BAC Information

Click to search

BAC

Clone NameB6Ng01-291H06
Chromosome14 (Build37)
Map Location 45,593,636 - 45,706,170
singlet/doubletdoublet
Overlap genePtger2, LOC100041591
Upstream geneEG666621, LOC100041356, LOC100041364, LOC100041371, LOC100041376, Ear-ps2, Ang-ps1, Ear2, LOC100041393, LOC100041422, EG666638, 4930503E14Rik, EG666647, EG624862, EG666660, EG666667, EG546250, EG666675, LOC100041494, LOC100041497, EG666678, LOC676402, BC061237, LOC434476, EG666707, LOC100042570, LOC666723, LOC673290, EG666725, EG624966, EG666744, Ptgdr
Downstream gene5730420B22Rik, LOC100041611, 6330416L11Rik, Ero1l, Psmc6, Styx, Gnpnat1, Plekhc1, EG382884, Ddhd1, EG637379, LOC666834, LOC100041685, LOC625377, LOC218963
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-291H06.bB6Ng01-291H06.g
ACCGA088333GA088334
length1,2091,075
definitionB6Ng01-291H06.b B6Ng01-291H06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(45,704,957 - 45,706,170)(45,593,636 - 45,594,707)
sequence
gaattccagaaagctgtctgtttctgccttcctgacactggttttacaga
tgtgtatctctgcacttagcttctgtctacatcagctatgagaccatttt
tccaaacagtattttatatccaccattgtgacacagatggtaaatgccta
ctatatattacctgagtaaatggatcagagactactcaaaagtgctcagt
gagttcatatactttattagagctttggaggcatcctattgacctcgttt
gactcacctcttcctggcaagcctccaaaccacttgcttttcctgacttc
tctatataagttcatggttctatcattcacccatgtgtaaaaccttagag
ttatttatttatgattttattagatcacacatatccactctacttcctca
cccatctttggttctttttgagatttttgttttctccttcattcaaccaa
caagtaagaccgttctggttagtcttttgtcaacttgacacaagctagag
tcatttgacaggggagaacctcaaatgagaaaattcacccatgagattgg
cttgagagcaagcctgtggcacgtttttcttgattaatgattgatagggg
aggttccagctcactgaaggtggtgccactcctcagcagatagtcctgga
aactataagaaagcaagatgagcaagccctagagaacaaggcagcactcc
ttcatggcctttgtttcagttcctacccctaggttcctgccctggcttcc
ttggatactggcctgtgatttttgaaatataagtgaattaaacccgttcc
ccgcccccccccccccaggttgtttctggttatggtgttttatcacaaca
atagaagcccaactaagacaatgactagagtcagagatagggccaagaat
cccaaatagaggtcgaaatatcttaaacagtagcaacattcttgatgttc
ttccttagtgatgccttgtagatttctagcctatcttcccttcctccatc
ggccctaatgacttctcaagactcctgcagagtctctgtcactcactagg
ccatagtctttactgaagccacagtaacgagattgacaaaacatctcttt
gctttttgtcatatagtctccttacctccaccgtctgctttctcctgctc
tgtggaaatcctgtgtaacctattattgtctattttcatggaactctttt
caggaacct
gaattccttccttctgtcagccttctttatctttatctgtgtgacgattt
ttcctccccaacagtatcgtgcgtactatggagcctttaaacttgagaac
agagctaaaggagactcagaagacctccaagccttgcgtttcctgtctgt
gatttccatagtggacccctggatcttcatcatcttcaggacttcagtat
tccggatgttatttcacaaggttttcacaagatctctgatctacagaaac
tggagcagccattcccggcaaagtaacgtggaatccactttgtgagggct
ttgcgtgttctgataagctgaaaatacagcacacattcaaagaaccttgg
ttgggaaagccttacaatttaaatccttaacaaaatctcccatgaggaac
tgataagatgtctcagcacttaagagcacgtactttttcttccagacggc
ctgggtttgattcccagcacccacatcatggcttatcagatggtacaaag
agataccacttttaactccagttccaaagggatctgacacctctagcctt
gatgtgcccctggactcctgtgcatataaccacacacacacatgcacgca
cacacacacacacacacacacacacacttaaaactaataaaagtaaattt
aaaatgtttcccacagttaagtcatctcttttcaaaggtatctgatttaa
ctatattttctcactctgtatctataaactgttttggtccttttaaaaag
tctgtgttcttaacagcaactaagatttgtatattgtaaacaaagttgat
ggtgttatggcaatgatcttaatcatcccaacatttgtactggatggtct
taaattttaaagcagtcttaaaaactatgagtttttatgaaaatatagta
ctgcttcactatttgggtattcttgaacaagccaagcaatggctcacaca
ttttttttccataaaaacctcttattttgtattatttttgctctcccctc
tgtctctctgtccctctgtccctctgtctatctctctgtctcctctgtct
ctcctctgtcctctgtctctctgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_45704957_45706170
seq2: B6Ng01-291H06.b_45_1253 (reverse)

