||||||||||||
seq2  GTAGGCAATGCAACCAAGCTCCTGGAATTC  1178


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