BAC Information

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BAC

Clone NameB6Ng01-292G21
Chromosome14 (Build37)
Map Location 102,976,533 - 103,099,642
singlet/doubletdoublet
Overlap genenone
Upstream geneTbc1d4, Commd6, Uchl3, Lmo7, LOC100043795, LOC545567, LOC669278
Downstream geneKctd12, LOC668699, Irg1, Cln5, Fbxl3, LOC100043441, Phr1, LOC100043797, Scel, LOC100043448, Slain1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-292G21.bB6Ng01-292G21.g
ACCGA089073GA089074
length1,1751,090
definitionB6Ng01-292G21.b B6Ng01-292G21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(103,098,447 - 103,099,642)(102,976,533 - 102,977,615)
sequence
gaattcctattttgtatgtcaaaagaatagcatgatattgataatgttat
aacgtggttcatagctggggacatttgaaggagagtgtggctgcatctat
tttgattcaaagtaacagtagcaaaactacaatctgaaggcaaaaagcac
aagtcataaagactggcatattttatgcgtatttaaggcatatttgaaat
tcaaataagttgcaaaaaagcaaaacagcaagctaattttttttatctat
ttagaattcaaatatagttttgcctccctgacttaaaattgcacaagaag
acactggtaatgtgtacaaatatttggggacagtgcagggacacccagtc
aaattaaaaagcatcaattatattagtgagaatttgtatgatattttgtt
tattagattttaaatttttttcctgttcttgaggtcttggttctattcta
acagaattttggtaagtgatcaaggcacatacgtgtgacatactaaaatt
gatcccagagagtttagtaaaactctaaagaatttagtaaaggtctacta
caagccagtaaaagagaatacacttaaacatgttttcttttgctgaagcc
ctttgggaaaaactgatctaacttttttattctaagtaattaaagaaagc
ttctgtgagtgaccggtctgctctgtgctctggtgactgttctgatccat
ggagcgctttccatagatcgattttagatttaagtgagaatctgtaaggt
gtttaaaatgaatgggcaaagtcttgctgtttatagactgggggctggca
cctattctgcctgccagtgtaagtgggttgcatcgcaggcttgggagaat
agagccatggcttttgtgagcaccctaagcagtgattgtcaacatggcta
tccctacacacacacacacacacacacacacacacacacacacacacaca
cacacacacacacaggcaaacacttctattgctgtgcaggaaatggaagc
accctaccatctagtataaccttgctttgttcattatctaaatagccaca
atgacatcaggtatgagaaatgatattcatggagagaaaagagcaaaacg
aattagaccttggttaaaccggaggagtactcatgtacaaagatcatcaa
atgtgtgctcctggacagtctctcc
gaattctaggaagaagatgggccattaccattccatttccacatggcggt
attctcaaaggtgccgtgagggaggaagtctgcagtaagagtaattttct
aaacaatgctctgaggacgcgcaaggacatgcttagttaaagtgtgccat
gactcacaatggaaagtagaaatcttgacctacattttaaagatggttta
agaggaaaatgttttctttttcacacttttctagtgtgcaaaagaaaaca
ttgaagtttccttatgccctttgtctgagaaaacagctgagtttgaaaat
agagatacattttgcatatacatatattccttatgattttcatctgttcc
cctgttgatagatacctaagctgatgccataacttggccattgggaataa
aaggatgaaatgatattatttgcagtaaaaatcggttgagctggggccca
cattcagcaaattaaggcaaactcaaaaagacaaatatctcatgttttca
agcacatgtgcaggcatgcatacacacacacaagaggggaaagagagaga
gagagagagatgttttaaacatctttcttttgtagatgttgaaagaatgt
gagtagacacaacttgtttgcaaaagtaaatgtctcatgtaagccagtga
ttcatgttacacctagaatgtttttgaatattctggtgcttatttcattc
accccttttccttcatcctttggagcacacttgatttcaaaccagagtcc
cttttaggcaaataggattggttaatgcatgcacagctaaaacatcagaa
gagattccctactcaatccagagtgacttgaagccaaaggtagttgccag
tcttgctaggaaagtgtctacttcattcaacctttaaatattagtttcat
gggtatgcactcactgataagtggatattagcccagaagctcagaatacc
caagatacatttgcaaaacacatgaaactcacaaggaaagaaaatcaagg
tgtggattacatcgattccttcttagaaggcgaacaaaacatcctatggt
aggagttaacaaagtgtgggagccagaagacttaaggcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_103098447_103099642
seq2: B6Ng01-292G21.b_44_1218 (reverse)

