BAC Information

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BAC

Clone NameB6Ng01-291K15
Chromosome14 (Build37)
Map Location 52,824,787 - 52,825,990
singlet/doubletsinglet
Overlap geneChd8
Upstream geneEar11, LOC100042187, EG633215, LOC100042203, LOC633238, EG638695, Vmn2r-ps110, LOC100042224, Vmn2r88, LOC100042247, V2r10, LOC100043041, EG434459, LOC100043031, LOC667289, EG545047, Ear-ps3, Ang4, Ear-ps4, AY358078, Hn1l-ps1, Ear-ps5, Ear6, Mett11d1, Slc39a2, Ndrg2, Gm77, Rnase13, E130112L23Rik, Zfp219, G630016D24Rik, LOC100042276, Olfr221, LOC667348, LOC667352, Hnrpc, Rpgrip1, Supt16h
Downstream geneRab2b, Tox4, Mettl3, Sall2, Olfr1513, LOC193533, Olfr1512, Olfr1511, Olfr1510, OTTMUSG00000015242, Olfr1509, Olfr1508, Olfr1507, LOC671621, EG633692, LOC100042372, EG667441, LOC100042384, Trav5-1, EG667449, LOC671652, Trav6-2, LOC100042410, LOC546612, LOC627394, LOC100042419, Gm701, LOC382180, EG386506, LOC667476, LOC671927, LOC667481, LOC100042444, LOC640196, LOC627273, LOC100043177, LOC640931, EG627232, LOC100043186, LOC100042470, EG328482, LOC100042479, EG667525, LOC100043197, LOC100038850, LOC667542, EG667547, LOC100043214, EG667562, LOC100043202, LOC667574, Gm26, EG667583, Gm1489, C920008G01Rik, LOC667596, EG667604, LOC547329, LOC639655, LOC634322, EG636127, OTTMUSG00000015163, EG667626, LOC620297, LOC100042560, EG667635, LOC100043218, LOC100042568, LOC100043204, EG627424, LOC100043258, LOC100042574
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-291K15.bB6Ng01-291K15.g
ACCGA088493GA088494
length1,210806
definitionB6Ng01-291K15.b B6Ng01-291K15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacctgcctgcctcttgcttcccaagaggtgtgcaccaccatgcc
cagaaaatttttattatacttgctttgtgtgcaagcatgtatatttttga
catgtgtgtctagtgcccaataaggtcaggaatggcatttcccctggaac
tggagttatggagagttgtttaccaccatgtgagtgctgggaaccaaacc
tatgtcctctgcaaaagcaacaagtattcttaaccactaagccatctctc
cagccccttatttattttttttaataaaaaaaaaaaaaaagaattcattg
tgaaaaggatttagtataggtgtagacacagtgtctgagtcaaaggggat
agcagaggcacgatgatgaaagtacctggcagttggcatgcactttataa
gagagagctgcctgctgtcctcactgtaagtttcaggaattataaaccat
ccacagcatagccaggtttcctgtcttctggtcaccattgctttcccttt
ccctgtcacaggtggacaaggcgtgagcaaactgatttctaccgagtagt
atctacctttggtgtggagtatgaccctgacaacatgcagtttcactggg
atcgcttccgcacttttgctcgcctggacaaaaaaacagatgaaagcctt
accaagtacttccatggttttgtggccatgtgtcgacaagtgtgccgcct
tcccccagctgctggtgatggtgagatggtagagtctagggtaaacgggt
ctgtgttgttaacacatcaacctttggttaatttcttttctcacctatgt
tggttgcagaacctccagaccctaatctgttcattgagcccatcactgaa
gagagagcctcgaggactctctaccgaattgagttgcttcgacgcttacg
ggaacaagttttatgccaccccttttagaagatcggctggcattgtgtca
gcctccaggtcttgaattgcccaaatggtgggatcctgtccgtcatgatg
gggagctcctacgaggagcagcccgcatgggggtgagcaaacagactgca
catcatgcaggacccagaacttctcttttttggctgcccgtatgaatata
ttgcagaaaccattcaaggcggggagcatcagctgcattccctgttcccg
aatgtttcacttccatgctgaacgagcatggtacttcacggtactgctta
cacatcaccc
gaattcactggccccaaagaaggacaggaaagtcaccatggaaagagaga
cagaggggagggggaagagaaagagagaaaatgcgtgcagagagagaaag
aaaaagggggcagagaaatcaaaaaagtctgaattatgcagggaggagcc
tctggggaaagcagctcagcccttgggttggaaagttcagggttggggtc
tggatgtgccaagtagggactgggggatgctgggagaacctggagaccag
gtcagcttcagtaagtaaaataaggacctcaggcccttgccccagtctga
aaccaacaccatttttccctatctacttgtttagatctttgggggtttct
ctgcgggtacattttattgctacgcttccaagtgcactgatcttttcttt
tgcagtatctagtctgcaactgtttaatgcatattttcacttggacctgt
cattttcatatctagattttgattgcatcgtcctctggtttccatttctt
tgctcagtttttgtacctttcctttactgagaacagctgctttcatgtgc
ttctgagctaacttgaacgtgtctgttctggcttgcctcatgcttcacta
acctctttatgggtcatattttcctgtctctttacatgcctaataatttg
ttgggatatgagatattgtgcattgtcacctcgtaggggctagatggttt
tgtttcttttttgttgttgttgtgttttctaaaaggccaaggattttttt
gtagaatgagatatggtgcagtgggaggggtgtcttggcaagctcatgct
gaggca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_52824787_52825990
seq2: B6Ng01-291K15.b_50_1259 (reverse)

