MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-291A07
Chromosome	14 (Build37)
Map Location	25,710,741 - 25,835,807
singlet/doublet	doublet
Overlap gene	none
Upstream gene	Kcnma1, LOC620499, Dlg5, LOC100039335, E330034G19Rik, LOC669325, Polr3a, Rps24, LOC669315
Downstream gene	LOC100039411, Zmiz1, I920194n01, LOC100039007, 4931406H21Rik, Ppif, 2310047A01Rik, Anxa11, Plac9, D14Ertd449e, Cphx, 1110051B16Rik, LOC100039468, LOC100039484
Link	Open Mouse BAC browser

Click to get alignment info.

name	Kcnma1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16531 MGI:99923
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC620499 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620499
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 95 ESTs, 3 Proteins

name	Dlg5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71228 MGI:1918478
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 177 ESTs, 3 Proteins

name	LOC100039335 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039335
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	E330034G19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:105418 MGI:2145557
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC669325 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:669325
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	Polr3a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218832 MGI:2681836
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rps24 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20088 MGI:98147
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	LOC669315 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:669315
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	LOC100039411 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039411
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Zmiz1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:328365 MGI:3040693
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	I920194n01 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:328364
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC100039007 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039007
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	4931406H21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77592 MGI:1924842
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppif (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:105675 MGI:2145814
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310047A01Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71918 MGI:1919168
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 134 ESTs, 2 Proteins

name	Anxa11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11744 MGI:108481
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Plac9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:211623 MGI:2663998
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D14Ertd449e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66039 MGI:1196450
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cphx (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:105594 MGI:2145733
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1110051B16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:278672 MGI:1916048
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039468 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039468
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins

name	LOC100039484 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039484
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 44 ESTs, 3 Proteins

name	Kcnma1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111607491 GeneID:16531 MGI:99923
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium large conductance calcium-activated channel, subfamily M, alpha member 1 transcript_id : NM_010610.2

name	LOC620499 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265250 GeneID:620499
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 95 ESTs, 3 Proteins product : similar to hCG1782167 transcript_id : XM_001472641.1

name	Dlg5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94396719 GeneID:71228 MGI:1918478
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 173 ESTs, 2 Proteins product : discs, large homolog 5 (Drosophila), transcript variant 2 transcript_id : XM_977694.1

name	Dlg5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94396721 GeneID:71228 MGI:1918478
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 176 ESTs, 2 Proteins product : discs, large homolog 5 (Drosophila), transcript variant 1 transcript_id : XM_907765.2

name	E330034G19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367336 GeneID:105418 MGI:2145557
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA E330034G19 gene transcript_id : NM_001033214.2

name	LOC669325 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265260 GeneID:669325
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : hypothetical LOC669325 transcript_id : XM_001474368.1

name	Polr3a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486962 GeneID:218832 MGI:2681836
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : polymerase (RNA) III (DNA directed) polypeptide A transcript_id : NM_001081247.1

name	Rps24 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46519159 GeneID:20088 MGI:98147
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein S24 transcript_id : NM_207635.1

name	Rps24 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46519155 GeneID:20088 MGI:98147
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein S24 transcript_id : NM_011297.2

name	Rps24 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46519157 GeneID:20088 MGI:98147
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein S24 transcript_id : NM_207634.1

name	LOC669315 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265351 GeneID:669315
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : similar to C33G8.2 transcript_id : XM_001472822.1

name	Zmiz1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:41053863 GeneID:328365 MGI:3040693
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, MIZ-type containing 1 transcript_id : NM_183208.2

name	I920194n01 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265325 GeneID:328364
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : RIKEN cDNA I920194N01gene transcript_id : XM_001472051.1

name	LOC100039007 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265323 GeneID:100039007
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100039007 transcript_id : XM_001472026.1

name	4931406H21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350685 GeneID:77592 MGI:1924842
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4931406H21 gene transcript_id : NM_175264.3

