BAC Information

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BAC

Clone NameB6Ng01-290I05
Chromosome14 (Build37)
Map Location 53,621,208 - 53,622,287
singlet/doubletsinglet
Overlap geneEG667583
Upstream geneE130112L23Rik, Zfp219, G630016D24Rik, LOC100042276, Olfr221, LOC667348, LOC667352, Hnrpc, Rpgrip1, Supt16h, Chd8, Rab2b, Tox4, Mettl3, Sall2, Olfr1513, LOC193533, Olfr1512, Olfr1511, Olfr1510, OTTMUSG00000015242, Olfr1509, Olfr1508, Olfr1507, LOC671621, EG633692, LOC100042372, EG667441, LOC100042384, Trav5-1, EG667449, LOC671652, Trav6-2, LOC100042410, LOC546612, LOC627394, LOC100042419, Gm701, LOC382180, EG386506, LOC667476, LOC671927, LOC667481, LOC100042444, LOC640196, LOC627273, LOC100043177, LOC640931, EG627232, LOC100043186, LOC100042470, EG328482, LOC100042479, EG667525, LOC100043197, LOC100038850, LOC667542, EG667547, LOC100043214, EG667562, LOC100043202, LOC667574, Gm26
Downstream geneGm1489, C920008G01Rik, LOC667596, EG667604, LOC547329, LOC639655, LOC634322, EG636127, OTTMUSG00000015163, EG667626, LOC620297, LOC100042560, EG667635, LOC100043218, LOC100042568, LOC100043204, EG627424, LOC100043258, LOC100042574, LOC100042579, LOC100043269, LOC100043270, LOC100043274, EG667681, LOC100042593, EG193574, EG547424, LOC100042601, LOC100043282, A130082M07Rik, LOC100042607, LOC100042614, LOC100042621, LOC100043319, EG547328, LOC100043308, LOC328483, EG667765, EG630061, LOC630086, EG436467, LOC100043322, OTTMUSG00000015124, A430107P09Rik, OTTMUSG00000015049, LOC100043325, A730076H11Rik, LOC627777
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-290I05.bB6Ng01-290I05.g
ACCGA087638GA087639
length1,0581,151
definitionB6Ng01-290I05.b B6Ng01-290I05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacttctttgtgtgctgattctgaaggcttgtgacagaagcaaag
cctatttctcagtggctgaggtgactccagaggtagaattgtcactgaga
aagaacaacatcctgagagttatagctgacctgctagtcaccacagtctc
ttctggattttaatttaattgggaagagcaatgaaaacatatgctcctac
attattcatgtttctatggctgcagctggatggtgagttaatatctgaag
gccatagaacaatcagggggcatttctgagacacccagggggaaactcta
ttcaggtttattctagttactctagaaaaagagactcctggaaagggggt
gacctcacagcctttctcctttttttttttttttttttttgtcccatctt
tctgcatagggatgagccaaggtgagcaggtggagcagcttccttccatc
ctgagagtccaggagggatccagtgccagcatcaactgcacttatgagaa
cagtgcctccaactacttcccttggtataagcaagaacctggagagaatc
ctaagctcatcattgacattcgttcaaatatggaaagaaagcagacccaa
ggactcatcgttttactggataagaaagccaaacgcttctccctgcacat
cacagacacccagcctggagactcagccatgtacttctgtgctgcaagtg
cacactgctccacgggcacctgcagtctgtcctcaaacctgccatggggc
ctggagcctcatctacatcctgtgtcacaggccttccaaggaagcatttg
ccagttgttagttttaggtgccaactaatatagacattaaaaatacaaaa
taagaatgttaatgtcaagtcactcaaaacaatttaggacaattttctcc
attttaaaaatttattttaaaaattaaaatataattttgttgcaagtagt
tcacatacttcgcagacggtggctgtactacacccactctggctcctttt
gtcacttgctagctggttgatgcacagcactggcctgctctttctacatc
ttgctccg
gaattcctgttctcccaccccctttatttccccaggagcgctgccccacg
ttttctcaaggtcatgacatggattctgtatataaaactacagcagaact
tggcagttgtgtgtttcccacatggaactgattttgaaaatgtgaaggga
cgtaaaaatactatttgggctcaatgcttggtaggatcagaatctgcctg
aagagaggctattggtaaaggtgctatctcaattgtactggaaaccatga
catcgaagatcccaggaccatgaaatgaccaagaacactggcaggtatag
attgtagccagactgaacccatggtagaactgcccaagccctgtggagcc
caaaaaaactccaagtgagttccagaccctgaaaccctgagctctttgca
ctgttgggttttgtttttgcatttatctaattgcaactgtgtctgattct
tccctgttagaataagaaggacaattgagaaacttcaggcttttaaaaag
acttttgatattttatcgtcttctgtgaaccttaacttttaacatctgag
cttcagctcaggttagatttttttttttaacagactgaacttttaaaatg
tttaaattttttaaagattgtgggactttaaaaagtttaaattcttatat
tagcatcagatattgggaggataataaagtttaccatgtaatagtgatgc
atttgtgtgtcaagttgtcgaggggtaaactttactgggtagtttctgtc
aatttaaaacaagctagctccggggcggtggtggcgcacacctttaatcc
cagcacttgggaggcagaggcaggcagatttctgagttcgaggccagtct
ggtctacaaagtgagtgccaggaacagccagggctacacagagaaaaccc
tggtctcgaaaaaaaaaaaaaaacccaaacccaaatcaacctaaagcaaa
ataactgaaataccatacaactacaacaaaagctcagctagcatcatctg
gaccagatgaaatgtcaacttgagatttttccctccattcagaattaatc
tggtgggcattgtcttatggggcattgttctgatatgattgggtgtggta
ggccacacttgtgggaagttacccctcgctagacagatatggtcctgctg
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_53621208_53622287
seq2: B6Ng01-290I05.b_44_1101

