BAC Information

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BAC

Clone NameB6Ng01-289G11
Chromosome14 (Build37)
Map Location 78,321,741 - 78,461,673
singlet/doubletdoublet
Overlap geneEpsti1
Upstream geneLOC100043201, 9030625A04Rik, Ccdc122, D230005D02Rik, LOC100043755, LOC676171, EG629678, Gm1587, Dnajc15
Downstream geneAU021034, Tnfsf11, LOC219180, Akap11, Dgkh, LOC673649, 1300010F03Rik, LOC629709
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-289G11.bB6Ng01-289G11.g
ACCGA086816GA086817
length1,0311,095
definitionB6Ng01-289G11.b B6Ng01-289G11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(78,460,651 - 78,461,673)(78,321,741 - 78,322,833)
sequence
gaattccatgtctcaacaccctgacacttcttggagggtagcttccggta
ttagtggaagaagctaaaaccagggaattccaactaggatattaagtctt
ttcctggagagacccaaaggtggtgtcttaggagcaggaaaggccttatg
tctacatttcattttttgagatgtgttaagaaatgtggcaaaggaatgcc
caaacaaaaggcacacactgctgatgaaatacccacaaatgtacatacat
atacatggattcatacatatatgcacatgcatgcaccttttcacagtcag
gttcacatctgccttattcacactgatggccaaatatttgggggatttgc
atctggaagctttcctctagcctttgtgttcactcccctcacacctttgt
taaagcaatggttaactttctgaagacagtaaacaaggtgctattgcatg
cctgaaatgctccaccctgccttcagtccctcattctgaacatggctcac
tagctccatctaaaagcttcagtgctctttacatggtctctttcatgcac
atacatacatacatacatacatacatacatacatacatacatggatgcat
gtatacttggatacagacagacagacagacagacagacagacagacacac
acacacacacacacacacacacacacactgaatacttgccaaacgcttca
tgcataaacacctgcttgcatgcttgactgtacatcacccttactctttg
gtgacagcattcagtgccttctattcaatgatcatctacttatctgtccc
ctcctactctgccctgagagcatcaccctaactaggaaaaaaaatggttt
cttccttccttttctttcttccttttttttcagtttgttctcattcacca
aatagagcctagaaaacaggtaaataaaacccagtgagtgaacaaacggg
aacgagcctgttcttgctctttgcccttaaggtacatgggtcaccctata
acgttcattcttcccgggtaaccccccactc
gaattcacatcctgatgtttgcacagcagacatttgacttcctgagcctc
ctcccaagtctcccttcctctttaaaaatggcagagaaaagatctttatc
tttgccttagactgttgtctcctaggcctatctctgtctcatggaagcgc
actgctggaaattggaaaccatcttaccaacagacatttcattaaatttc
aatgagataattaaggaaactcattttcaaaaatatatatttgtttcggc
agtttgcatgttgcttcgttaggaagtgaccagaatgctaaatctatgca
gtttgagtttgttgcatctgcagctcctgactccactcggcgaaggaaat
gccacggagctaaatggcaaaggtctgctgtgggtgggaactaattggtt
gagaacattaataaattatactggctattcatgtaaaaaaaaagttcaga
gggaagagatgaatatttttgatctctcagggacttgcactctgccacac
aatattaaaaataaaaagcatagccttagacttaagcgcctcttcctact
gcaaaaaggagagataaaaagtaaatcacttggcagtgctttcctatatt
aagatgtcttccgtttggcatttcagccaataaaatattgctaaggcatc
ctctcacataaaatgcgtattactaggaccactgttagtgttaggcgaaa
aggcttttgattaaaatcctttactttcagggttcgctagctctctcttc
tctcttttcccatttacaatatgtatgggtactgcagccctgttccaggg
cagtttctcagacgtgggggccagagagggagaaagatgtaaataaacct
atcctgttttgtgtgcatcgaatagtaagtgttttatctctgacccagaa
gtctcatgtcagctgtgactgacaaatgccactgggtctgtctcatcaga
cttaatcagggttagagattataaagtacagtctttagtaaccagatctc
cccttcaactcttcttctgtaatttggtataagcagatggtgggctgggg
aaattcccagtgaatttttcttagcaactcgtttgccggtgactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_78460651_78461673
seq2: B6Ng01-289G11.b_42_1072 (reverse)

seq1  GAGT-GGGGGTTA-CCGGGAAG-ATGAACG-TATAGGGTGA-CCATGTAC  45
      |||| |||||||| |||||||| ||||||| |||||||||| ||||||||
seq2  GAGTGGGGGGTTACCCGGGAAGAATGAACGTTATAGGGTGACCCATGTAC  50

seq1  C-TAAGGGC-AAGAGCAAGAACAGGCTCGTT-CCGTTTGTTCACTCACTG  92
      | ||||||| ||||||||||||||||||||| ||||||||||||||||||
seq2  CTTAAGGGCAAAGAGCAAGAACAGGCTCGTTCCCGTTTGTTCACTCACTG  100