name	Ppif (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19527309 GeneID:105675 MGI:2145814
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : peptidylprolyl isomerase F (cyclophilin F) transcript_id : NM_134084.1

name	2310047A01Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149265327 GeneID:71918 MGI:1919168
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 134 ESTs, 2 Proteins product : RIKEN cDNA 2310047A01 gene transcript_id : XM_975187.2

name	Anxa11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7304884 GeneID:11744 MGI:108481
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : annexin A11 transcript_id : NM_013469.1

name	Plac9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46402208 GeneID:211623 MGI:2663998
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : placenta specific 9 transcript_id : NM_207229.1

name	D14Ertd449e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21313631 GeneID:66039 MGI:1196450
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 14, ERATO Doi 449, expressed transcript_id : NM_025311.1

name	Cphx (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802126 GeneID:105594 MGI:2145733
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytoplasmic polyadenylated homeobox transcript_id : NM_175342.3

name	1110051B16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34419644 GeneID:278672 MGI:1916048
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1110051B16 gene transcript_id : NM_183389.1

name	LOC100039468 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265353 GeneID:100039468
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins product : similar to Ubtf protein transcript_id : XM_001472941.1

name	LOC100039484 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265355 GeneID:100039484
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 44 ESTs, 3 Proteins product : similar to Annexin A11 transcript_id : XM_001472963.1

name	Kcnma1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111607492 GeneID:16531 MGI:99923
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0008076 - voltage-gated potassium channel complex [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0015269 - calcium-activated potassium channel activity [Evidence IDA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005267 - potassium channel activity [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA]; GO:0005249 - voltage-gated potassium channel activity [Evidence IDA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : BK channel alpha subunit product : large conductance calcium-activated potassium channel subfamily M alpha member 1 protein_id : NP_034740.2

name	LOC620499 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265251 GeneID:620499
definition	codon_start : 1 product : similar to hCG1782167 protein_id : XP_001472691.1

name	Dlg5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94396722 GeneID:71228 MGI:1918478
definition	codon_start : 1 product : discs large homolog 5 isoform 1 protein_id : XP_912858.2

name	Dlg5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94396720 GeneID:71228 MGI:1918478
definition	codon_start : 1 product : discs large homolog 5 isoform 2 protein_id : XP_982788.1

name	E330034G19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701716 GeneID:105418 MGI:2145557
definition	codon_start : 1 product : hypothetical protein LOC105418 protein_id : NP_001028386.1

name	LOC669325 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265261 GeneID:669325
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474418.1

name	Polr3a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486963 GeneID:218832 MGI:2681836
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed RNA polymerase activity [Evidence IEA] GO_process : GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : polymerase (RNA) III (DNA directed) polypeptide A, 155kDa protein_id : NP_001074716.1

name	Rps24 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46519158 GeneID:20088 MGI:98147
definition	GO_component : GO:0005843 - cytosolic small ribosomal subunit (sensu Eukaryota) [Evidence ISS]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0003735 - structural constituent of ribosome [Evidence ISS] GO_process : GO:0006412 - protein biosynthesis [Evidence ISS]; GO:0007046 - ribosome biogenesis [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; MRP S24 product : ribosomal protein S24 isoform 2 protein_id : NP_997517.1

name	Rps24 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46519156 GeneID:20088 MGI:98147
definition	GO_component : GO:0005843 - cytosolic small ribosomal subunit (sensu Eukaryota) [Evidence ISS]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0003735 - structural constituent of ribosome [Evidence ISS] GO_process : GO:0006412 - protein biosynthesis [Evidence ISS]; GO:0007046 - ribosome biogenesis [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; MRP S24 product : ribosomal protein S24 isoform 1 protein_id : NP_035427.2

name	Rps24 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46519160 GeneID:20088 MGI:98147
definition	GO_component : GO:0005843 - cytosolic small ribosomal subunit (sensu Eukaryota) [Evidence ISS]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0003735 - structural constituent of ribosome [Evidence ISS] GO_process : GO:0006412 - protein biosynthesis [Evidence ISS]; GO:0007046 - ribosome biogenesis [Evidence IEA] codon_start : 1 note : isoform 3 is encoded by transcript variant 3; MRP S24 product : ribosomal protein S24 isoform 3 protein_id : NP_997518.1