seq1  GAATTCACTTCTTTGTGTGCTGATTCTGAAGGCTTGTGACAGAAGCAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTCTTTGTGTGCTGATTCTGAAGGCTTGTGACAGAAGCAAAG  50

seq1  CCTATTTCTCAGTGGCTGAGGTGACTCCAGAGGTAGAATTGTCACTGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTTCTCAGTGGCTGAGGTGACTCCAGAGGTAGAATTGTCACTGAGA  100

seq1  AAGAACAACATCCTGAGAGTTATAGCTGACCTGCTAGTCACCACAGTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACAACATCCTGAGAGTTATAGCTGACCTGCTAGTCACCACAGTCTC  150

seq1  TTCTGGATTTTAATTTAATTGGGAAGAGCAATGAAAACATATGCTCCTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGATTTTAATTTAATTGGGAAGAGCAATGAAAACATATGCTCCTAC  200

seq1  ATTATTCATGTTTCTATGGCTGCAGCTGGATGGTGAGTTAATATCTGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTCATGTTTCTATGGCTGCAGCTGGATGGTGAGTTAATATCTGAAG  250

seq1  GCCATAGAACAATCAGGGGGCATTTCTGAGACACCCAGGGGGAAACTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATAGAACAATCAGGGGGCATTTCTGAGACACCCAGGGGGAAACTCTA  300

seq1  TTCAGGTTTATTCTAGTTACTCTAGAAAAAGAGACTCCTGGAAAGGGGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGTTTATTCTAGTTACTCTAGAAAAAGAGACTCCTGGAAAGGGGGT  350

seq1  GACCTCACAGCCTTTCTCCTTTTTTTTTTTTTTTTTTTTTGTCCCATCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTCACAGCCTTTCTCCTTTTTTTTTTTTTTTTTTTTTGTCCCATCTT  400

seq1  TCTGCATAGGGATGAGCCAAGGTGAGCAGGTGGAGCAGCTTCCTTCCATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCATAGGGATGAGCCAAGGTGAGCAGGTGGAGCAGCTTCCTTCCATC  450

seq1  CTGAGAGTCCAGGAGGGATCCAGTGCCAGCATCAACTGCACTTATGAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAGTCCAGGAGGGATCCAGTGCCAGCATCAACTGCACTTATGAGAA  500

seq1  CAGTGCCTCCAACTACTTCCCTTGGTATAAGCAAGAACCTGGAGAGAATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCCTCCAACTACTTCCCTTGGTATAAGCAAGAACCTGGAGAGAATC  550

seq1  CTAAGCTCATCATTGACATTCGTTCAAATATGGAAAGAAAGCAGACCCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCTCATCATTGACATTCGTTCAAATATGGAAAGAAAGCAGACCCAA  600

seq1  GGACTCATCGTTTTACTGGATAAGAAAGCCAAACGCTTCTCCCTGCACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCATCGTTTTACTGGATAAGAAAGCCAAACGCTTCTCCCTGCACAT  650

seq1  CACAGACACCCAGCCTGGAGACTCAGCCATGTACTTCTGTGCTGCAAGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGACACCCAGCCTGGAGACTCAGCCATGTACTTCTGTGCTGCAAGTG  700

seq1  CACACTGCTCCACGGGCACCTGCAGTCTGTCCTCAAACCTGCCATGGGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTGCTCCACGGGCACCTGCAGTCTGTCCTCAAACCTGCCATGGGGC  750

seq1  CTGGAGCCTCATCTACATCCTGTGTCACAGGCCTTCCAAGGAAGCATTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGCCTCATCTACATCCTGTGTCACAGGCCTTCCAAGGAAGCATTTG  800

seq1  CCAGTTGTTAGTTTTAGGTGCCAACTAATATAGACATTAAAAATACAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTGTTAGTTTTAGGTGCCAACTAATATAGACATTAAAAATACAAAA  850

seq1  TAAGAATGTTAATGTCAAGTCACTCAAAACAATTTAGGACAATTTTCTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAATGTTAATGTCAAGTCACTCAAAACAATTTAGGACAATTTTCTCC  900

seq1  ATTTTAAAAATTTATTTTAAAAATTAAAATATAATTTTGTTGCAAGTAGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAAAATTTATTTTAAAAATTAAAATATAATTTTGTTGCAAGTAGT  950

seq1  TCACATACTTTCCGCAGGACGGTGGCTGTACTACCAACCCACTCCTGGCT  1000
      ||||||||||  |||| |||||||||||||||||  ||||||| ||||||
seq2  TCACATACTT--CGCA-GACGGTGGCTGTACTAC--ACCCACT-CTGGCT  994

seq1  CCCTTTTGTTCCACTTTGCTTAGCTGGGTTGATGCCACCAGCACTGGCCT  1050
       ||||||||  ||| |||| ||||| |||||||||   ||||||||||||
seq2  -CCTTTTGT--CAC-TTGC-TAGCT-GGTTGATGC--ACAGCACTGGCCT  1036

seq1  GGCTTCTCTTTCTTACCCATCTTTGCTCCG  1080
      |    ||||||||    |||| ||||||||
seq2  G----CTCTTTCT---ACATC-TTGCTCCG  1058