seq1  GGGTGATGGTGAAGCAGTA-CGTGAGGTACACTGCTGGTGCAGCAGTGGA  49
      ||||||||   |||||||| ||||| ||||  |||| || |||||  | |
seq2  GGGTGATGTGTAAGCAGTACCGTGAAGTACCATGCTCGTTCAGCATGGAA  50

seq1  GTGGAGCA-TCGCG-ACAGGG-ATGCAGCTGATGCT-CCCGCCT--GATG  93
      ||| | || ||| | |||||| |||||||||||||| |||||||   |||
seq2  GTGAAACATTCGGGAACAGGGAATGCAGCTGATGCTCCCCGCCTTGAATG  100

seq1  G-TTCTGCATATA-ATTCATACGGGCAGCCAGAAAAGAGAAG-TCTGGGT  140
      | ||||||| ||| ||||||||||||||||| |||||||||| |||||||
seq2  GTTTCTGCA-ATATATTCATACGGGCAGCCAAAAAAGAGAAGTTCTGGGT  149

seq1  CCTGCATGATGTTGCAGTCTGTTTGGCTCACCCCATGGCGGGCTGCTCCT  190
      ||||||||||| |||||||||||| |||||||||   |||||||||||||
seq2  CCTGCATGATG-TGCAGTCTGTTT-GCTCACCCCCATGCGGGCTGCTCCT  197

seq1  CGTAGGAGCTCCCCATCATGACGGACAGGTTCCCACCATTTGGGCAATTC  240
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CGTAGGAGCTCCCCATCATGACGGACAGGATCCCACCATTTGGGCAATTC  247

seq1  AAGACCTGGAGGCTGACACAATGCCAGCCGATCTTCTAAAAGGGGGTGGC  290
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AAGACCTGGAGGCTGACACAATGCCAGCCGATCTTCTAAAA-GGGGTGGC  296

seq1  ATAAAACTTGTTCCCGTAAGCGTCGAAGCAACTCAATTCGGTAGAGAGTC  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAACTTGTTCCCGTAAGCGTCGAAGCAACTCAATTCGGTAGAGAGTC  346

seq1  CTCGAGGCTCTCTCTTCAGTGATGGGCTCAATGAACAGATTAGGGTCTGG  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGAGGCTCTCTCTTCAGTGATGGGCTCAATGAACAGATTAGGGTCTGG  396