seq1  GGAGA-ACTGT-CAGGAGACCACATATTGATGACTCCTTTTGTACATGAG  48
      ||||| ||||| ||||||  ||||| ||||||| ||  ||||||||||||
seq2  GGAGAGACTGTCCAGGAGCACACAT-TTGATGA-TC--TTTGTACATGAG  46

seq1  TACTCCCTCCGGGTTTTAACCCAAGTGTTCTAAATTCTGTTTTTGCTCTT  98
      |||| |||||||  ||||||| | || |    |||||   ||||||||||
seq2  TACT-CCTCCGG--TTTAACCAAGGTCT----AATTC--GTTTTGCTCTT  87

seq1  TTTTTCCTTCTCATGAATATCATTTTCCTCATACCCTGATGTCATTGTGG  148
      ||    ||   ||||||||||||||  |||||| ||||||||||||||||
seq2  TT----CTCTCCATGAATATCATTT--CTCATA-CCTGATGTCATTGTGG  130

seq1  CTATTTTAGATAATGAACAAAGCAAGGTTAATACTTAGATGGTAGGGTGC  198
      ||| ||||||||||||||||||||||||| |||| |||||||||||||||
seq2  CTA-TTTAGATAATGAACAAAGCAAGGTT-ATAC-TAGATGGTAGGGTGC  177

seq1  TTCCATTTCCTGCACAGCAAT-GGAGTGTTTTGCCTGTGTGTGTGTGTGT  247
      ||||||||||||||||||||| | |||| |||||||||||||||||||||
seq2  TTCCATTTCCTGCACAGCAATAGAAGTG-TTTGCCTGTGTGTGTGTGTGT  226

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGGAT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGGAT  276

seq1  AGCCATGTTGACAATCACTGCTTAGGGTGCTCACAAAAGCCATGGCTCTA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATGTTGACAATCACTGCTTAGGGTGCTCACAAAAGCCATGGCTCTA  326

seq1  TTCTCCCAAGCCTGCGATGCAACCCACTTACACTGGCAGGCAGAATAGGT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCCAAGCCTGCGATGCAACCCACTTACACTGGCAGGCAGAATAGGT  376

seq1  GCCAGCCCCCAGTCTATAAACAGCAAGACTTTGCCCATTCATTTTAAACA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCCCCCAGTCTATAAACAGCAAGACTTTGCCCATTCATTTTAAACA  426

seq1  CCTTACAGATTCTCACTTAAATCTAAAATCGATCTATGGAAAGCGCTCCA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTACAGATTCTCACTTAAATCTAAAATCGATCTATGGAAAGCGCTCCA  476

seq1  TGGATCAGAACAGTCACCAGAGCACAGAGCAGACCGGTCACTCACAGAAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCAGAACAGTCACCAGAGCACAGAGCAGACCGGTCACTCACAGAAG  526

seq1  CTTTCTTTAATTACTTAGAATAAAAAAGTTAGATCAGTTTTTCCCAAAGG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTAATTACTTAGAATAAAAAAGTTAGATCAGTTTTTCCCAAAGG  576

seq1  GCTTCAGCAAAAGAAAACATGTTTAAGTGTATTCTCTTTTACTGGCTTGT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCAGCAAAAGAAAACATGTTTAAGTGTATTCTCTTTTACTGGCTTGT  626