seq1  AGGTTCCTGAAAAGAGTCCCATTGGAAATATGACCAAAATAAATAAGTCT  50
      ||||||||||||||||| ||| || ||||| ||| | ||||  |   |  
seq2  AGGTTCCTGAAAAGAGTTCCA-TGAAAATA-GACAATAATAGGT---TAC  45

seq1  ACAGGATTTCACAAGAAGCA-GAGAAAGCAGAC-GTTGAGGTAGAGGA-A  97
      |||||||||| ||   |||| |||||||||||| || |||||| |||| |
seq2  ACAGGATTTC-CACAGAGCAGGAGAAAGCAGACGGTGGAGGTA-AGGAGA  93

seq1  CTAATATGGACAAAAGCAAAGAGATG-TTTGTCAATTCTCGTTACTGT-G  145
      || |||||   ||||||||||||||| |||||||| |||||||||||| |
seq2  CT-ATATGACAAAAAGCAAAGAGATGTTTTGTCAA-TCTCGTTACTGTGG  141

seq1  CTTCAGTAAAGAACTATGGCCTAGTGAGTGGACAGAGACTCTGCAGGAGT  195
      ||||||||||| ||||||||||||||||| ||||||||||||||||||||
seq2  CTTCAGTAAAG-ACTATGGCCTAGTGAGT-GACAGAGACTCTGCAGGAGT  189

seq1  CTTGAGAAGTCATTA-GGCCGATGGAGGAAGGGAAGATAGGCTAGAAATC  244
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CTTGAGAAGTCATTAGGGCCGATGGAGGAAGGGAAGATAGGCTAGAAATC  239

seq1  TACAAGGCATCACTAAGGAAGAACATCAAGAATGTTGCTACTGTTTAAGA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGGCATCACTAAGGAAGAACATCAAGAATGTTGCTACTGTTTAAGA  289

seq1  TTATTTCGACCTCTATTTGGGATTCTTGGCCCTATCTCTGACTCTAGTCA  344
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TATTTCGACCTCTATTTGGGATTCTTGGCCCTATCTCTGACTCTAGTCA  338

seq1  TTGTCTTAGTTGGGCTTCTATTGTTGTGATAAAACACCATAACCAGAAAC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTAGTTGGGCTTCTATTGTTGTGATAAAACACCATAACCAGAAAC  388

seq1  AACCT-GGGGGGGGGGGGCGGGGAACGGGTTTAATTCACTTATATTTCAA  443
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGGGGGGGGGGGGGCGGGGAACGGGTTTAATTCACTTATATTTCAA  438

seq1  AAATCACAGGCCAGTATCCAAGGAAGCCAGGGCAGGAACCTAGGGGTAGG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCACAGGCCAGTATCCAAGGAAGCCAGGGCAGGAACCTAGGGGTAGG  488

seq1  AACTGAAACAAAGGCCATGAAGGAGTGCTGCCTTGTTCTCTAGGGCTTGC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAAACAAAGGCCATGAAGGAGTGCTGCCTTGTTCTCTAGGGCTTGC  538