seq1  AGGTTCTGCAACCAACATAGGTGAGAAAAGAAATTAACCAAAGGTTGATG  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCTGCAACCAACATAGGTGAGAAAAGAAATTAACCAAAGGTTGATG  446

seq1  TGTTAACAACACAGACCCGTTTACCCTAGACTCTACCATCTCACCATCAC  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAACAACACAGACCCGTTTACCCTAGACTCTACCATCTCACCATCAC  496

seq1  CAGCAGCTGGGGGAAGGCGGCACACTTGTCGACACATGGCCACAAAACCA  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGCTGGGGGAAGGCGGCACACTTGTCGACACATGGCCACAAAACCA  546

seq1  TGGAAGTACTTGGTAAGGCTTTCATCTGTTTTTTTGTCCAGGCGAGCAAA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGTACTTGGTAAGGCTTTCATCTGTTTTTTTGTCCAGGCGAGCAAA  596

seq1  AGTGCGGAAGCGATCCCAGTGAAACTGCATGTTGTCAGGGTCATACTCCA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCGGAAGCGATCCCAGTGAAACTGCATGTTGTCAGGGTCATACTCCA  646

seq1  CACCAAAGGTAGATACTACTCGGTAGAAATCAGTTTGCTCACGCCTTGTC  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAAGGTAGATACTACTCGGTAGAAATCAGTTTGCTCACGCCTTGTC  696

seq1  CACCTGTGACAGGGAAAGGGAAAGCAATGGTGACCAGAAGACAGGAAACC  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGTGACAGGGAAAGGGAAAGCAATGGTGACCAGAAGACAGGAAACC  746

seq1  TGGCTATGCTGTGGATGGTTTATAATTCCTGAAACTTACAGTGAGGACAG  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTATGCTGTGGATGGTTTATAATTCCTGAAACTTACAGTGAGGACAG  796

seq1  CAGGCAGCTCTCTCTTATAAAGTGCATGCCAACTGCCAGGTACTTTCATC  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAGCTCTCTCTTATAAAGTGCATGCCAACTGCCAGGTACTTTCATC  846

seq1  ATCGTGCCTCTGCTATCCCCTTTGACTCAGACACTGTGTCTACACCTATA  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTGCCTCTGCTATCCCCTTTGACTCAGACACTGTGTCTACACCTATA  896

seq1  CTAAATCCTTTTCACAATGAATTCTTTTTTTTTTTTTTTATTAAAAAAAA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATCCTTTTCACAATGAATTCTTTTTTTTTTTTTTTATTAAAAAAAA  946

seq1  TAAATAAGGGGCTGGAGAGATGGCTTAGTGGTTAAGAATACTTGTTGCTT  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAGGGGCTGGAGAGATGGCTTAGTGGTTAAGAATACTTGTTGCTT  996

seq1  TTGCAGAGGACATAGGTTTGGTTCCCAGCACTCACATGGTGGTAAACAAC  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGAGGACATAGGTTTGGTTCCCAGCACTCACATGGTGGTAAACAAC  1046

seq1  TCTCCATAACTCCAGTTCCAGGGGAAATGCCATTCCTGACCTTATTGGGC  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATAACTCCAGTTCCAGGGGAAATGCCATTCCTGACCTTATTGGGC  1096

seq1  ACTAGACACACATGTCAAAAATATACATGCTTGCACACAAAGCAAGTATA  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGACACACATGTCAAAAATATACATGCTTGCACACAAAGCAAGTATA  1146

seq1  ATAAAAATTTTCTGGGCATGGTGGTGCACACCTCTTGGGAAGCAAGAGGC  1190
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAATTTTCTGGGCATGGTGGTGCACACCTCTTGGGAAGCAAGAGGC  1196

seq1  AGGCAGGTGAATTC  1204
      ||||||||||||||
seq2  AGGCAGGTGAATTC  1210