seq1  AGTAGACCTTTACTAAATTCTTTAGAGTTTTACTAAACTCTCTGGGATCA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGACCTTTACTAAATTCTTTAGAGTTTTACTAAACTCTCTGGGATCA  676

seq1  ATTTTAGTATGTCACACGTATGTGCCTTGATCACTTACCAAAATTCTGTT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAGTATGTCACACGTATGTGCCTTGATCACTTACCAAAATTCTGTT  726

seq1  AGAATAGAACCAAGACCTCAAGAACAGGAAAAAAATTTAAAATCTAATAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAGAACCAAGACCTCAAGAACAGGAAAAAAATTTAAAATCTAATAA  776

seq1  ACAAAATATCATACAAATTCTCACTAATATAATTGATGCTTTTTAATTTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATATCATACAAATTCTCACTAATATAATTGATGCTTTTTAATTTG  826

seq1  ACTGGGTGTCCCTGCACTGTCCCCAAATATTTGTACACATTACCAGTGTC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGTGTCCCTGCACTGTCCCCAAATATTTGTACACATTACCAGTGTC  876

seq1  TTCTTGTGCAATTTTAAGTCAGGGAGGCAAAACTATATTTGAATTCTAAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTGCAATTTTAAGTCAGGGAGGCAAAACTATATTTGAATTCTAAA  926

seq1  TAGATAAAAAAAATTAGCTTGCTGTTTTGCTTTTTTGCAACTTATTTGAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAAAAAAAATTAGCTTGCTGTTTTGCTTTTTTGCAACTTATTTGAA  976

seq1  TTTCAAATATGCCTTAAATACGCATAAAATATGCCAGTCTTTATGACTTG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAATATGCCTTAAATACGCATAAAATATGCCAGTCTTTATGACTTG  1026

seq1  TGCTTTTTGCCTTCAGATTGTAGTTTTGCTACTGTTACTTTGAATCAAAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTTGCCTTCAGATTGTAGTTTTGCTACTGTTACTTTGAATCAAAA  1076

seq1  TAGATGCAGCCACACTCTCCTTCAAATGTCCCCAGCTATGAACCACGTTA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGCAGCCACACTCTCCTTCAAATGTCCCCAGCTATGAACCACGTTA  1126

seq1  TAACATTATCAATATCATGCTATTCTTTTGACATACAAAATAGGAATTC  1196
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATTATCAATATCATGCTATTCTTTTGACATACAAAATAGGAATTC  1175

seq1: chr14_102976533_102977615
seq2: B6Ng01-292G21.g_64_1153

seq1  GAATTCTAGGAAGAAGATGGGCCATTACCATTCCATTTCCACATGGCGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGAAGAAGATGGGCCATTACCATTCCATTTCCACATGGCGGT  50

seq1  ATTCTCAAAGGTGCCGTGAGGGAGGAAGTCTGCAGTAAGAGTAATTTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCAAAGGTGCCGTGAGGGAGGAAGTCTGCAGTAAGAGTAATTTTCT  100

seq1  AAACAATGCTCTGAGGACGCGCAAGGACATGCTTAGTTAAAGTGTGCCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATGCTCTGAGGACGCGCAAGGACATGCTTAGTTAAAGTGTGCCAT  150

seq1  GACTCACAATGGAAAGTAGAAATCTTGACCTACATTTTAAAGATGGTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCACAATGGAAAGTAGAAATCTTGACCTACATTTTAAAGATGGTTTA  200

seq1  AGAGGAAAATGTTTTCTTTTTCACACTTTTCTAGTGTGCAAAAGAAAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAAAATGTTTTCTTTTTCACACTTTTCTAGTGTGCAAAAGAAAACA  250

seq1  TTGAAGTTTCCTTATGCCCTTTGTCTGAGAAAACAGCTGAGTTTGAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGTTTCCTTATGCCCTTTGTCTGAGAAAACAGCTGAGTTTGAAAAT  300