seq1  GGTTTTATTTACCTGTTTTCTAGGCTCTATTTGGTGAATGAGAACAAACT  142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTATTTACCTGTTTTCTAGGCTCTATTTGGTGAATGAGAACAAACT  150

seq1  GAAAAAAAAGGAAGAAAGAAAAGGAAGGAAGAAACCATTTTTTTTCCTAG  192
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAAAGGAAGAAAGAAAAGGAAGGAAGAAACCATTTTTTTTCCTAG  200

seq1  TTAGGGTGATGCTCTCAGGGCAGAGTAGGAGGGGACAGATAAGTAGATGA  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGTGATGCTCTCAGGGCAGAGTAGGAGGGGACAGATAAGTAGATGA  250

seq1  TCATTGAATAGAAGGCACTGAATGCTGTCACCAAAGAGTAAGGGTGATGT  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGAATAGAAGGCACTGAATGCTGTCACCAAAGAGTAAGGGTGATGT  300

seq1  ACAGTCAAGCATGCAAGCAGGTGTTTATGCATGAAGCGTTTGGCAAGTAT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCAAGCATGCAAGCAGGTGTTTATGCATGAAGCGTTTGGCAAGTAT  350

seq1  TCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTCTGTCTGTC  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTCTGTCTGTC  400

seq1  TGTCTGTCTGTCTGTCTGTATCCAAGTATACATGCATCCATGTATGTATG  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTCTGTCTGTCTGTATCCAAGTATACATGCATCCATGTATGTATG  450

seq1  TATGTATGTATGTATGTATGTATGTATGTATGTGCATGAAAGAGACCATG  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATGTATGTATGTATGTATGTATGTATGTGCATGAAAGAGACCATG  500

seq1  TAAAGAGCACTGAAGCTTTTAGATGGAGCTAGTGAGCCATGTTCAGAATG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAGCACTGAAGCTTTTAGATGGAGCTAGTGAGCCATGTTCAGAATG  550

seq1  AGGGACTGAAGGCAGGGTGGAGCATTTCAGGCATGCAATAGCACCTTGTT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACTGAAGGCAGGGTGGAGCATTTCAGGCATGCAATAGCACCTTGTT  600

seq1  TACTGTCTTCAGAAAGTTAACCATTGCTTTAACAAAGGTGTGAGGGGAGT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTCTTCAGAAAGTTAACCATTGCTTTAACAAAGGTGTGAGGGGAGT  650

seq1  GAACACAAAGGCTAGAGGAAAGCTTCCAGATGCAAATCCCCCAAATATTT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACAAAGGCTAGAGGAAAGCTTCCAGATGCAAATCCCCCAAATATTT  700

seq1  GGCCATCAGTGTGAATAAGGCAGATGTGAACCTGACTGTGAAAAGGTGCA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATCAGTGTGAATAAGGCAGATGTGAACCTGACTGTGAAAAGGTGCA  750

seq1  TGCATGTGCATATATGTATGAATCCATGTATATGTATGTACATTTGTGGG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGTGCATATATGTATGAATCCATGTATATGTATGTACATTTGTGGG  800

seq1  TATTTCATCAGCAGTGTGTGCCTTTTGTTTGGGCATTCCTTTGCCACATT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCATCAGCAGTGTGTGCCTTTTGTTTGGGCATTCCTTTGCCACATT  850

seq1  TCTTAACACATCTCAAAAAATGAAATGTAGACATAAGGCCTTTCCTGCTC  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAACACATCTCAAAAAATGAAATGTAGACATAAGGCCTTTCCTGCTC  900

seq1  CTAAGACACCACCTTTGGGTCTCTCCAGGAAAAGACTTAATATCCTAGTT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGACACCACCTTTGGGTCTCTCCAGGAAAAGACTTAATATCCTAGTT  950

seq1  GGAATTCCCTGGTTTTAGCTTCTTCCACTAATACCGGAAGCTACCCTCCA  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTCCCTGGTTTTAGCTTCTTCCACTAATACCGGAAGCTACCCTCCA  1000

seq1  AGAAGTGTCAGGGTGTTGAGACATGGAATTC  1023
      |||||||||||||||||||||||||||||||
seq2  AGAAGTGTCAGGGTGTTGAGACATGGAATTC  1031

seq1: chr14_78321741_78322833
seq2: B6Ng01-289G11.g_68_1162

seq1  GAATTCACATCCTGATGTTTGCACAGCAGACATTTGACTTCCTGAGCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATCCTGATGTTTGCACAGCAGACATTTGACTTCCTGAGCCTC  50

seq1  CTCCCAAGTCTCCCTTCCTCTTTAAAAATGGCAGAGAAAAGATCTTTATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAAGTCTCCCTTCCTCTTTAAAAATGGCAGAGAAAAGATCTTTATC  100