name	LOC669315 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265352 GeneID:669315
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472872.1

name	I920194n01 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265326 GeneID:328364
definition	codon_start : 1 product : hypothetical protein LOC328364 protein_id : XP_001472101.1

name	LOC100039007 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265324 GeneID:100039007
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472076.1

name	Zmiz1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41053864 CCDS:CCDS26873.1 GeneID:328365 MGI:3040693
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : retinoic acid induced 17 protein_id : NP_899031.2

name	4931406H21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424914 GeneID:77592 MGI:1924842
definition	codon_start : 1 product : hypothetical protein LOC77592 protein_id : NP_780473.1

name	Ppif (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19527310 CCDS:CCDS26874.1 GeneID:105675 MGI:2145814
definition	EC_number : 5.2.1.8 GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0016853 - isomerase activity [Evidence IEA]; GO:0042277 - peptide binding [Evidence IEA] GO_process : GO:0006457 - protein folding [Evidence IEA] codon_start : 1 note : rotamase; cyclophilin F; peptidyl-prolyl cis-trans isomerase; cyclophilin D product : peptidylprolyl isomerase F protein_id : NP_598845.1

name	2310047A01Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94396733 GeneID:71918 MGI:1919168
definition	codon_start : 1 product : hypothetical protein LOC71918 protein_id : XP_980281.1

name	Anxa11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7304885 CCDS:CCDS26875.1 GeneID:11744 MGI:108481
definition	GO_component : GO:0005635 - nuclear envelope [Evidence ISS]; GO:0005654 - nucleoplasm [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IDA]; GO:0005544 - calcium-dependent phospholipid binding [Evidence IDA]; GO:0008429 - phosphatidylethanolamine binding [Evidence IDA]; GO:0005515 - protein binding [Evidence ISS] codon_start : 1 exception : mismatches in translation note : annexin XI product : annexin A11 protein_id : NP_038497.1

name	Plac9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46402209 GeneID:211623 MGI:2663998
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : placenta specific 9 protein_id : NP_997112.1

name	D14Ertd449e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313632 CCDS:CCDS26876.1 GeneID:66039 MGI:1196450
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : hypothetical protein LOC66039 protein_id : NP_079587.1

name	Cphx (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30425034 CCDS:CCDS26877.1 GeneID:105594 MGI:2145733
definition	GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA] GO_process : GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : cytoplasmic polyadenylated homeobox protein_id : NP_780551.1

name	1110051B16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34419645 CCDS:CCDS26878.1 GeneID:278672 MGI:1916048
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : hypothetical protein LOC278672 protein_id : NP_899245.1

name	LOC100039468 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265354 GeneID:100039468
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472991.1

name	LOC100039484 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265356 GeneID:100039484
definition	codon_start : 1 product : similar to Annexin A11 protein_id : XP_001473013.1

name	LOC100039335 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039335
definition	number : 5 pseudo : _no_value

name	LOC100039335 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039335
definition	number : 4 pseudo : _no_value

name	LOC100039335 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039335
definition	number : 3 pseudo : _no_value

name	LOC100039335 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039335
definition	number : 2 pseudo : _no_value

name	LOC100039335 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039335
definition	number : 1 pseudo : _no_value

name	LOC100039411 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039411
definition	number : 1 pseudo : _no_value