seq1  TCATCTTGCTTTCTTATAGTTTCCAGGACTATCTGCTGAGGAGTGGCACC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTTGCTTTCTTATAGTTTCCAGGACTATCTGCTGAGGAGTGGCACC  588

seq1  ACCTTCAGTGAGCTGGAACCTCCCCTATCAATCATTAATCAAGAAAAACG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCAGTGAGCTGGAACCTCCCCTATCAATCATTAATCAAGAAAAACG  638

seq1  TGCCACAGGCTTGCTCTCAAGCCAATCTCATGGGTGAATTTTCTCATTTG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACAGGCTTGCTCTCAAGCCAATCTCATGGGTGAATTTTCTCATTTG  688

seq1  AGGTTCTCCCCTGTCAAATGACTCTAGCTTGTGTCAAGTTGACAAAAGAC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCTCCCCTGTCAAATGACTCTAGCTTGTGTCAAGTTGACAAAAGAC  738

seq1  TAACCAGAACGGTCTTACTTGTTGGTTGAATGAAGGAGAAAACAAAAATC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCAGAACGGTCTTACTTGTTGGTTGAATGAAGGAGAAAACAAAAATC  788

seq1  TCAAAAAGAACCAAAGATGGGTGAGGAAGTAGAGTGGATATGTGTGATCT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAAGAACCAAAGATGGGTGAGGAAGTAGAGTGGATATGTGTGATCT  838

seq1  AATAAAATCATAAATAAATAACTCTAAGGTTTTACACATGGGTGAATGAT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATCATAAATAAATAACTCTAAGGTTTTACACATGGGTGAATGAT  888

seq1  AGAACCATGAACTTATATAGAGAAGTCAGGAAAAGCAAGTGGTTTGGAGG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCATGAACTTATATAGAGAAGTCAGGAAAAGCAAGTGGTTTGGAGG  938

seq1  CTTGCCAGGAAGAGGTGAGTCAAACGAGGTCAATAGGATGCCTCCAAAGC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCAGGAAGAGGTGAGTCAAACGAGGTCAATAGGATGCCTCCAAAGC  988

seq1  TCTAATAAAGTATATGAACTCACTGAGCACTTTTGAGTAGTCTCTGATCC  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATAAAGTATATGAACTCACTGAGCACTTTTGAGTAGTCTCTGATCC  1038

seq1  ATTTACTCAGGTAATATATAGTAGGCATTTACCATCTGTGTCACAATGGT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACTCAGGTAATATATAGTAGGCATTTACCATCTGTGTCACAATGGT  1088

seq1  GGATATAAAATACTGTTTGGAAAAATGGTCTCATAGCTGATGTAGACAGA  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATAAAATACTGTTTGGAAAAATGGTCTCATAGCTGATGTAGACAGA  1138

seq1  AGCTAAGTGCAGAGATACACATCTGTAAAACCAGTGTCAGGAAGGCAGAA  1193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAGTGCAGAGATACACATCTGTAAAACCAGTGTCAGGAAGGCAGAA  1188

seq1  ACAGACAGCTTTCTGGAATTC  1214
      |||||||||||||||||||||
seq2  ACAGACAGCTTTCTGGAATTC  1209

seq1: chr14_45593636_45594707
seq2: B6Ng01-291H06.g_65_1139

seq1  GAATTCCTTCCTTCTGTCAGCCTTCTTTATCTTTATCTGTGTGACGATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCCTTCTGTCAGCCTTCTTTATCTTTATCTGTGTGACGATTT  50

seq1  TTCCTCCCCAACAGTATCGTGCGTACTATGGAGCCTTTAAACTTGAGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCCCAACAGTATCGTGCGTACTATGGAGCCTTTAAACTTGAGAAC  100

seq1  AGAGCTAAAGGAGACTCAGAAGACCTCCAAGCCTTGCGTTTCCTGTCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTAAAGGAGACTCAGAAGACCTCCAAGCCTTGCGTTTCCTGTCTGT  150

seq1  GATTTCCATAGTGGACCCCTGGATCTTCATCATCTTCAGGACTTCAGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCCATAGTGGACCCCTGGATCTTCATCATCTTCAGGACTTCAGTAT  200