seq1  TTTGCCTTAGACTGTTGTCTCCTAGGCCTATCTCTGTCTCATGGAAGCGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTTAGACTGTTGTCTCCTAGGCCTATCTCTGTCTCATGGAAGCGC  150

seq1  ACTGCTGGAAATTGGAAACCATCTTACCAACAGACATTTCATTAAATTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTGGAAATTGGAAACCATCTTACCAACAGACATTTCATTAAATTTC  200

seq1  AATGAGATAATTAAGGAAACTCATTTTCAAAAATATATATTTGTTTCGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGATAATTAAGGAAACTCATTTTCAAAAATATATATTTGTTTCGGC  250

seq1  AGTTTGCATGTTGCTTCGTTAGGAAGTGACCAGAATGCTAAATCTATGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGCATGTTGCTTCGTTAGGAAGTGACCAGAATGCTAAATCTATGCA  300

seq1  GTTTGAGTTTGTTGCATCTGCAGCTCCTGACTCCACTCGGCGAAGGAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAGTTTGTTGCATCTGCAGCTCCTGACTCCACTCGGCGAAGGAAAT  350

seq1  GCCACGGAGCTAAATGGCAAAGGTCTGCTGTGGGTGGGAACTAATTGGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACGGAGCTAAATGGCAAAGGTCTGCTGTGGGTGGGAACTAATTGGTT  400

seq1  GAGAACATTAATAAATTATACTGGCTATTCATGTAAAAAAAAAGTTCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACATTAATAAATTATACTGGCTATTCATGTAAAAAAAAAGTTCAGA  450

seq1  GGGAAGAGATGAATATTTTTGATCTCTCAGGGACTTGCACTCTGCCACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGAGATGAATATTTTTGATCTCTCAGGGACTTGCACTCTGCCACAC  500

seq1  AATATTAAAAATAAAAAGCATAGCCTTAGACTTAAGCGCCTCTTCCTACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTAAAAATAAAAAGCATAGCCTTAGACTTAAGCGCCTCTTCCTACT  550

seq1  GCAAAAAGGAGAGATAAAAAGTAAATCACTTGGCAGTGCTTTCCTATATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAAGGAGAGATAAAAAGTAAATCACTTGGCAGTGCTTTCCTATATT  600

seq1  AAGATGTCTTCCGTTTGGCATTTCAGCCAATAAAATATTGCTAAGGCATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGTCTTCCGTTTGGCATTTCAGCCAATAAAATATTGCTAAGGCATC  650

seq1  CTCTCACATAAAATGCGTATTACTAGGACCACTGTTAGTGTTAGGCGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCACATAAAATGCGTATTACTAGGACCACTGTTAGTGTTAGGCGAAA  700

seq1  AGGCTTTTGATTAAAATCCTTTACTTTCAGGGTTCGCTAGCTCTCTCTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTTTGATTAAAATCCTTTACTTTCAGGGTTCGCTAGCTCTCTCTTC  750

seq1  TCTCTTTTCCCATTTACAATATGTATGGGTACTGCAGCCCTGTTCCAGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTTCCCATTTACAATATGTATGGGTACTGCAGCCCTGTTCCAGGG  800

seq1  CAGTTTCTCAGACGT-GGGGCCAGAGAGGGAGAAAGATGTAAATAAACCT  849
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CAGTTTCTCAGACGTGGGGGCCAGAGAGGGAGAAAGATGTAAATAAACCT  850

seq1  ATCCTGTTTTGTGTGCATCGAATAGTAAGTGTTTTATCTCTGACCCAGAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGTTTTGTGTGCATCGAATAGTAAGTGTTTTATCTCTGACCCAGAA  900

seq1  GTCTCATGTCAGCTGTGACTGACAAATGCCACT-GGTCTGTCTCATCAGA  948
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GTCTCATGTCAGCTGTGACTGACAAATGCCACTGGGTCTGTCTCATCAGA  950

seq1  CTTAATCA-GGTTAGAGATTATAAAGTACAGTCTTTAGTAACCAGATCTC  997
      |||||||| |||||||||||||||||||||||||||||||||||||||| 
seq2  CTTAATCAGGGTTAGAGATTATAAAGTACAGTCTTTAGTAACCAGATCT-  999

seq1  CCCCTCCAACTC-TCTTCTGTAATTT-GTATAAGCAGAATGGTGGGCTTG  1045
      ||||| |||||| ||||||||||||| |||||||||| ||||||||| ||
seq2  CCCCTTCAACTCTTCTTCTGTAATTTGGTATAAGCAG-ATGGTGGGC-TG  1047

seq1  GGAAAATTCCCAGTGAAATATTCTTAGCAAACTCGTTTGCC-GTGACTT  1093
      || |||||||||||||| | |||||||| |||||||||||| |||||||
seq2  GGGAAATTCCCAGTGAATTTTTCTTAGC-AACTCGTTTGCCGGTGACTT  1095