clone name	MSMg01-177H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274M05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-468A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070L04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-074N08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-189N01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-266B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-188G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-217H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-109K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466O04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-462I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089A23
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-291A07.b	B6Ng01-291A07.g
ACC	GA088015	GA088016
length	1,000	725
definition	B6Ng01-291A07.b	B6Ng01-291A07.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(25,834,811 - 25,835,807)	(25,710,741 - 25,711,465)
sequence	gaattcagctcctcagacttgcacagggcacccctcttcccctctgagtt actttgccagccccgagcctcaccttgtaaggatggcatctaaaatcccc tcccaaatggaagttgctttgtgtctatgactgcatttgctcaaccatcc aggagaaaggatttcatgctttccccctctctcttctatgtggcagacaa gctcagagtctaagtggtccagccagggtctcatagcacagatacagtga agctaggggtggctggggaggtgccaaggatgcttgcctgtgtagaatgt ctcaggaaggctctgaggcttcagcacctcagcctcctggctaattgttg acaggcttcctgggggaggacgtgatatatgcagccaagctctctctctc tctctctctctctctctctctctctctctctctctctctctctctctctc tctcccctctctccctccctctctctctctcccctctgctctcctcctcc tttcccccctcccctctccctccttgtctccctcctttcctccctgtcta gctttcctttcttgtaagcctgccatgaatcaggagagggagaggcacta aataaacagagatggattggggcagaggctctggagtggaatcggttttt tttttttttttttttttttttgcaaagctgccttttaccttcgccttttt ctgcaagctgccccttctcaggagcttcaaagaaaagactgcttccaagc atgatctttcgcccgagccaaaagccatttatctggaatattaatatgcc agcagctgcctgtgacagtgcctgccgctgatcacacaacgcccagcaca tgatccctcctgggatgctcaggaggctccaggaaactatggggccccct ggggcacattccagtatcttttgtttgtctttgccggagctttcttgcat tgctagccaagactgtctccagagtgacttctggggtggggacagggaca	gaattccatgcatgggtcaacctccagggttcagcaacttctgttcccag gagccagacagggacaaagctcaatctatacatctataaattcacccatc catgcatccataaattcatgcatgcatgcatctgtctgtccatccatcca gtccacaaactttattggcatttatggcatgctagaatttataaggccta gcaaggatattaagatggataagagtcatttgcgttgattgataccaact tacgtctccagtttcaaagctgacagctggagaggatgagggcagttcct ttgagcatgctgtagtgaccccatcccctatggggtttctggggaaggtg agaactagtacacagataggctggagcagggctccagatctggtgcctac ttcctttgtgccttggtagagttgcctaatttagtaaactcgatatattg aggatgagtatgtccttgtttagtgttggcaatattcttatataaacaaa atagattgaaagagaaatgatggaacagaaagggttaaatggagtggaga ttgggatagcagggtagaggaaagagcatggttaggaacaagaacaaaaa aacttttagaaaaatccatatggaaaactactactgtaaaagcttcctaa aatgtatatatatacatacaatgtacatatacaaaaggagtttaaatgga gttacactggggggtgggagggagg