seq1  AGAGATACATTTTGCATATACATATATTCCTTATGATTTTCATCTGTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATACATTTTGCATATACATATATTCCTTATGATTTTCATCTGTTCC  350

seq1  CCTGTTGATAGATACCTAAGCTGATGCCATAACTTGGCCATTGGGAATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTGATAGATACCTAAGCTGATGCCATAACTTGGCCATTGGGAATAA  400

seq1  AAGGATGAAATGATATTATTTGCAGTAAAAATCGGTTGAGCTGGGGCCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATGAAATGATATTATTTGCAGTAAAAATCGGTTGAGCTGGGGCCCA  450

seq1  CATTCAGCAAATTAAGGCAAACTCAAAAAGACAAATATCTCATGTTTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAGCAAATTAAGGCAAACTCAAAAAGACAAATATCTCATGTTTTCA  500

seq1  AGCACATGTGCAGGCATGCATACACACACACAAGAGGGGAAAGAGAGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACATGTGCAGGCATGCATACACACACACAAGAGGGGAAAGAGAGAGA  550

seq1  GAGAGAGAGATGTTTTAAACATCTTTCTTTTGTAGATGTTGAAAGAATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGATGTTTTAAACATCTTTCTTTTGTAGATGTTGAAAGAATGT  600

seq1  GAGTAGACACAACTTGTTTGCAAAAGTAAATGTCTCATGTAAGCCAGTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGACACAACTTGTTTGCAAAAGTAAATGTCTCATGTAAGCCAGTGA  650

seq1  TTCATGTTACACCTAGAATGTTTTTGAATATTCTGGTGCTTATTTCATTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGTTACACCTAGAATGTTTTTGAATATTCTGGTGCTTATTTCATTC  700

seq1  ACCCCTTTTCCTTCATCCTTTGGAGCACACTTGATTTCAAACCAGAGTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTTTTCCTTCATCCTTTGGAGCACACTTGATTTCAAACCAGAGTCC  750

seq1  CTTTTAGGCAAATAGGATTGGTTAATGCATGCACAGCTAAAACATCAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAGGCAAATAGGATTGGTTAATGCATGCACAGCTAAAACATCAGAA  800

seq1  GAGATTCCCTACTCAATCCAGAGTGACTTGAAGCC-AAGGTAGTTGCCAG  849
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GAGATTCCCTACTCAATCCAGAGTGACTTGAAGCCAAAGGTAGTTGCCAG  850

seq1  TCTTGCTAGGAAAGTGTCTACTTCATTCAACCTTTAAATATTAGTTTCAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCTAGGAAAGTGTCTACTTCATTCAACCTTTAAATATTAGTTTCAT  900

seq1  -GGTATGCACTCACTGATAAGTGGATATTAGCCCAGAAGCTCAGAATACC  948
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATGCACTCACTGATAAGTGGATATTAGCCCAGAAGCTCAGAATACC  950

seq1  CAAGATACAATTTGCAAAACACATGAAACTCACAAAGAAAGAAAATCAAA  998
      |||||||| |||||||||||||||||||||||||| ||||||||||||| 
seq2  CAAGATAC-ATTTGCAAAACACATGAAACTCACAAGGAAAGAAAATCAAG  999

seq1  GTGTGGA-TACATCGA-TCCTTCTTAGAAGGCGGAACAAAACA-CCCATG  1045
      ||||||| |||||||| ||||||||||||||| |||||||||| || |||
seq2  GTGTGGATTACATCGATTCCTTCTTAGAAGGC-GAACAAAACATCCTATG  1048

seq1  GAAGGAGTT-ACAAAGTGT-GGAG-CAG-AGACTTAAGGCAT  1083
      | ||||||| ||||||||| |||| ||| |||||||||||||
seq2  GTAGGAGTTAACAAAGTGTGGGAGCCAGAAGACTTAAGGCAT  1090