seq1  TCCGGATGTTATTTCACAAGGTTTTCACAAGATCTCTGATCTACAGAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGGATGTTATTTCACAAGGTTTTCACAAGATCTCTGATCTACAGAAAC  250

seq1  TGGAGCAGCCATTCCCGGCAAAGTAACGTGGAATCCACTTTGTGAGGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCAGCCATTCCCGGCAAAGTAACGTGGAATCCACTTTGTGAGGGCT  300

seq1  TTGCGTGTTCTGATAAGCTGAAAATACAGCACACATTCAAAGAACCTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCGTGTTCTGATAAGCTGAAAATACAGCACACATTCAAAGAACCTTGG  350

seq1  TTGGGAAAGCCTTACAATTTAAATCCTTAACAAAATCTCCCATGAGGAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAAAGCCTTACAATTTAAATCCTTAACAAAATCTCCCATGAGGAAC  400

seq1  TGATAAGATGTCTCAGCACTTAAGAGCACGTACTTTTTCTTCCAGACGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAGATGTCTCAGCACTTAAGAGCACGTACTTTTTCTTCCAGACGGC  450

seq1  CTGGGTTTGATTCCCAGCACCCACATCATGGCTTATCAGATGGTACAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTTTGATTCCCAGCACCCACATCATGGCTTATCAGATGGTACAAAG  500

seq1  AGATACCACTTTTAACTCCAGTTCCAAAGGGATCTGACACCTCTAGCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACCACTTTTAACTCCAGTTCCAAAGGGATCTGACACCTCTAGCCTT  550

seq1  GATGTGCCCCTGGACTCCTGTGCATATAACCACACACACACATGCACGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGCCCCTGGACTCCTGTGCATATAACCACACACACACATGCACGCA  600

seq1  CACACACACACACACACACACACACACTTAAAACTAATAAAAGTAAATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACTTAAAACTAATAAAAGTAAATTT  650

seq1  AAAATGTTTCCCACAGTTAAGTCATCTCTTTTCAAAGGTATCTGATTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTTTCCCACAGTTAAGTCATCTCTTTTCAAAGGTATCTGATTTAA  700

seq1  CTATATTTTCTCACTCTGTATCTATAAACTGTTTTGGTCCTTTTAAAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATTTTCTCACTCTGTATCTATAAACTGTTTTGGTCCTTTTAAAAAG  750

seq1  TCTGTGTTCTTAACAGCAACTAAGATTTGTATATTGTAAACAAAGTTGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTTCTTAACAGCAACTAAGATTTGTATATTGTAAACAAAGTTGAT  800

seq1  GGTGTTATGGCAATGATCTTAATCATCCCAACATTTGTACTGGATGGTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTATGGCAATGATCTTAATCATCCCAACATTTGTACTGGATGGTCT  850

seq1  TAAATTTTAAAGCAGTCTTAAAAACTATGAGTTTTTATGAAAATATAGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTTAAAGCAGTCTTAAAAACTATGAGTTTTTATGAAAATATAGTA  900

seq1  CTGCTTCACTATTTGGGTATTCTTGAACAAGCCAAGCAATGGCTCACACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCACTATTTGGGTATTCTTGAACAAGCCAAGCAATGGCTCACACA  950

seq1  TTTTTTTTTCCAATAAAACCTCTTATTTTGTATTATTTTTGCTCT-CCCT  999
       |||||||||||  ||||||||||||||||||||||||||||||| ||||
seq2  -TTTTTTTTCCATAAAAACCTCTTATTTTGTATTATTTTTGCTCTCCCCT  999

seq1  CTGTCTCTCTGTCCCTCTGTCCCTCTGTCTATCTCTCTGTCT-CTCTGTC  1048
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CTGTCTCTCTGTCCCTCTGTCCCTCTGTCTATCTCTCTGTCTCCTCTGTC  1049

seq1  TCT-CTCTGT-CTCTGTCTCTCTGTC  1072
      ||| |||||| |||||||||||||||
seq2  TCTCCTCTGTCCTCTGTCTCTCTGTC  1075