quality values	Open. Hide. 47 31 35 24 58 25 23 39 62 62 62 62 62 33 37 56 54 56 62 62 62 39 56 42 47 62 49 49 47 62 59 62 62 62 50 50 45 50 45 28 32 33 54 62 62 62 62 59 62 59 62 59 62 62 62 62 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 49 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 59 59 59 62 62 54 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 54 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 49 62 62 62 62 49 49 49 38 38 43 46 46 50 27 27 36 43 43 40 46 46 46 44 43 43 43 35 34 43 39 34 25 26 39 41 51 43 50 38 43 43 45 45 45 50 31 34 34 27 22 27 31 50 51 51 38 38 56 38 42 42 31 31 32 42 42 32 31 37 29 38 39 51 56 56 56 39 38 39 38 38 37 56 56 56 56 31 32 27 27 27 30 33 39 38 51 33 51 24 27 24 30 23 23 56 47 56 39 39 56 42 43 39 33 40 38 27 33 38 38 39 42 56 50 50 56 56 38 38 47 56 33 24 43 35 35 46 43 52 50 43 39 47 47 47 39 42 46 18 27 47 31 31 47 38 54 43 42 41 43 47 52 42 39 34 28 12 47 52 33 52 39 34 41 52 50 54 26 45 49 41 35 37 35 35 33 28 40 46 52 52 42 33 45 30 54 39 48 52 54 39 31 44 36 43 40 42 52 42 58 22 49 46 39 46 47 35 47 47 26 27 39 13 52 50 42 46 32 43 33 27 25 30 24 15 15 12 24 25 32 32 24 33 48 50 47 34 15 25 24 12 9 12 28 16 19 15 24 23 26 13 10 15 14 28 34 30 15 16 16 7 18 18 28 25 18 15 14 35 31 40 22 16 24 13 10 19 13 16 9 13 19 23 32 25 23 18 23 10 9 11 19 18 16 6 40 12 7 17 15 15 13 22 29 28 6 22 49 27 32 13 14 23 25 18 7 11 8 11 15 16 14 6 12 13 7 32 36 26 24 26 26 24 9 9 17 35 32 16 40 8 26 27 30 26 50 32 27 21 33 15 39 37 53 19 37 12 27 27 24 24 32 15 14 4 11 13 24 15 18 18 40 33 20 17 17 37 32 10 23 26 26 26 17 13 19 14 9 31 20 23 13 32 33 19 18 6 23 25 30 10 12 6 14 46 19 18 32 6 29 8 14 21 19 9 21 18 11 9 15 16 6 6 21 17 32 32 16 12 12 19 28 25 16 7 22 26 15 32 10 31 22 24 15 10 12 9 11 16 17 12 28 16 15 14 15 13 29 19 12 13 12 14 7 20 9 20 23 30 31 32 22 30 22 18 15 34 32 9 9 8 12 17 26 18 8 17 11 31 9 7 27 19 25 31 12 20 16 24 17 20 17 25 18 32 17 13 15 8 10 6 17 7 9 6 32 29 16 32 23 21 13 31 19 33 26 16 31 14 6 12 18 9 29 11 7 13 9 10 13 27 9 15 33 13 21 6 16 11 23 18 13 8 10 7 11 17 39 17 22 6 13 31 29 10 7 5 13 7 16 18 6 9 15	Open. Hide. 62 59 59 59 62 62 59 43 62 62 59 41 51 59 38 28 48 38 40 45 50 56 62 62 59 59 62 62 54 54 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 59 62 59 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 54 62 62 62 62 59 62 62 59 59 62 59 59 62 62 62 62 59 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 54 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 59 59 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 58 58 54 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 42 42 58 58 58 58 54 49 58 54 58 58 58 58 58 54 58 54 58 54 58 58 58 58 52 58 49 58 54 58 58 58 58 51 51 54 54 58 58 50 54 58 50 58 54 49 53 54 54 47 54 58 54 51 58 58 58 41 58 39 58 51 58 58 51 52 58 54 50 58 53 54 58 58 58 58 58 50 50 51 49 58 39 51 58 53 58 49 42 58 58 58 42 53 53 53 58 58 32 51 58 43 40 49 51 50 47 58 52 58 51 58 49 51 50 54 40 54 51 44 29 51 49 54 45 41 54 40 51 53 54 32 51 30 44 42 44 29 39 51 45 52 54 52 40 44 50 42 42 44 44 26 35 47 28 49 21 32 53 51 54 54 54 54 42 26 54 33 31 40 18 54 52 23 10 7

Alignment Information

BAC End 1

BAC End 2

seq1: chr14_25834811_25835807
seq2: B6Ng01-291A07.b_46_1045 (reverse)

seq1  TGTCCCTGT-CCCACCCCAGAGGTC-CACTGGGGACATGCTTGGCTAGCA  48
      ||||||||| ||||||||||| ||| | |||| ||||  |||||||||||
seq2  TGTCCCTGTCCCCACCCCAGAAGTCACTCTGGAGACAGTCTTGGCTAGCA  50

seq1  ATTGCAAG-AAGCTCCGGCAAAGACAAACAAAAGGTAACTGGAATGTGCC  97
      | |||||| ||||||||||||||||||||||||| | |||||||||||||
seq2  A-TGCAAGAAAGCTCCGGCAAAGACAAACAAAAGAT-ACTGGAATGTGCC  98

seq1  CCAGGGGGCCCATTAGCTTCCTGGAGCCTCCTGAGCATTCCCAGGAGGGA  147
      |||||||||||  ||| |||||||||||||||||||| ||||||||||||
seq2  CCAGGGGGCCCCATAGTTTCCTGGAGCCTCCTGAGCA-TCCCAGGAGGGA  147

seq1  TCATG-GCTGGGCG-TGTGTGATCAGCGGCAGGCACTGTCACAGGCAGCT  195
      ||||| |||||||| |||||||||||||||||||||||||||||||||||
seq2  TCATGTGCTGGGCGTTGTGTGATCAGCGGCAGGCACTGTCACAGGCAGCT  197

seq1  GCTGGCATATTAATATTCCAGATAAATGGCTTTTGGCTCGGGCGAAAGAT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCATATTAATATTCCAGATAAATGGCTTTTGGCTCGGGCGAAAGAT  247

seq1  CCTGCTTGGGAGCAGGCTTTTCTTTGAAGCTCCTGAG-AGGGGCAGCTTG  294
      | ||||||| ||||| ||||||||||||||||||||| ||||||||||||
seq2  CATGCTTGGAAGCAGTCTTTTCTTTGAAGCTCCTGAGAAGGGGCAGCTTG  297

seq1  CAGAAAAAGGCGAAGGGAAAAGGCAGCTTTGCAAAAAAAAAAAAAAAAAA  344
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CAGAAAAAGGCGAAGGTAAAAGGCAGCTTTGCAAAAAAAAAAAAAAAAAA  347

seq1  AAAAAAAACCGATTCCACTCCAGAGCCTCTGCCCCAATCCATCTCTGTTT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAACCGATTCCACTCCAGAGCCTCTGCCCCAATCCATCTCTGTTT  397

seq1  ATTTAGTGCCTCTCCCTCTCCTGATTCATGGCAGGCTTACAAGAAAGGAA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGTGCCTCTCCCTCTCCTGATTCATGGCAGGCTTACAAGAAAGGAA  447

seq1  AGCTAGACAGGGAGGAAAGGAGGGAGACAAGGAGGGAGAGGGGAGGGGGG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGACAGGGAGGAAAGGAGGGAGACAAGGAGGGAGAGGGGAGGGGGG  497

seq1  AAAGGAGGAGGAGAGCAGAGGGGAGAGAGAGAGAGGGAGGGAGAGAGGGG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAGGAGGAGAGCAGAGGGGAGAGAGAGAGAGGGAGGGAGAGAGGGG  547

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  597

seq1  AGAGAGAGAGAGAGCTTGGCTGCATATATCACGTCCTCCCCCAGGAAGCC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGCTTGGCTGCATATATCACGTCCTCCCCCAGGAAGCC  647

seq1  TGTCAACAATTAGCCAGGAGGCTGAGGTGCTGAAGCCTCAGAGCCTTCCT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAACAATTAGCCAGGAGGCTGAGGTGCTGAAGCCTCAGAGCCTTCCT  697

seq1  GAGACATTCTACACAGGCAAGCATCCTTGGCACCTCCCCAGCCACCCCTA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACATTCTACACAGGCAAGCATCCTTGGCACCTCCCCAGCCACCCCTA  747

seq1  GCTTCACTGTATCTGTGCTATGAGACCCTGGCTGGACCACTTAGACTCTG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCACTGTATCTGTGCTATGAGACCCTGGCTGGACCACTTAGACTCTG  797

seq1  AGCTTGTCTGCCACATAGAAGAGAGAGGGGGAAAGCATGAAATCCTTTCT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGTCTGCCACATAGAAGAGAGAGGGGGAAAGCATGAAATCCTTTCT  847

seq1  CCTGGATGGTTGAGCAAATGCAGTCATAGACACAAAGCAACTTCCATTTG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGATGGTTGAGCAAATGCAGTCATAGACACAAAGCAACTTCCATTTG  897

seq1  GGAGGGGATTTTAGATGCCATCCTTACAAGGTGAGGCTCGGGGCTGGCAA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGGATTTTAGATGCCATCCTTACAAGGTGAGGCTCGGGGCTGGCAA  947

seq1  AGTAACTCAGAGGGGAAGAGGGGTGCCCTGTGCAAGTCTGAGGAGCTGAA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACTCAGAGGGGAAGAGGGGTGCCCTGTGCAAGTCTGAGGAGCTGAA  997

seq1  TTC  997
      |||
seq2  TTC  1000

seq1: chr14_25710741_25711465
seq2: B6Ng01-291A07.g_66_790

seq1  GAATTCCATGCATGGGTCAACCTCCAGGGTTCAGCAACTTCTGTTCCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGCATGGGTCAACCTCCAGGGTTCAGCAACTTCTGTTCCCAG  50

seq1  GAGCCAGACAGGGACAAAGCTCAATCTATACATCTATAAATTCACCCATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCAGACAGGGACAAAGCTCAATCTATACATCTATAAATTCACCCATC  100

seq1  CATGCATCCATAAATTCATGCATGCATGCATCTGTCTGTCCATCCATCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCATCCATAAATTCATGCATGCATGCATCTGTCTGTCCATCCATCCA  150

seq1  GTCCACAAACTTTATTGGCATTTATGGCATGCTAGAATTTATAAGGCCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCACAAACTTTATTGGCATTTATGGCATGCTAGAATTTATAAGGCCTA  200

seq1  GCAAGGATATTAAGATGGATAAGAGTCATTTGCGTTGATTGATACCAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGATATTAAGATGGATAAGAGTCATTTGCGTTGATTGATACCAACT  250

seq1  TACGTCTCCAGTTTCAAAGCTGACAGCTGGAGAGGATGAGGGCAGTTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGTCTCCAGTTTCAAAGCTGACAGCTGGAGAGGATGAGGGCAGTTCCT  300

seq1  TTGAGCATGCTGTAGTGACCCCATCCCCTATGGGGTTTCTGGGGAAGGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCATGCTGTAGTGACCCCATCCCCTATGGGGTTTCTGGGGAAGGTG  350

seq1  AGAACTAGTACACAGATAGGCTGGAGCAGGGCTCCAGATCTGGTGCCTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTAGTACACAGATAGGCTGGAGCAGGGCTCCAGATCTGGTGCCTAC  400

seq1  TTCCTTTGTGCCTTGGTAGAGTTGCCTAATTTAGTAAACTCGATATATTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTGTGCCTTGGTAGAGTTGCCTAATTTAGTAAACTCGATATATTG  450

seq1  AGGATGAGTATGTCCTTGTTTAGTGTTGGCAATATTCTTATATAAACAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGAGTATGTCCTTGTTTAGTGTTGGCAATATTCTTATATAAACAAA  500

seq1  ATAGATTGAAAGAGAAATGATGGAACAGAAAGGGTTAAATGGAGTGGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATTGAAAGAGAAATGATGGAACAGAAAGGGTTAAATGGAGTGGAGA  550

seq1  TTGGGATAGCAGGGTAGAGGAAAGAGCATGGTTAGGAACAAGAACAAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGATAGCAGGGTAGAGGAAAGAGCATGGTTAGGAACAAGAACAAAAA  600

seq1  AACTTTTAGAAAAATCCATATGGAAAACTACTACTGTAAAAGCTTCCTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTAGAAAAATCCATATGGAAAACTACTACTGTAAAAGCTTCCTAA  650

seq1  AATGTATATATATACATACAATGTACATATACAAAAGGAGTTTAAATGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTATATATATACATACAATGTACATATACAAAAGGAGTTTAAATGGA  700

seq1  GTTACACTGGGGGGTGGGAGGGAGG  725
      |||||||||||||||||||||||||
seq2  GTTACACTGGGGGGTGGGAGGGAGG  725

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BAC

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Alignment Information